RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 RAPGEF2Q9Y4G8 1499 aa16.77■□□□□ 0.28
VEGFB-204ENST00000543462 CTTNBP2Q8WZ74 1663 aa16.77■□□□□ 0.28
VEGFB-204ENST00000543462 KIF21BO75037 1637 aa16.75■□□□□ 0.27
VEGFB-204ENST00000543462 KIAA0586Q9BVV6 1533 aa16.72■□□□□ 0.27
VEGFB-204ENST00000543462 ERCC6L2Q5T890 1561 aa16.7■□□□□ 0.26
VEGFB-204ENST00000543462 IQGAP2Q13576 1575 aa16.69■□□□□ 0.26
VEGFB-204ENST00000543462 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
VEGFB-204ENST00000543462 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
VEGFB-204ENST00000543462 UGGT2Q9NYU1 1516 aa16.63■□□□□ 0.25
VEGFB-204ENST00000543462 DISP1Q96F81 1524 aa16.57■□□□□ 0.24
VEGFB-204ENST00000543462 PRG4Q92954 1404 aaPredicted RBP16.57■□□□□ 0.24
VEGFB-204ENST00000543462 KIAA0556O60303 1618 aa16.56■□□□□ 0.24
VEGFB-204ENST00000543462 SAMD9Q5K651 1589 aa16.55■□□□□ 0.24
VEGFB-204ENST00000543462 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
VEGFB-204ENST00000543462 JPH4Q96JJ6 628 aa16.54■□□□□ 0.24
VEGFB-204ENST00000543462 FAM9AQ8IZU1 332 aaPredicted RBP16.52■□□□□ 0.24
VEGFB-204ENST00000543462 ADCY10Q96PN6 1610 aa16.45■□□□□ 0.22
VEGFB-204ENST00000543462 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
VEGFB-204ENST00000543462 EFCAB5A4FU69 1503 aa16.44■□□□□ 0.22
VEGFB-204ENST00000543462 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
VEGFB-204ENST00000543462 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
VEGFB-204ENST00000543462 ABCA8O94911 1581 aa16.38■□□□□ 0.21
VEGFB-204ENST00000543462 UHRF1BP1LA0JNW5 1464 aa16.37■□□□□ 0.21
VEGFB-204ENST00000543462 PTPRGP23470 1445 aa16.36■□□□□ 0.21
VEGFB-204ENST00000543462 ABCC2Q92887 1545 aa16.35■□□□□ 0.21
VEGFB-204ENST00000543462 ARHGAP35Q9NRY4 1499 aa16.35■□□□□ 0.21
VEGFB-204ENST00000543462 MAPKBP1O60336 1514 aa16.3■□□□□ 0.2
VEGFB-204ENST00000543462 PLB1Q6P1J6 1458 aa16.3■□□□□ 0.2
VEGFB-204ENST00000543462 UACAQ9BZF9 1416 aa16.3■□□□□ 0.2
VEGFB-204ENST00000543462 RAPGEF6Q8TEU7 1601 aa16.3■□□□□ 0.2
VEGFB-204ENST00000543462 FHOD3Q2V2M9 1422 aa16.29■□□□□ 0.2
VEGFB-204ENST00000543462 ZCCHC11Q5TAX3 1644 aaKnown RBP16.29■□□□□ 0.2
VEGFB-204ENST00000543462 KDM5BQ9UGL1 1544 aa16.29■□□□□ 0.2
VEGFB-204ENST00000543462 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
VEGFB-204ENST00000543462 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
VEGFB-204ENST00000543462 LRRIQ1Q96JM4 1722 aa16.24■□□□□ 0.19
VEGFB-204ENST00000543462 EHMT2Q96KQ7 1210 aa16.23■□□□□ 0.19
VEGFB-204ENST00000543462 NUP153P49790 1475 aaKnown RBP16.22■□□□□ 0.19
VEGFB-204ENST00000543462 DIP2BQ9P265 1576 aa16.21■□□□□ 0.18
VEGFB-204ENST00000543462 CLIP1P30622 1438 aa16.2■□□□□ 0.18
VEGFB-204ENST00000543462 PCF11O94913 1555 aaKnown RBP16.2■□□□□ 0.18
VEGFB-204ENST00000543462 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
VEGFB-204ENST00000543462 P3H3Q8IVL6 736 aa16.18■□□□□ 0.18
VEGFB-204ENST00000543462 HECW1Q76N89 1606 aa16.18■□□□□ 0.18
VEGFB-204ENST00000543462 FMN1Q68DA7 1419 aa16.18■□□□□ 0.18
VEGFB-204ENST00000543462 ATP10BO94823 1461 aa16.16■□□□□ 0.18
VEGFB-204ENST00000543462 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
VEGFB-204ENST00000543462 LOC105371045A0A1W2PR82 267 aa16.14■□□□□ 0.17
VEGFB-204ENST00000543462 TTBK1Q5TCY1 1321 aaPredicted RBP16.14■□□□□ 0.17
VEGFB-204ENST00000543462 GLI2P10070 1586 aa16.13■□□□□ 0.17
VEGFB-204ENST00000543462 ASXL2Q76L83 1435 aa16.13■□□□□ 0.17
VEGFB-204ENST00000543462 RANGAP1P46060 587 aaPredicted RBP16.13■□□□□ 0.17
VEGFB-204ENST00000543462 FYCO1Q9BQS8 1478 aa16.12■□□□□ 0.17
VEGFB-204ENST00000543462 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
VEGFB-204ENST00000543462 WDR7Q9Y4E6 1490 aa16.11■□□□□ 0.17
VEGFB-204ENST00000543462 MAP3K4Q9Y6R4 1608 aa16.1■□□□□ 0.17
VEGFB-204ENST00000543462 PPRC1Q5VV67 1664 aaKnown RBP16.1■□□□□ 0.17
VEGFB-204ENST00000543462 EPRSP07814 1512 aaKnown RBP16.09■□□□□ 0.17
VEGFB-204ENST00000543462 CDK13Q14004 1512 aaKnown RBP16.09■□□□□ 0.17
VEGFB-204ENST00000543462 CFAP43Q8NDM7 1665 aa16.05■□□□□ 0.16
VEGFB-204ENST00000543462 ABCA9Q8IUA7 1624 aa16.05■□□□□ 0.16
VEGFB-204ENST00000543462 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
VEGFB-204ENST00000543462 CCDC18Q5T9S5 1454 aa16.03■□□□□ 0.16
VEGFB-204ENST00000543462 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.15
VEGFB-204ENST00000543462 VPS8Q8N3P4 1428 aa16.01■□□□□ 0.15
VEGFB-204ENST00000543462 TSPOAP1O95153 1857 aa16■□□□□ 0.15
VEGFB-204ENST00000543462 KIF14Q15058 1648 aa15.98■□□□□ 0.15
VEGFB-204ENST00000543462 TTC37Q6PGP7 1564 aa15.98■□□□□ 0.15
VEGFB-204ENST00000543462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.96■□□□□ 0.15
VEGFB-204ENST00000543462 ARID3CA6NKF2 412 aa15.95■□□□□ 0.14
VEGFB-204ENST00000543462 TIAM1Q13009 1591 aa15.95■□□□□ 0.14
VEGFB-204ENST00000543462 TROQ12816 1431 aaPredicted RBP15.94■□□□□ 0.14
VEGFB-204ENST00000543462 MAP3K1Q13233 1512 aa15.94■□□□□ 0.14
VEGFB-204ENST00000543462 MYO5CQ9NQX4 1742 aa15.92■□□□□ 0.14
VEGFB-204ENST00000543462 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
VEGFB-204ENST00000543462 FAM69CQ0P6D2 419 aa15.92■□□□□ 0.14
VEGFB-204ENST00000543462 EHBP1L1Q8N3D4 1523 aa15.9■□□□□ 0.14
VEGFB-204ENST00000543462 CDC42BPAQ5VT25 1732 aa15.9■□□□□ 0.14
VEGFB-204ENST00000543462 ARAP3Q8WWN8 1544 aa15.89■□□□□ 0.13
VEGFB-204ENST00000543462 PREX2Q70Z35 1606 aa15.89■□□□□ 0.13
VEGFB-204ENST00000543462 CDC42BPBQ9Y5S2 1711 aa15.88■□□□□ 0.13
VEGFB-204ENST00000543462 CD109Q6YHK3 1445 aa15.86■□□□□ 0.13
VEGFB-204ENST00000543462 TEX14Q8IWB6 1497 aa15.86■□□□□ 0.13
VEGFB-204ENST00000543462 CFAP74Q9C0B2 1584 aa15.86■□□□□ 0.13
VEGFB-204ENST00000543462 PLEKHD1A6NEE1 506 aa15.85■□□□□ 0.13
VEGFB-204ENST00000543462 KDM6BO15054 1643 aa15.84■□□□□ 0.13
VEGFB-204ENST00000543462 SUPT6HQ7KZ85 1726 aaKnown RBP15.82■□□□□ 0.12
VEGFB-204ENST00000543462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
VEGFB-204ENST00000543462 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
VEGFB-204ENST00000543462 KCNH8Q96L42 1107 aa15.82■□□□□ 0.12
VEGFB-204ENST00000543462 LRRC9Q6ZRR7 1453 aa15.82■□□□□ 0.12
VEGFB-204ENST00000543462 NEO1Q92859 1461 aa15.82■□□□□ 0.12
VEGFB-204ENST00000543462 FRMPD1Q5SYB0 1578 aa15.81■□□□□ 0.12
VEGFB-204ENST00000543462 COL17A1Q9UMD9 1497 aaPredicted RBP15.81■□□□□ 0.12
VEGFB-204ENST00000543462 ATP1B4Q9UN42 357 aaPredicted RBP15.81■□□□□ 0.12
VEGFB-204ENST00000543462 CDK11AQ9UQ88 783 aaPredicted RBP15.81■□□□□ 0.12
VEGFB-204ENST00000543462 ITSN2Q9NZM3 1697 aa15.8■□□□□ 0.12
VEGFB-204ENST00000543462 PLCH2O75038 1416 aa15.8■□□□□ 0.12
VEGFB-204ENST00000543462 RICTORQ6R327 1708 aa15.8■□□□□ 0.12
VEGFB-204ENST00000543462 FANCAO15360 1455 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms