RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 SYNJ2O15056 1496 aa28.61■■■□□ 2.17
CHERP-202ENST00000544299 GRIN2AQ12879 1464 aa28.61■■■□□ 2.17
CHERP-202ENST00000544299 VPS8Q8N3P4 1428 aa28.59■■■□□ 2.17
CHERP-202ENST00000544299 EFCAB5A4FU69 1503 aa28.51■■■□□ 2.16
CHERP-202ENST00000544299 IQGAP2Q13576 1575 aa28.49■■■□□ 2.15
CHERP-202ENST00000544299 SAMD9Q5K651 1589 aa28.47■■■□□ 2.15
CHERP-202ENST00000544299 CEP170Q5SW79 1584 aa28.46■■■□□ 2.15
CHERP-202ENST00000544299 CHMP7Q8WUX9 453 aaPredicted RBP28.46■■■□□ 2.15
CHERP-202ENST00000544299 KIAA0586Q9BVV6 1533 aa28.44■■■□□ 2.14
CHERP-202ENST00000544299 NUP160Q12769 1436 aa28.43■■■□□ 2.14
CHERP-202ENST00000544299 FHOD3Q2V2M9 1422 aa28.39■■■□□ 2.13
CHERP-202ENST00000544299 CHD1O14646 1710 aa28.38■■■□□ 2.13
CHERP-202ENST00000544299 UGGT2Q9NYU1 1516 aa28.38■■■□□ 2.13
CHERP-202ENST00000544299 FBLN2P98095 1184 aa28.37■■■□□ 2.13
CHERP-202ENST00000544299 P3H3Q8IVL6 736 aa28.34■■■□□ 2.13
CHERP-202ENST00000544299 PPARGC1BQ86YN6 1023 aaKnown RBP28.33■■■□□ 2.13
CHERP-202ENST00000544299 PCF11O94913 1555 aaKnown RBP28.27■■■□□ 2.12
CHERP-202ENST00000544299 DISP1Q96F81 1524 aa28.24■■■□□ 2.11
CHERP-202ENST00000544299 KIAA0556O60303 1618 aa28.23■■■□□ 2.11
CHERP-202ENST00000544299 TRIM26Q12899 539 aaPredicted RBP28.21■■■□□ 2.11
CHERP-202ENST00000544299 FMN1Q68DA7 1419 aa28.2■■■□□ 2.11
CHERP-202ENST00000544299 CASKIN1Q8WXD9 1431 aa28.18■■■□□ 2.1
CHERP-202ENST00000544299 FYCO1Q9BQS8 1478 aa28.18■■■□□ 2.1
CHERP-202ENST00000544299 PCGF6Q9BYE7 350 aa28.16■■■□□ 2.1
CHERP-202ENST00000544299 APLP2Q06481 763 aa28.15■■■□□ 2.1
CHERP-202ENST00000544299 MAP3K1Q13233 1512 aa28.14■■■□□ 2.09
CHERP-202ENST00000544299 TIAM1Q13009 1591 aa28.12■■■□□ 2.09
CHERP-202ENST00000544299 JPH4Q96JJ6 628 aa28.11■■■□□ 2.09
CHERP-202ENST00000544299 TTBK1Q5TCY1 1321 aaPredicted RBP28.11■■■□□ 2.09
CHERP-202ENST00000544299 CFAP43Q8NDM7 1665 aa28.1■■■□□ 2.09
CHERP-202ENST00000544299 SHROOM2Q13796 1616 aa28.08■■■□□ 2.09
CHERP-202ENST00000544299 CLASP1Q7Z460 1538 aa28.08■■■□□ 2.09
CHERP-202ENST00000544299 KANK4Q5T7N3 995 aaPredicted RBP28.06■■■□□ 2.08
CHERP-202ENST00000544299 LRRIQ1Q96JM4 1722 aa28.05■■■□□ 2.08
CHERP-202ENST00000544299 CARMIL2Q6F5E8 1435 aa28.03■■■□□ 2.08
CHERP-202ENST00000544299 PRG4Q92954 1404 aaPredicted RBP27.99■■■□□ 2.07
CHERP-202ENST00000544299 HECW1Q76N89 1606 aa27.98■■■□□ 2.07
CHERP-202ENST00000544299 LRRC9Q6ZRR7 1453 aa27.97■■■□□ 2.07
CHERP-202ENST00000544299 ATP1B4Q9UN42 357 aaPredicted RBP27.96■■■□□ 2.07
CHERP-202ENST00000544299 RAPGEF6Q8TEU7 1601 aa27.92■■■□□ 2.06
CHERP-202ENST00000544299 ERCC6L2Q5T890 1561 aa27.89■■■□□ 2.06
CHERP-202ENST00000544299 CCDC18Q5T9S5 1454 aa27.88■■■□□ 2.05
CHERP-202ENST00000544299 EPRSP07814 1512 aaKnown RBP27.88■■■□□ 2.05
CHERP-202ENST00000544299 NUP153P49790 1475 aaKnown RBP27.86■■■□□ 2.05
CHERP-202ENST00000544299 PLB1Q6P1J6 1458 aa27.85■■■□□ 2.05
CHERP-202ENST00000544299 ABCA8O94911 1581 aa27.84■■■□□ 2.05
CHERP-202ENST00000544299 CDK13Q14004 1512 aaKnown RBP27.83■■■□□ 2.05
CHERP-202ENST00000544299 MAGI3Q5TCQ9 1506 aa27.8■■■□□ 2.04
CHERP-202ENST00000544299 PTPRGP23470 1445 aa27.78■■■□□ 2.04
CHERP-202ENST00000544299 EHBP1L1Q8N3D4 1523 aa27.76■■■□□ 2.04
CHERP-202ENST00000544299 MTUS2Q5JR59 1369 aa27.74■■■□□ 2.03
CHERP-202ENST00000544299 RRBP1Q9P2E9 1410 aaKnown RBP27.73■■■□□ 2.03
CHERP-202ENST00000544299 PHLDB1Q86UU1 1377 aa27.72■■■□□ 2.03
CHERP-202ENST00000544299 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
CHERP-202ENST00000544299 HRCP23327 699 aa27.71■■■□□ 2.03
CHERP-202ENST00000544299 ARID3CA6NKF2 412 aa27.7■■■□□ 2.02
CHERP-202ENST00000544299 SUPT6HQ7KZ85 1726 aaKnown RBP27.67■■■□□ 2.02
CHERP-202ENST00000544299 ARHGEF11O15085 1522 aa27.66■■■□□ 2.02
CHERP-202ENST00000544299 NCOA2Q15596 1464 aa27.64■■■□□ 2.02
CHERP-202ENST00000544299 UACAQ9BZF9 1416 aa27.64■■■□□ 2.02
CHERP-202ENST00000544299 ATP10BO94823 1461 aa27.62■■■□□ 2.01
CHERP-202ENST00000544299 CCNB3Q8WWL7 1395 aa27.61■■■□□ 2.01
CHERP-202ENST00000544299 ABCC2Q92887 1545 aa27.6■■■□□ 2.01
CHERP-202ENST00000544299 TROQ12816 1431 aaPredicted RBP27.55■■■□□ 2
CHERP-202ENST00000544299 UHRF1BP1LA0JNW5 1464 aa27.54■■■□□ 2
CHERP-202ENST00000544299 MYOM3Q5VTT5 1437 aa27.52■■■□□ 2
CHERP-202ENST00000544299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.52■■■□□ 2
CHERP-202ENST00000544299 HNRNPUL2Q1KMD3 747 aaKnown RBP27.52■■■□□ 2
CHERP-202ENST00000544299 ADCY10Q96PN6 1610 aa27.51■■■□□ 2
CHERP-202ENST00000544299 FGD6Q6ZV73 1430 aa27.51■■■□□ 2
CHERP-202ENST00000544299 CDK11AQ9UQ88 783 aaPredicted RBP27.51■■□□□ 1.99
CHERP-202ENST00000544299 KIF14Q15058 1648 aa27.47■■□□□ 1.99
CHERP-202ENST00000544299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.44■■□□□ 1.98
CHERP-202ENST00000544299 KDM5BQ9UGL1 1544 aa27.43■■□□□ 1.98
CHERP-202ENST00000544299 ZCCHC11Q5TAX3 1644 aaKnown RBP27.42■■□□□ 1.98
CHERP-202ENST00000544299 PTPN23Q9H3S7 1636 aa27.4■■□□□ 1.98
CHERP-202ENST00000544299 PLEKHD1A6NEE1 506 aa27.4■■□□□ 1.98
CHERP-202ENST00000544299 TCOF1Q13428 1488 aaKnown RBP27.38■■□□□ 1.97
CHERP-202ENST00000544299 FAM50AQ14320 339 aaKnown RBP27.37■■□□□ 1.97
CHERP-202ENST00000544299 ABCC10Q5T3U5 1492 aa27.36■■□□□ 1.97
CHERP-202ENST00000544299 MIA2Q96PC5 1412 aa27.36■■□□□ 1.97
CHERP-202ENST00000544299 GPATCH8Q9UKJ3 1502 aaKnown RBP27.31■■□□□ 1.96
CHERP-202ENST00000544299 ITSN2Q9NZM3 1697 aa27.31■■□□□ 1.96
CHERP-202ENST00000544299 ITGAEP38570 1179 aa27.28■■□□□ 1.96
CHERP-202ENST00000544299 CDC42BPAQ5VT25 1732 aa27.28■■□□□ 1.96
CHERP-202ENST00000544299 ZEB1P37275 1124 aaPredicted RBP27.26■■□□□ 1.95
CHERP-202ENST00000544299 RIMBP3CA6NJZ7 1639 aa27.24■■□□□ 1.95
CHERP-202ENST00000544299 RIMBP3BA6NNM3 1639 aa27.24■■□□□ 1.95
CHERP-202ENST00000544299 RIMBP3Q9UFD9 1639 aa27.24■■□□□ 1.95
CHERP-202ENST00000544299 PTPRKQ15262 1439 aa27.23■■□□□ 1.95
CHERP-202ENST00000544299 TTC37Q6PGP7 1564 aa27.21■■□□□ 1.95
CHERP-202ENST00000544299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.21■■□□□ 1.953e-6■■■□□ 18.9
CHERP-202ENST00000544299 PREX2Q70Z35 1606 aa27.18■■□□□ 1.94
CHERP-202ENST00000544299 CAMSAP2Q08AD1 1489 aa27.17■■□□□ 1.94
CHERP-202ENST00000544299 ZNF644Q9H582 1327 aaPredicted RBP27.16■■□□□ 1.94
CHERP-202ENST00000544299 WDR7Q9Y4E6 1490 aa27.15■■□□□ 1.94
CHERP-202ENST00000544299 CFDP1Q9UEE9 299 aaPredicted RBP27.15■■□□□ 1.94
CHERP-202ENST00000544299 CDC42BPBQ9Y5S2 1711 aa27.15■■□□□ 1.94
CHERP-202ENST00000544299 DNMT1P26358 1616 aaKnown RBP27.14■■□□□ 1.93
CHERP-202ENST00000544299 MYO5CQ9NQX4 1742 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms