RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	CSRNP3	Q8WYN3	585 aa		12.11	□□□□□ -0.47
GTF2H3-212	ENST00000543341	KIAA0586	Q9BVV6	1533 aa		12.11	□□□□□ -0.47
GTF2H3-212	ENST00000543341	TNIK	Q9UKE5	1360 aa		12.1	□□□□□ -0.47
GTF2H3-212	ENST00000543341	KIAA0556	O60303	1618 aa		12.08	□□□□□ -0.48
GTF2H3-212	ENST00000543341	DISP1	Q96F81	1524 aa		12.06	□□□□□ -0.48
GTF2H3-212	ENST00000543341	LRRIQ1	Q96JM4	1722 aa		12.05	□□□□□ -0.48
GTF2H3-212	ENST00000543341	ARAP1	Q96P48	1450 aa		12	□□□□□ -0.49
GTF2H3-212	ENST00000543341	ARHGAP35	Q9NRY4	1499 aa		12	□□□□□ -0.49
GTF2H3-212	ENST00000543341	CFAP43	Q8NDM7	1665 aa		11.98	□□□□□ -0.49
GTF2H3-212	ENST00000543341	ABCA8	O94911	1581 aa		11.96	□□□□□ -0.49
GTF2H3-212	ENST00000543341	ERCC6L2	Q5T890	1561 aa		11.95	□□□□□ -0.5
GTF2H3-212	ENST00000543341	MAP3K1	Q13233	1512 aa		11.94	□□□□□ -0.5
GTF2H3-212	ENST00000543341	CEP162	Q5TB80	1403 aa		11.94	□□□□□ -0.5
GTF2H3-212	ENST00000543341	UHRF1BP1L	A0JNW5	1464 aa		11.91	□□□□□ -0.5
GTF2H3-212	ENST00000543341	RIMBP3C	A6NJZ7	1639 aa		11.9	□□□□□ -0.5
GTF2H3-212	ENST00000543341	RIMBP3B	A6NNM3	1639 aa		11.9	□□□□□ -0.5
GTF2H3-212	ENST00000543341	RIMBP3	Q9UFD9	1639 aa		11.9	□□□□□ -0.5
GTF2H3-212	ENST00000543341	PCF11	O94913	1555 aa	Known RBP	11.9	□□□□□ -0.5
GTF2H3-212	ENST00000543341	RAPGEF6	Q8TEU7	1601 aa		11.9	□□□□□ -0.51
GTF2H3-212	ENST00000543341	ADCY10	Q96PN6	1610 aa		11.88	□□□□□ -0.51
GTF2H3-212	ENST00000543341	FYCO1	Q9BQS8	1478 aa		11.88	□□□□□ -0.51
GTF2H3-212	ENST00000543341	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.88	□□□□□ -0.51
GTF2H3-212	ENST00000543341	HECW1	Q76N89	1606 aa		11.86	□□□□□ -0.51
GTF2H3-212	ENST00000543341	CLIP1	P30622	1438 aa		11.85	□□□□□ -0.51
GTF2H3-212	ENST00000543341	ARHGEF11	O15085	1522 aa		11.85	□□□□□ -0.51
GTF2H3-212	ENST00000543341	CASKIN1	Q8WXD9	1431 aa		11.84	□□□□□ -0.51
GTF2H3-212	ENST00000543341	KDM5B	Q9UGL1	1544 aa		11.84	□□□□□ -0.51
GTF2H3-212	ENST00000543341	VPS8	Q8N3P4	1428 aa		11.83	□□□□□ -0.52
GTF2H3-212	ENST00000543341	ABCC2	Q92887	1545 aa		11.83	□□□□□ -0.52
GTF2H3-212	ENST00000543341	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.82	□□□□□ -0.52
GTF2H3-212	ENST00000543341	PRG4	Q92954	1404 aa	Predicted RBP	11.81	□□□□□ -0.52
GTF2H3-212	ENST00000543341	TIAM1	Q13009	1591 aa		11.81	□□□□□ -0.52
GTF2H3-212	ENST00000543341	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.8	□□□□□ -0.52
GTF2H3-212	ENST00000543341	NUP153	P49790	1475 aa	Known RBP	11.8	□□□□□ -0.52
GTF2H3-212	ENST00000543341	FMN1	Q68DA7	1419 aa		11.8	□□□□□ -0.52
GTF2H3-212	ENST00000543341	LOC105371045	A0A1W2PR82	267 aa		11.79	□□□□□ -0.52
GTF2H3-212	ENST00000543341	CARMIL2	Q6F5E8	1435 aa		11.78	□□□□□ -0.52
GTF2H3-212	ENST00000543341	CCDC18	Q5T9S5	1454 aa		11.77	□□□□□ -0.53
GTF2H3-212	ENST00000543341	FHOD3	Q2V2M9	1422 aa		11.76	□□□□□ -0.53
GTF2H3-212	ENST00000543341	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.76	□□□□□ -0.53
GTF2H3-212	ENST00000543341	MAGI3	Q5TCQ9	1506 aa		11.76	□□□□□ -0.53
GTF2H3-212	ENST00000543341	MAPKBP1	O60336	1514 aa		11.75	□□□□□ -0.53
GTF2H3-212	ENST00000543341	JPH4	Q96JJ6	628 aa		11.75	□□□□□ -0.53
GTF2H3-212	ENST00000543341	OSCAR	Q8IYS5	282 aa		11.75	□□□□□ -0.53
GTF2H3-212	ENST00000543341	EPRS	P07814	1512 aa	Known RBP	11.73	□□□□□ -0.53
GTF2H3-212	ENST00000543341	HRC	P23327	699 aa		11.71	□□□□□ -0.53
GTF2H3-212	ENST00000543341	PCGF6	Q9BYE7	350 aa		11.71	□□□□□ -0.53
GTF2H3-212	ENST00000543341	PLB1	Q6P1J6	1458 aa		11.71	□□□□□ -0.53
GTF2H3-212	ENST00000543341	UACA	Q9BZF9	1416 aa		11.71	□□□□□ -0.54
GTF2H3-212	ENST00000543341	EHBP1L1	Q8N3D4	1523 aa		11.7	□□□□□ -0.54
GTF2H3-212	ENST00000543341	GLI2	P10070	1586 aa		11.7	□□□□□ -0.54
GTF2H3-212	ENST00000543341	ABCA9	Q8IUA7	1624 aa		11.69	□□□□□ -0.54
GTF2H3-212	ENST00000543341	ATP10B	O94823	1461 aa		11.68	□□□□□ -0.54
GTF2H3-212	ENST00000543341	MAP3K4	Q9Y6R4	1608 aa		11.68	□□□□□ -0.54
GTF2H3-212	ENST00000543341	ARAP3	Q8WWN8	1544 aa		11.67	□□□□□ -0.54
GTF2H3-212	ENST00000543341	CDC42BPA	Q5VT25	1732 aa		11.67	□□□□□ -0.54
GTF2H3-212	ENST00000543341	KIF13A	Q9H1H9	1805 aa		11.67	□□□□□ -0.54
GTF2H3-212	ENST00000543341	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.66	□□□□□ -0.54
GTF2H3-212	ENST00000543341	LRRC9	Q6ZRR7	1453 aa		11.66	□□□□□ -0.54
GTF2H3-212	ENST00000543341	PPRC1	Q5VV67	1664 aa	Known RBP	11.66	□□□□□ -0.54
GTF2H3-212	ENST00000543341	PREX2	Q70Z35	1606 aa		11.65	□□□□□ -0.54
GTF2H3-212	ENST00000543341	ABCC10	Q5T3U5	1492 aa		11.65	□□□□□ -0.54
GTF2H3-212	ENST00000543341	PTPRG	P23470	1445 aa		11.65	□□□□□ -0.54
GTF2H3-212	ENST00000543341	UBTF	P17480	764 aa	Known RBP	11.65	□□□□□ -0.55
GTF2H3-212	ENST00000543341	CDK13	Q14004	1512 aa	Known RBP	11.64	□□□□□ -0.55
GTF2H3-212	ENST00000543341	KIF14	Q15058	1648 aa		11.64	□□□□□ -0.55
GTF2H3-212	ENST00000543341	ITSN2	Q9NZM3	1697 aa		11.64	□□□□□ -0.55
GTF2H3-212	ENST00000543341	CDC42BPB	Q9Y5S2	1711 aa		11.64	□□□□□ -0.55
GTF2H3-212	ENST00000543341	DIP2B	Q9P265	1576 aa		11.62	□□□□□ -0.55
GTF2H3-212	ENST00000543341	MYO5C	Q9NQX4	1742 aa		11.61	□□□□□ -0.55
GTF2H3-212	ENST00000543341	CROCC2	H7BZ55	1655 aa		11.61	□□□□□ -0.55
GTF2H3-212	ENST00000543341	TTC37	Q6PGP7	1564 aa		11.61	□□□□□ -0.55
GTF2H3-212	ENST00000543341	FBLN2	P98095	1184 aa		11.6	□□□□□ -0.55
GTF2H3-212	ENST00000543341	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
GTF2H3-212	ENST00000543341	TCOF1	Q13428	1488 aa	Known RBP	11.58	□□□□□ -0.55
GTF2H3-212	ENST00000543341	TRO	Q12816	1431 aa	Predicted RBP	11.57	□□□□□ -0.56
GTF2H3-212	ENST00000543341	WDR7	Q9Y4E6	1490 aa		11.57	□□□□□ -0.56
GTF2H3-212	ENST00000543341	CFAP74	Q9C0B2	1584 aa		11.55	□□□□□ -0.56
GTF2H3-212	ENST00000543341	RRBP1	Q9P2E9	1410 aa	Known RBP	11.54	□□□□□ -0.56
GTF2H3-212	ENST00000543341	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
GTF2H3-212	ENST00000543341	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.53	□□□□□ -0.56
GTF2H3-212	ENST00000543341	DNAJC5	Q9H3Z4	198 aa		11.52	□□□□□ -0.56
GTF2H3-212	ENST00000543341	ARHGEF5	Q12774	1597 aa		11.52	□□□□□ -0.56
GTF2H3-212	ENST00000543341	MAST1	Q9Y2H9	1570 aa		11.52	□□□□□ -0.57
GTF2H3-212	ENST00000543341	NCOA2	Q15596	1464 aa		11.52	□□□□□ -0.57
GTF2H3-212	ENST00000543341	SAMD9L	Q8IVG5	1584 aa		11.51	□□□□□ -0.57
GTF2H3-212	ENST00000543341	ASXL2	Q76L83	1435 aa		11.5	□□□□□ -0.57
GTF2H3-212	ENST00000543341	BCORL1	Q5H9F3	1711 aa		11.5	□□□□□ -0.57
GTF2H3-212	ENST00000543341	DNMT1	P26358	1616 aa	Known RBP	11.5	□□□□□ -0.57
GTF2H3-212	ENST00000543341	PTPN23	Q9H3S7	1636 aa		11.5	□□□□□ -0.57
GTF2H3-212	ENST00000543341	MIA2	Q96PC5	1412 aa		11.49	□□□□□ -0.57
GTF2H3-212	ENST00000543341	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.49	□□□□□ -0.57
GTF2H3-212	ENST00000543341	ADGB	Q8N7X0	1667 aa		11.49	□□□□□ -0.57
GTF2H3-212	ENST00000543341	RICTOR	Q6R327	1708 aa		11.48	□□□□□ -0.57
GTF2H3-212	ENST00000543341	ABCC1	P33527	1531 aa		11.48	□□□□□ -0.57
GTF2H3-212	ENST00000543341	FRMPD1	Q5SYB0	1578 aa		11.47	□□□□□ -0.57
GTF2H3-212	ENST00000543341	KDM5C	P41229	1560 aa		11.46	□□□□□ -0.57
GTF2H3-212	ENST00000543341	EHMT2	Q96KQ7	1210 aa		11.46	□□□□□ -0.57
GTF2H3-212	ENST00000543341	GCC2	Q8IWJ2	1684 aa		11.46	□□□□□ -0.57
GTF2H3-212	ENST00000543341	MYOM3	Q5VTT5	1437 aa		11.46	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms