RNA–Protein interactions for RNA: ENST00000543042.5

CLPB-212, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-212ENST00000543042 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
CLPB-212ENST00000543042 FHOD3Q2V2M9 1422 aa27.43■■□□□ 1.98
CLPB-212ENST00000543042 PBRM1Q86U86 1689 aa27.42■■□□□ 1.98
CLPB-212ENST00000543042 CTTNBP2Q8WZ74 1663 aa27.42■■□□□ 1.98
CLPB-212ENST00000543042 HNRNPUL2Q1KMD3 747 aaKnown RBP27.41■■□□□ 1.98
CLPB-212ENST00000543042 THOC2Q8NI27 1593 aaKnown RBP27.4■■□□□ 1.98
CLPB-212ENST00000543042 GRIN2BQ13224 1484 aa27.37■■□□□ 1.97
CLPB-212ENST00000543042 ATP1B4Q9UN42 357 aaPredicted RBP27.36■■□□□ 1.97
CLPB-212ENST00000543042 FHAD1B1AJZ9 1412 aa27.36■■□□□ 1.97
CLPB-212ENST00000543042 ZEB1P37275 1124 aaPredicted RBP27.34■■□□□ 1.97
CLPB-212ENST00000543042 CCER1Q8TC90 406 aaPredicted RBP27.34■■□□□ 1.97
CLPB-212ENST00000543042 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
CLPB-212ENST00000543042 EFCAB5A4FU69 1503 aa27.29■■□□□ 1.96
CLPB-212ENST00000543042 PCF11O94913 1555 aaKnown RBP27.27■■□□□ 1.96
CLPB-212ENST00000543042 EIF4G3O43432 1585 aaKnown RBP27.25■■□□□ 1.95
CLPB-212ENST00000543042 TIAM1Q13009 1591 aa27.24■■□□□ 1.95
CLPB-212ENST00000543042 SNAPC4Q5SXM2 1469 aa27.23■■□□□ 1.95
CLPB-212ENST00000543042 SAMD9Q5K651 1589 aa27.2■■□□□ 1.94
CLPB-212ENST00000543042 CASKIN1Q8WXD9 1431 aa27.17■■□□□ 1.94
CLPB-212ENST00000543042 MAP3K1Q13233 1512 aa27.16■■□□□ 1.94
CLPB-212ENST00000543042 LRRC9Q6ZRR7 1453 aa27.16■■□□□ 1.94
CLPB-212ENST00000543042 FMN1Q68DA7 1419 aa27.14■■□□□ 1.94
CLPB-212ENST00000543042 FYCO1Q9BQS8 1478 aa27.13■■□□□ 1.93
CLPB-212ENST00000543042 IQGAP2Q13576 1575 aa27.12■■□□□ 1.93
CLPB-212ENST00000543042 RRBP1Q9P2E9 1410 aaKnown RBP27.12■■□□□ 1.93
CLPB-212ENST00000543042 FBLN2P98095 1184 aa27.11■■□□□ 1.93
CLPB-212ENST00000543042 GRIN2AQ12879 1464 aa27.08■■□□□ 1.93
CLPB-212ENST00000543042 CHMP7Q8WUX9 453 aaPredicted RBP27.08■■□□□ 1.93
CLPB-212ENST00000543042 CFAP43Q8NDM7 1665 aa27.07■■□□□ 1.92
CLPB-212ENST00000543042 CCNB3Q8WWL7 1395 aa27.06■■□□□ 1.92
CLPB-212ENST00000543042 PHLDB1Q86UU1 1377 aa27.06■■□□□ 1.92
CLPB-212ENST00000543042 ITGAEP38570 1179 aa27.05■■□□□ 1.92
CLPB-212ENST00000543042 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
CLPB-212ENST00000543042 KIAA0586Q9BVV6 1533 aa27.01■■□□□ 1.91
CLPB-212ENST00000543042 SYNJ2O15056 1496 aa26.99■■□□□ 1.91
CLPB-212ENST00000543042 LRRIQ1Q96JM4 1722 aa26.98■■□□□ 1.91
CLPB-212ENST00000543042 UGGT2Q9NYU1 1516 aa26.96■■□□□ 1.91
CLPB-212ENST00000543042 ARID3CA6NKF2 412 aa26.94■■□□□ 1.9
CLPB-212ENST00000543042 CEP170Q5SW79 1584 aa26.93■■□□□ 1.9
CLPB-212ENST00000543042 DISP1Q96F81 1524 aa26.92■■□□□ 1.9
CLPB-212ENST00000543042 FAM50AQ14320 339 aaKnown RBP26.91■■□□□ 1.9
CLPB-212ENST00000543042 MTUS2Q5JR59 1369 aa26.9■■□□□ 1.9
CLPB-212ENST00000543042 KIAA0556O60303 1618 aa26.84■■□□□ 1.89
CLPB-212ENST00000543042 NUP160Q12769 1436 aa26.82■■□□□ 1.88
CLPB-212ENST00000543042 JPH4Q96JJ6 628 aa26.81■■□□□ 1.88
CLPB-212ENST00000543042 MAGI3Q5TCQ9 1506 aa26.81■■□□□ 1.88
CLPB-212ENST00000543042 EPRSP07814 1512 aaKnown RBP26.79■■□□□ 1.88
CLPB-212ENST00000543042 CDK13Q14004 1512 aaKnown RBP26.79■■□□□ 1.88
CLPB-212ENST00000543042 HECW1Q76N89 1606 aa26.77■■□□□ 1.88
CLPB-212ENST00000543042 NCOA2Q15596 1464 aa26.76■■□□□ 1.87
CLPB-212ENST00000543042 DHX57Q6P158 1386 aaKnown RBP26.74■■□□□ 1.87
CLPB-212ENST00000543042 CCDC18Q5T9S5 1454 aa26.74■■□□□ 1.87
CLPB-212ENST00000543042 FGD6Q6ZV73 1430 aa26.72■■□□□ 1.87
CLPB-212ENST00000543042 EHBP1L1Q8N3D4 1523 aa26.7■■□□□ 1.87
CLPB-212ENST00000543042 RAB3GAP2Q9H2M9 1393 aa26.68■■□□□ 1.86
CLPB-212ENST00000543042 NUP153P49790 1475 aaKnown RBP26.67■■□□□ 1.86
CLPB-212ENST00000543042 SUPT6HQ7KZ85 1726 aaKnown RBP26.66■■□□□ 1.86
CLPB-212ENST00000543042 PLB1Q6P1J6 1458 aa26.66■■□□□ 1.86
CLPB-212ENST00000543042 MYOM3Q5VTT5 1437 aa26.65■■□□□ 1.86
CLPB-212ENST00000543042 CARMIL2Q6F5E8 1435 aa26.64■■□□□ 1.85
CLPB-212ENST00000543042 RAPGEF6Q8TEU7 1601 aa26.63■■□□□ 1.85
CLPB-212ENST00000543042 SETD5Q9C0A6 1442 aa26.62■■□□□ 1.85
CLPB-212ENST00000543042 ARHGEF11O15085 1522 aa26.61■■□□□ 1.85
CLPB-212ENST00000543042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.61■■□□□ 1.85
CLPB-212ENST00000543042 CHD1O14646 1710 aa26.6■■□□□ 1.85
CLPB-212ENST00000543042 PTPRKQ15262 1439 aa26.59■■□□□ 1.85
CLPB-212ENST00000543042 PRG4Q92954 1404 aaPredicted RBP26.55■■□□□ 1.84
CLPB-212ENST00000543042 CLSPNQ9HAW4 1339 aa26.51■■□□□ 1.83
CLPB-212ENST00000543042 PTPN23Q9H3S7 1636 aa26.5■■□□□ 1.83
CLPB-212ENST00000543042 CDK11AQ9UQ88 783 aaPredicted RBP26.48■■□□□ 1.83
CLPB-212ENST00000543042 CHIC2Q9UKJ5 165 aa26.45■■□□□ 1.82
CLPB-212ENST00000543042 PTPRGP23470 1445 aa26.42■■□□□ 1.82
CLPB-212ENST00000543042 ABCA8O94911 1581 aa26.42■■□□□ 1.82
CLPB-212ENST00000543042 ZNF644Q9H582 1327 aaPredicted RBP26.41■■□□□ 1.82
CLPB-212ENST00000543042 TCOF1Q13428 1488 aaKnown RBP26.41■■□□□ 1.82
CLPB-212ENST00000543042 MAPKBP1O60336 1514 aa26.41■■□□□ 1.82
CLPB-212ENST00000543042 TROQ12816 1431 aaPredicted RBP26.4■■□□□ 1.82
CLPB-212ENST00000543042 MIA2Q96PC5 1412 aa26.39■■□□□ 1.81
CLPB-212ENST00000543042 RRP7BPQ9NSQ0 103 aa26.38■■□□□ 1.81
CLPB-212ENST00000543042 ERCC6L2Q5T890 1561 aa26.38■■□□□ 1.81
CLPB-212ENST00000543042 ATP10BO94823 1461 aa26.38■■□□□ 1.81
CLPB-212ENST00000543042 HFM1A2PYH4 1435 aa26.36■■□□□ 1.81
CLPB-212ENST00000543042 NAIPQ13075 1403 aa26.35■■□□□ 1.81
CLPB-212ENST00000543042 ZNF316A6NFI3 1004 aaPredicted RBP26.35■■□□□ 1.81
CLPB-212ENST00000543042 KIF14Q15058 1648 aa26.33■■□□□ 1.81
CLPB-212ENST00000543042 PLEKHD1A6NEE1 506 aa26.33■■□□□ 1.81
CLPB-212ENST00000543042 SHROOM2Q13796 1616 aa26.33■■□□□ 1.8
CLPB-212ENST00000543042 SIN3AQ96ST3 1273 aa26.32■■□□□ 1.8
CLPB-212ENST00000543042 NEUROD1Q13562 356 aa26.27■■□□□ 1.8
CLPB-212ENST00000543042 DIEXFQ68CQ4 756 aaKnown RBP26.27■■□□□ 1.8
CLPB-212ENST00000543042 CFDP1Q9UEE9 299 aaPredicted RBP26.27■■□□□ 1.8
CLPB-212ENST00000543042 ZNF777Q9ULD5 760 aaPredicted RBP26.27■■□□□ 1.8
CLPB-212ENST00000543042 GPATCH8Q9UKJ3 1502 aaKnown RBP26.26■■□□□ 1.79
CLPB-212ENST00000543042 CLASP1Q7Z460 1538 aa26.23■■□□□ 1.79
CLPB-212ENST00000543042 UACAQ9BZF9 1416 aa26.23■■□□□ 1.79
CLPB-212ENST00000543042 ABCC5O15440 1437 aa26.22■■□□□ 1.79
CLPB-212ENST00000543042 DAPK1P53355 1430 aa26.22■■□□□ 1.79
CLPB-212ENST00000543042 ADCY10Q96PN6 1610 aa26.21■■□□□ 1.79
CLPB-212ENST00000543042 KDM6BO15054 1643 aa26.19■■□□□ 1.78
CLPB-212ENST00000543042 CAMSAP2Q08AD1 1489 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms