RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 IGF1RP08069 1367 aa11.37□□□□□ -0.59
LRP6-206ENST00000543091 TSPY4P0CV99 314 aa11.36□□□□□ -0.59
LRP6-206ENST00000543091 TSPY10P0CW01 314 aa11.36□□□□□ -0.59
LRP6-206ENST00000543091 CUX1P39880 1505 aa11.36□□□□□ -0.59
LRP6-206ENST00000543091 TOP2BQ02880 1626 aa11.35□□□□□ -0.59
LRP6-206ENST00000543091 TRHP20396 242 aaPredicted RBP11.35□□□□□ -0.59
LRP6-206ENST00000543091 FMN1Q68DA7 1419 aa11.33□□□□□ -0.6
LRP6-206ENST00000543091 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
LRP6-206ENST00000543091 CFDP1Q9UEE9 299 aaPredicted RBP11.3□□□□□ -0.6
LRP6-206ENST00000543091 URB2Q14146 1524 aaKnown RBP11.3□□□□□ -0.6
LRP6-206ENST00000543091 RUSC2Q8N2Y8 1516 aa11.29□□□□□ -0.6
LRP6-206ENST00000543091 PTPRGP23470 1445 aa11.29□□□□□ -0.6
LRP6-206ENST00000543091 ABCA10Q8WWZ4 1543 aa11.28□□□□□ -0.6
LRP6-206ENST00000543091 CYB5RLQ6IPT4 315 aa11.28□□□□□ -0.6
LRP6-206ENST00000543091 MYT1Q01538 1121 aa11.27□□□□□ -0.6
LRP6-206ENST00000543091 SNAPC4Q5SXM2 1469 aa11.26□□□□□ -0.61
LRP6-206ENST00000543091 CCNB3Q8WWL7 1395 aa11.25□□□□□ -0.61
LRP6-206ENST00000543091 VPS8Q8N3P4 1428 aa11.23□□□□□ -0.61
LRP6-206ENST00000543091 FHOD3Q2V2M9 1422 aa11.23□□□□□ -0.61
LRP6-206ENST00000543091 CHIC2Q9UKJ5 165 aa11.22□□□□□ -0.61
LRP6-206ENST00000543091 MAGI1Q96QZ7 1491 aaPredicted RBP11.22□□□□□ -0.61
LRP6-206ENST00000543091 PELP1Q8IZL8 1130 aaKnown RBP11.21□□□□□ -0.61
LRP6-206ENST00000543091 ACIN1Q9UKV3 1341 aaKnown RBP11.21□□□□□ -0.62
LRP6-206ENST00000543091 HRCP23327 699 aa11.2□□□□□ -0.62
LRP6-206ENST00000543091 SYNJ2O15056 1496 aa11.19□□□□□ -0.62
LRP6-206ENST00000543091 EFCAB2Q5VUJ9 269 aa11.19□□□□□ -0.62
LRP6-206ENST00000543091 ERICH3Q5RHP9 1530 aa11.18□□□□□ -0.62
LRP6-206ENST00000543091 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
LRP6-206ENST00000543091 ARID4BQ4LE39 1312 aaPredicted RBP11.18□□□□□ -0.62
LRP6-206ENST00000543091 PRG4Q92954 1404 aaPredicted RBP11.17□□□□□ -0.62
LRP6-206ENST00000543091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.17□□□□□ -0.621e-6■■■□□ 18.2
LRP6-206ENST00000543091 BCANQ96GW7 911 aa11.16□□□□□ -0.62
LRP6-206ENST00000543091 ZNF608Q9ULD9 1512 aaPredicted RBP11.16□□□□□ -0.62
LRP6-206ENST00000543091 BIVM-ERCC5R4GMW8 1640 aa11.16□□□□□ -0.62
LRP6-206ENST00000543091 NEUROD1Q13562 356 aa11.15□□□□□ -0.62
LRP6-206ENST00000543091 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
LRP6-206ENST00000543091 PLPPR3Q6T4P5 718 aa11.15□□□□□ -0.62
LRP6-206ENST00000543091 PRXQ9BXM0 1461 aa11.14□□□□□ -0.63
LRP6-206ENST00000543091 WDR62O43379 1518 aa11.14□□□□□ -0.63
LRP6-206ENST00000543091 KIAA0586Q9BVV6 1533 aa11.14□□□□□ -0.63
LRP6-206ENST00000543091 CCDC18Q5T9S5 1454 aa11.14□□□□□ -0.63
LRP6-206ENST00000543091 KIF21BO75037 1637 aa11.14□□□□□ -0.63
LRP6-206ENST00000543091 CUL7Q14999 1698 aa11.13□□□□□ -0.63
LRP6-206ENST00000543091 GRIN2AQ12879 1464 aa11.12□□□□□ -0.63
LRP6-206ENST00000543091 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
LRP6-206ENST00000543091 ARHGAP35Q9NRY4 1499 aa11.11□□□□□ -0.63
LRP6-206ENST00000543091 POLR3GLQ9BT43 218 aa11.11□□□□□ -0.63
LRP6-206ENST00000543091 RRP7BPQ9NSQ0 103 aa11.11□□□□□ -0.63
LRP6-206ENST00000543091 ZNF326Q5BKZ1 582 aaKnown RBP11.1□□□□□ -0.63
LRP6-206ENST00000543091 PRDM2Q13029 1718 aa11.08□□□□□ -0.64
LRP6-206ENST00000543091 RSPH4AQ5TD94 716 aa11.08□□□□□ -0.64
LRP6-206ENST00000543091 EFCAB5A4FU69 1503 aa11.07□□□□□ -0.64
LRP6-206ENST00000543091 FAM69CQ0P6D2 419 aa11.06□□□□□ -0.64
LRP6-206ENST00000543091 IQGAP2Q13576 1575 aa11.05□□□□□ -0.64
LRP6-206ENST00000543091 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
LRP6-206ENST00000543091 KANK4Q5T7N3 995 aaPredicted RBP11.04□□□□□ -0.64
LRP6-206ENST00000543091 KANK1Q14678 1352 aa11.03□□□□□ -0.64
LRP6-206ENST00000543091 TONSLQ96HA7 1378 aa11.01□□□□□ -0.65
LRP6-206ENST00000543091 SPAG9O60271 1321 aaKnown RBP11.01□□□□□ -0.65
LRP6-206ENST00000543091 CASKIN1Q8WXD9 1431 aa11.01□□□□□ -0.65
LRP6-206ENST00000543091 UACAQ9BZF9 1416 aa11□□□□□ -0.65
LRP6-206ENST00000543091 EIF4G3O43432 1585 aaKnown RBP10.99□□□□□ -0.65
LRP6-206ENST00000543091 MLECQ14165 292 aa10.99□□□□□ -0.65
LRP6-206ENST00000543091 WDR97A6NE52 1622 aa10.99□□□□□ -0.65
LRP6-206ENST00000543091 ANKRD30AQ9BXX3 1397 aa10.99□□□□□ -0.65
LRP6-206ENST00000543091 PPP1R15AO75807 674 aaPredicted RBP10.98□□□□□ -0.65
LRP6-206ENST00000543091 HNRNPMP52272 730 aaKnown RBP eCLIP10.97□□□□□ -0.651e-6■■■■□ 23.4
LRP6-206ENST00000543091 GGT6Q6P531 493 aa10.97□□□□□ -0.65
LRP6-206ENST00000543091 FYCO1Q9BQS8 1478 aa10.97□□□□□ -0.65
LRP6-206ENST00000543091 ADAMTS12P58397 1594 aa10.95□□□□□ -0.66
LRP6-206ENST00000543091 ARAP1Q96P48 1450 aa10.93□□□□□ -0.66
LRP6-206ENST00000543091 HECW1Q76N89 1606 aa10.93□□□□□ -0.66
LRP6-206ENST00000543091 KIF3BO15066 747 aa10.92□□□□□ -0.66
LRP6-206ENST00000543091 THOC2Q8NI27 1593 aaKnown RBP10.91□□□□□ -0.66
LRP6-206ENST00000543091 HDGFP51858 240 aaKnown RBP10.91□□□□□ -0.66
LRP6-206ENST00000543091 TROQ12816 1431 aaPredicted RBP10.9□□□□□ -0.66
LRP6-206ENST00000543091 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
LRP6-206ENST00000543091 MYOM3Q5VTT5 1437 aa10.89□□□□□ -0.67
LRP6-206ENST00000543091 TARBP1Q13395 1621 aaKnown RBP10.88□□□□□ -0.67
LRP6-206ENST00000543091 ABCA5Q8WWZ7 1642 aa10.88□□□□□ -0.67
LRP6-206ENST00000543091 NUP160Q12769 1436 aa10.88□□□□□ -0.67
LRP6-206ENST00000543091 SETD5Q9C0A6 1442 aa10.87□□□□□ -0.67
LRP6-206ENST00000543091 LRRC9Q6ZRR7 1453 aa10.87□□□□□ -0.67
LRP6-206ENST00000543091 PBRM1Q86U86 1689 aa10.87□□□□□ -0.67
LRP6-206ENST00000543091 RGL3Q3MIN7 710 aa10.86□□□□□ -0.67
LRP6-206ENST00000543091 WASHC2CQ9Y4E1 1318 aa10.86□□□□□ -0.67
LRP6-206ENST00000543091 ARHGAP5Q13017 1502 aa10.86□□□□□ -0.67
LRP6-206ENST00000543091 CNGB1Q14028 1251 aaPredicted RBP10.86□□□□□ -0.67
LRP6-206ENST00000543091 PLB1Q6P1J6 1458 aa10.86□□□□□ -0.67
LRP6-206ENST00000543091 PLEKHH2Q8IVE3 1493 aa10.86□□□□□ -0.67
LRP6-206ENST00000543091 NUP155O75694 1391 aa10.85□□□□□ -0.67
LRP6-206ENST00000543091 EPRSP07814 1512 aaKnown RBP10.85□□□□□ -0.67
LRP6-206ENST00000543091 EHBP1L1Q8N3D4 1523 aa10.85□□□□□ -0.67
LRP6-206ENST00000543091 NCOA2Q15596 1464 aa10.85□□□□□ -0.67
LRP6-206ENST00000543091 CENPBP07199 599 aaPredicted RBP10.84□□□□□ -0.67
LRP6-206ENST00000543091 FGD6Q6ZV73 1430 aa10.83□□□□□ -0.68
LRP6-206ENST00000543091 UGGT2Q9NYU1 1516 aa10.83□□□□□ -0.68
LRP6-206ENST00000543091 C14orf37Q86TY3 774 aa10.82□□□□□ -0.68
LRP6-206ENST00000543091 PKD2Q13563 968 aa10.82□□□□□ -0.68
LRP6-206ENST00000543091 CD109Q6YHK3 1445 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms