RNA–Protein interactions for RNA: ENST00000544365.5

ECHDC2-225, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 5

Gene ECHDC2, Length 1,335 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-225	ENST00000544365	RAPGEF2	Q9Y4G8	1499 aa		34.28	■■■■□ 3.08
ECHDC2-225	ENST00000544365	JPH4	Q96JJ6	628 aa		34.28	■■■■□ 3.08
ECHDC2-225	ENST00000544365	KIAA0586	Q9BVV6	1533 aa		34.27	■■■■□ 3.08
ECHDC2-225	ENST00000544365	ERCC6L2	Q5T890	1561 aa		34.2	■■■■□ 3.06
ECHDC2-225	ENST00000544365	PRG4	Q92954	1404 aa	Predicted RBP	34.18	■■■■□ 3.06
ECHDC2-225	ENST00000544365	EEA1	Q15075	1411 aa		34.17	■■■■□ 3.06
ECHDC2-225	ENST00000544365	CSRNP3	Q8WYN3	585 aa		34.17	■■■■□ 3.06
ECHDC2-225	ENST00000544365	PRX	Q9BXM0	1461 aa		34.15	■■■■□ 3.06
ECHDC2-225	ENST00000544365	IQGAP2	Q13576	1575 aa		34.06	■■■■□ 3.04
ECHDC2-225	ENST00000544365	FAM9A	Q8IZU1	332 aa	Predicted RBP	34.02	■■■■□ 3.04
ECHDC2-225	ENST00000544365	CTTNBP2	Q8WZ74	1663 aa		33.95	■■■■□ 3.03
ECHDC2-225	ENST00000544365	CARMIL2	Q6F5E8	1435 aa		33.91	■■■■□ 3.02
ECHDC2-225	ENST00000544365	UGGT2	Q9NYU1	1516 aa		33.88	■■■■□ 3.01
ECHDC2-225	ENST00000544365	DISP1	Q96F81	1524 aa		33.82	■■■■□ 3
ECHDC2-225	ENST00000544365	TNIK	Q9UKE5	1360 aa		33.8	■■■■□ 3
ECHDC2-225	ENST00000544365	KIF21B	O75037	1637 aa		33.79	■■■■□ 3
ECHDC2-225	ENST00000544365	PTPRG	P23470	1445 aa		33.78	■■■■□ 3
ECHDC2-225	ENST00000544365	KIAA0556	O60303	1618 aa		33.72	■■■□□ 2.99
ECHDC2-225	ENST00000544365	GOLGA3	Q08378	1498 aa		33.7	■■■□□ 2.99
ECHDC2-225	ENST00000544365	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.69	■■■□□ 2.98
ECHDC2-225	ENST00000544365	TRH	P20396	242 aa	Predicted RBP	33.64	■■■□□ 2.98
ECHDC2-225	ENST00000544365	ADCY10	Q96PN6	1610 aa		33.64	■■■□□ 2.98
ECHDC2-225	ENST00000544365	NPM1	P06748	294 aa	Known RBP eCLIP	33.61	■■■□□ 2.97
ECHDC2-225	ENST00000544365	UBTF	P17480	764 aa	Known RBP	33.55	■■■□□ 2.96
ECHDC2-225	ENST00000544365	EHMT2	Q96KQ7	1210 aa		33.55	■■■□□ 2.96
ECHDC2-225	ENST00000544365	UACA	Q9BZF9	1416 aa		33.54	■■■□□ 2.96
ECHDC2-225	ENST00000544365	UHRF1BP1L	A0JNW5	1464 aa		33.52	■■■□□ 2.96
ECHDC2-225	ENST00000544365	SAMD9	Q5K651	1589 aa		33.5	■■■□□ 2.95
ECHDC2-225	ENST00000544365	P3H3	Q8IVL6	736 aa		33.49	■■■□□ 2.95
ECHDC2-225	ENST00000544365	RANGAP1	P46060	587 aa	Predicted RBP	33.47	■■■□□ 2.95
ECHDC2-225	ENST00000544365	ABCC2	Q92887	1545 aa		33.46	■■■□□ 2.95
ECHDC2-225	ENST00000544365	MAPKBP1	O60336	1514 aa		33.44	■■■□□ 2.94
ECHDC2-225	ENST00000544365	PLB1	Q6P1J6	1458 aa		33.4	■■■□□ 2.94
ECHDC2-225	ENST00000544365	ABCA8	O94911	1581 aa		33.36	■■■□□ 2.93
ECHDC2-225	ENST00000544365	EFCAB5	A4FU69	1503 aa		33.36	■■■□□ 2.93
ECHDC2-225	ENST00000544365	KDM5B	Q9UGL1	1544 aa		33.36	■■■□□ 2.93
ECHDC2-225	ENST00000544365	KIF13A	Q9H1H9	1805 aa		33.3	■■■□□ 2.92
ECHDC2-225	ENST00000544365	ABCC10	Q5T3U5	1492 aa		33.3	■■■□□ 2.92
ECHDC2-225	ENST00000544365	FHOD3	Q2V2M9	1422 aa		33.29	■■■□□ 2.92
ECHDC2-225	ENST00000544365	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.27	■■■□□ 2.92
ECHDC2-225	ENST00000544365	ASXL2	Q76L83	1435 aa		33.25	■■■□□ 2.91
ECHDC2-225	ENST00000544365	FAM69C	Q0P6D2	419 aa		33.25	■■■□□ 2.91
ECHDC2-225	ENST00000544365	DIP2B	Q9P265	1576 aa		33.22	■■■□□ 2.91
ECHDC2-225	ENST00000544365	RAPGEF6	Q8TEU7	1601 aa		33.19	■■■□□ 2.9
ECHDC2-225	ENST00000544365	ARHGAP35	Q9NRY4	1499 aa		33.19	■■■□□ 2.9
ECHDC2-225	ENST00000544365	ATP10B	O94823	1461 aa		33.11	■■■□□ 2.89
ECHDC2-225	ENST00000544365	ARID3C	A6NKF2	412 aa		33.08	■■■□□ 2.89
ECHDC2-225	ENST00000544365	WDR7	Q9Y4E6	1490 aa		33.07	■■■□□ 2.88
ECHDC2-225	ENST00000544365	FMN1	Q68DA7	1419 aa		33.07	■■■□□ 2.88
ECHDC2-225	ENST00000544365	GLI2	P10070	1586 aa		33.07	■■■□□ 2.88
ECHDC2-225	ENST00000544365	NUP153	P49790	1475 aa	Known RBP	33.06	■■■□□ 2.88
ECHDC2-225	ENST00000544365	EPRS	P07814	1512 aa	Known RBP	33.05	■■■□□ 2.88
ECHDC2-225	ENST00000544365	CLIP1	P30622	1438 aa		32.99	■■■□□ 2.87
ECHDC2-225	ENST00000544365	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.99	■■■□□ 2.87
ECHDC2-225	ENST00000544365	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.99	■■■□□ 2.87
ECHDC2-225	ENST00000544365	TSPOAP1	O95153	1857 aa		32.97	■■■□□ 2.87
ECHDC2-225	ENST00000544365	KCNH8	Q96L42	1107 aa		32.97	■■■□□ 2.87
ECHDC2-225	ENST00000544365	LOC105371045	A0A1W2PR82	267 aa		32.95	■■■□□ 2.86
ECHDC2-225	ENST00000544365	MAP3K4	Q9Y6R4	1608 aa		32.9	■■■□□ 2.86
ECHDC2-225	ENST00000544365	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.9	■■■□□ 2.86
ECHDC2-225	ENST00000544365	HECW1	Q76N89	1606 aa		32.89	■■■□□ 2.86
ECHDC2-225	ENST00000544365	PLEKHD1	A6NEE1	506 aa		32.87	■■■□□ 2.85
ECHDC2-225	ENST00000544365	PPRC1	Q5VV67	1664 aa	Known RBP	32.84	■■■□□ 2.85
ECHDC2-225	ENST00000544365	CEP162	Q5TB80	1403 aa		32.84	■■■□□ 2.85
ECHDC2-225	ENST00000544365	CFAP43	Q8NDM7	1665 aa		32.82	■■■□□ 2.84
ECHDC2-225	ENST00000544365	CDK13	Q14004	1512 aa	Known RBP	32.82	■■■□□ 2.84
ECHDC2-225	ENST00000544365	CASKIN1	Q8WXD9	1431 aa		32.8	■■■□□ 2.84
ECHDC2-225	ENST00000544365	CD109	Q6YHK3	1445 aa		32.79	■■■□□ 2.84
ECHDC2-225	ENST00000544365	PCF11	O94913	1555 aa	Known RBP	32.76	■■■□□ 2.83
ECHDC2-225	ENST00000544365	TEX14	Q8IWB6	1497 aa		32.76	■■■□□ 2.83
ECHDC2-225	ENST00000544365	ABCA9	Q8IUA7	1624 aa		32.74	■■■□□ 2.83
ECHDC2-225	ENST00000544365	LRRIQ1	Q96JM4	1722 aa		32.73	■■■□□ 2.83
ECHDC2-225	ENST00000544365	MAGI3	Q5TCQ9	1506 aa		32.73	■■■□□ 2.83
ECHDC2-225	ENST00000544365	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.73	■■■□□ 2.83
ECHDC2-225	ENST00000544365	FYCO1	Q9BQS8	1478 aa		32.71	■■■□□ 2.83
ECHDC2-225	ENST00000544365	KDM6B	O15054	1643 aa		32.7	■■■□□ 2.83
ECHDC2-225	ENST00000544365	CCDC18	Q5T9S5	1454 aa		32.66	■■■□□ 2.82
ECHDC2-225	ENST00000544365	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.6	■■■□□ 2.81
ECHDC2-225	ENST00000544365	TRO	Q12816	1431 aa	Predicted RBP	32.58	■■■□□ 2.81
ECHDC2-225	ENST00000544365	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.55	■■■□□ 2.8
ECHDC2-225	ENST00000544365	TTC37	Q6PGP7	1564 aa		32.52	■■■□□ 2.8
ECHDC2-225	ENST00000544365	PHLDB1	Q86UU1	1377 aa		32.51	■■■□□ 2.8
ECHDC2-225	ENST00000544365	KIF14	Q15058	1648 aa		32.49	■■■□□ 2.79
ECHDC2-225	ENST00000544365	NEO1	Q92859	1461 aa		32.48	■■■□□ 2.79
ECHDC2-225	ENST00000544365	ARAP3	Q8WWN8	1544 aa		32.45	■■■□□ 2.79
ECHDC2-225	ENST00000544365	VPS8	Q8N3P4	1428 aa		32.45	■■■□□ 2.79
ECHDC2-225	ENST00000544365	PLCH2	O75038	1416 aa		32.43	■■■□□ 2.78
ECHDC2-225	ENST00000544365	FANCA	O15360	1455 aa		32.4	■■■□□ 2.78
ECHDC2-225	ENST00000544365	MYO5C	Q9NQX4	1742 aa		32.4	■■■□□ 2.78
ECHDC2-225	ENST00000544365	CFAP74	Q9C0B2	1584 aa		32.38	■■■□□ 2.77
ECHDC2-225	ENST00000544365	AKNA	Q7Z591	1439 aa		32.36	■■■□□ 2.77
ECHDC2-225	ENST00000544365	MTUS2	Q5JR59	1369 aa		32.35	■■■□□ 2.77
ECHDC2-225	ENST00000544365	EFCAB2	Q5VUJ9	269 aa		32.33	■■■□□ 2.77
ECHDC2-225	ENST00000544365	RAPGEF3	O95398	923 aa		32.28	■■■□□ 2.76
ECHDC2-225	ENST00000544365	CDC42BPB	Q9Y5S2	1711 aa		32.26	■■■□□ 2.76
ECHDC2-225	ENST00000544365	ARHGAP5	Q13017	1502 aa		32.25	■■■□□ 2.75
ECHDC2-225	ENST00000544365	TIAM1	Q13009	1591 aa		32.25	■■■□□ 2.75
ECHDC2-225	ENST00000544365	DENND4B	O75064	1496 aa	Predicted RBP	32.25	■■■□□ 2.75
ECHDC2-225	ENST00000544365	EHBP1L1	Q8N3D4	1523 aa		32.25	■■■□□ 2.75
ECHDC2-225	ENST00000544365	PREX2	Q70Z35	1606 aa		32.23	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms