RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 CCNB3Q8WWL7 1395 aa26.42■■□□□ 1.82
SCARB1-208ENST00000544327 DIEXFQ68CQ4 756 aaKnown RBP26.4■■□□□ 1.82
SCARB1-208ENST00000544327 ZNF316A6NFI3 1004 aaPredicted RBP26.39■■□□□ 1.81
SCARB1-208ENST00000544327 LRRC9Q6ZRR7 1453 aa26.38■■□□□ 1.81
SCARB1-208ENST00000544327 PCF11O94913 1555 aaKnown RBP26.37■■□□□ 1.81
SCARB1-208ENST00000544327 AQRO60306 1485 aaKnown RBP eCLIP26.35■■□□□ 1.817e-7■■■■■ 33.9
SCARB1-208ENST00000544327 DHX57Q6P158 1386 aaKnown RBP26.35■■□□□ 1.81
SCARB1-208ENST00000544327 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
SCARB1-208ENST00000544327 FYCO1Q9BQS8 1478 aa26.32■■□□□ 1.8
SCARB1-208ENST00000544327 GAPVD1Q14C86 1478 aa26.28■■□□□ 1.8
SCARB1-208ENST00000544327 CASKIN1Q8WXD9 1431 aa26.28■■□□□ 1.8
SCARB1-208ENST00000544327 FHOD3Q2V2M9 1422 aa26.25■■□□□ 1.79
SCARB1-208ENST00000544327 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
SCARB1-208ENST00000544327 SAMD9Q5K651 1589 aa26.23■■□□□ 1.79
SCARB1-208ENST00000544327 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.78
SCARB1-208ENST00000544327 FMN1Q68DA7 1419 aa26.2■■□□□ 1.78
SCARB1-208ENST00000544327 DNAJC5BQ9UF47 199 aa26.19■■□□□ 1.78
SCARB1-208ENST00000544327 PHLDB1Q86UU1 1377 aa26.18■■□□□ 1.78
SCARB1-208ENST00000544327 SNAPC4Q5SXM2 1469 aa26.15■■□□□ 1.78
SCARB1-208ENST00000544327 P3H3Q8IVL6 736 aa26.13■■□□□ 1.77
SCARB1-208ENST00000544327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.12■■□□□ 1.772e-20■■■■□ 24.5
SCARB1-208ENST00000544327 THOC2Q8NI27 1593 aaKnown RBP26.1■■□□□ 1.77
SCARB1-208ENST00000544327 PBRM1Q86U86 1689 aa26.1■■□□□ 1.77
SCARB1-208ENST00000544327 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
SCARB1-208ENST00000544327 RAB3GAP2Q9H2M9 1393 aa26.07■■□□□ 1.76
SCARB1-208ENST00000544327 SETD5Q9C0A6 1442 aa26.06■■□□□ 1.76
SCARB1-208ENST00000544327 SCAF1Q9H7N4 1312 aaKnown RBP26.03■■□□□ 1.76
SCARB1-208ENST00000544327 GRIN2BQ13224 1484 aa26.03■■□□□ 1.76
SCARB1-208ENST00000544327 ACIN1Q9UKV3 1341 aaKnown RBP26.02■■□□□ 1.76
SCARB1-208ENST00000544327 ADAMTS12P58397 1594 aa26.01■■□□□ 1.75
SCARB1-208ENST00000544327 LRRIQ1Q96JM4 1722 aa26■■□□□ 1.75
SCARB1-208ENST00000544327 MAPKBP1O60336 1514 aa26■■□□□ 1.75
SCARB1-208ENST00000544327 ITGAEP38570 1179 aa25.98■■□□□ 1.75
SCARB1-208ENST00000544327 CENPBP07199 599 aaPredicted RBP25.96■■□□□ 1.75
SCARB1-208ENST00000544327 ATP1B4Q9UN42 357 aaPredicted RBP25.95■■□□□ 1.75
SCARB1-208ENST00000544327 FGD6Q6ZV73 1430 aa25.94■■□□□ 1.74
SCARB1-208ENST00000544327 WDR62O43379 1518 aa25.93■■□□□ 1.74
SCARB1-208ENST00000544327 FAM50AQ14320 339 aaKnown RBP25.92■■□□□ 1.74
SCARB1-208ENST00000544327 IQGAP2Q13576 1575 aa25.91■■□□□ 1.74
SCARB1-208ENST00000544327 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
SCARB1-208ENST00000544327 EHBP1L1Q8N3D4 1523 aa25.91■■□□□ 1.74
SCARB1-208ENST00000544327 NEUROD1Q13562 356 aa25.91■■□□□ 1.74
SCARB1-208ENST00000544327 MTUS2Q5JR59 1369 aa25.89■■□□□ 1.73
SCARB1-208ENST00000544327 SUPT6HQ7KZ85 1726 aaKnown RBP25.88■■□□□ 1.73
SCARB1-208ENST00000544327 CCDC18Q5T9S5 1454 aa25.88■■□□□ 1.73
SCARB1-208ENST00000544327 ARHGEF11O15085 1522 aa25.85■■□□□ 1.73
SCARB1-208ENST00000544327 MIER1Q8N108 512 aa25.84■■□□□ 1.73
SCARB1-208ENST00000544327 NCOA2Q15596 1464 aa25.84■■□□□ 1.73
SCARB1-208ENST00000544327 HECW1Q76N89 1606 aa25.84■■□□□ 1.73
SCARB1-208ENST00000544327 UGGT2Q9NYU1 1516 aa25.82■■□□□ 1.72
SCARB1-208ENST00000544327 MYOM3Q5VTT5 1437 aa25.82■■□□□ 1.72
SCARB1-208ENST00000544327 MAGI3Q5TCQ9 1506 aa25.76■■□□□ 1.71
SCARB1-208ENST00000544327 ZNF608Q9ULD9 1512 aaPredicted RBP25.75■■□□□ 1.71
SCARB1-208ENST00000544327 HFM1A2PYH4 1435 aa25.75■■□□□ 1.71
SCARB1-208ENST00000544327 TIMELESSQ9UNS1 1208 aa25.74■■□□□ 1.71
SCARB1-208ENST00000544327 PTPN23Q9H3S7 1636 aa25.73■■□□□ 1.71
SCARB1-208ENST00000544327 TCOF1Q13428 1488 aaKnown RBP25.71■■□□□ 1.71
SCARB1-208ENST00000544327 EPRSP07814 1512 aaKnown RBP25.71■■□□□ 1.71
SCARB1-208ENST00000544327 KIAA0586Q9BVV6 1533 aa25.71■■□□□ 1.71
SCARB1-208ENST00000544327 PTPRKQ15262 1439 aa25.7■■□□□ 1.71
SCARB1-208ENST00000544327 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
SCARB1-208ENST00000544327 KIAA0556O60303 1618 aa25.66■■□□□ 1.7
SCARB1-208ENST00000544327 UACAQ9BZF9 1416 aa25.64■■□□□ 1.7
SCARB1-208ENST00000544327 GRIN2AQ12879 1464 aa25.64■■□□□ 1.69
SCARB1-208ENST00000544327 NAIPQ13075 1403 aa25.63■■□□□ 1.69
SCARB1-208ENST00000544327 DISP1Q96F81 1524 aa25.62■■□□□ 1.69
SCARB1-208ENST00000544327 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
SCARB1-208ENST00000544327 MIA2Q96PC5 1412 aa25.6■■□□□ 1.69
SCARB1-208ENST00000544327 AKNAQ7Z591 1439 aa25.6■■□□□ 1.69
SCARB1-208ENST00000544327 CDK13Q14004 1512 aaKnown RBP25.58■■□□□ 1.69
SCARB1-208ENST00000544327 GCC2Q8IWJ2 1684 aa25.58■■□□□ 1.69
SCARB1-208ENST00000544327 SIN3AQ96ST3 1273 aa25.58■■□□□ 1.68
SCARB1-208ENST00000544327 GTF3C3Q9Y5Q9 886 aa25.58■■□□□ 1.68
SCARB1-208ENST00000544327 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
SCARB1-208ENST00000544327 RAPGEF6Q8TEU7 1601 aa25.52■■□□□ 1.68
SCARB1-208ENST00000544327 YTHDC1Q96MU7 727 aaKnown RBP25.52■■□□□ 1.68
SCARB1-208ENST00000544327 SYNJ2O15056 1496 aa25.5■■□□□ 1.67
SCARB1-208ENST00000544327 NUP153P49790 1475 aaKnown RBP25.48■■□□□ 1.67
SCARB1-208ENST00000544327 PPP1R15AO75807 674 aaPredicted RBP25.48■■□□□ 1.67
SCARB1-208ENST00000544327 CEP170Q5SW79 1584 aa25.47■■□□□ 1.67
SCARB1-208ENST00000544327 NUP160Q12769 1436 aa25.42■■□□□ 1.66
SCARB1-208ENST00000544327 TONSLQ96HA7 1378 aa25.39■■□□□ 1.66
SCARB1-208ENST00000544327 DNMT1P26358 1616 aaKnown RBP25.37■■□□□ 1.65
SCARB1-208ENST00000544327 ROCK1Q13464 1354 aa25.37■■□□□ 1.65
SCARB1-208ENST00000544327 KDM5BQ9UGL1 1544 aa25.34■■□□□ 1.65
SCARB1-208ENST00000544327 ADCY10Q96PN6 1610 aa25.34■■□□□ 1.65
SCARB1-208ENST00000544327 PELP1Q8IZL8 1130 aaKnown RBP25.34■■□□□ 1.65
SCARB1-208ENST00000544327 CHMP7Q8WUX9 453 aaPredicted RBP25.34■■□□□ 1.65
SCARB1-208ENST00000544327 CDK11AQ9UQ88 783 aaPredicted RBP25.34■■□□□ 1.65
SCARB1-208ENST00000544327 KDM6BO15054 1643 aa25.34■■□□□ 1.65
SCARB1-208ENST00000544327 DAPK1P53355 1430 aa25.33■■□□□ 1.65
SCARB1-208ENST00000544327 DENND4BO75064 1496 aaPredicted RBP25.33■■□□□ 1.65
SCARB1-208ENST00000544327 TROQ12816 1431 aaPredicted RBP25.33■■□□□ 1.65
SCARB1-208ENST00000544327 RRP7BPQ9NSQ0 103 aa25.31■■□□□ 1.64
SCARB1-208ENST00000544327 CARMIL2Q6F5E8 1435 aa25.31■■□□□ 1.64
SCARB1-208ENST00000544327 ITSN2Q9NZM3 1697 aa25.3■■□□□ 1.64
SCARB1-208ENST00000544327 ABCC5O15440 1437 aa25.28■■□□□ 1.64
SCARB1-208ENST00000544327 CHIC2Q9UKJ5 165 aa25.27■■□□□ 1.64
SCARB1-208ENST00000544327 ARID3CA6NKF2 412 aa25.26■■□□□ 1.63
SCARB1-208ENST00000544327 PLB1Q6P1J6 1458 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms