RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 FHOD3Q2V2M9 1422 aa20.47■□□□□ 0.87
SLC3A2-220ENST00000542922 CCNB3Q8WWL7 1395 aa20.44■□□□□ 0.86
SLC3A2-220ENST00000542922 DIEXFQ68CQ4 756 aaKnown RBP20.42■□□□□ 0.86
SLC3A2-220ENST00000542922 MAP3K1Q13233 1512 aa20.42■□□□□ 0.86
SLC3A2-220ENST00000542922 CFAP43Q8NDM7 1665 aa20.41■□□□□ 0.86
SLC3A2-220ENST00000542922 LRRC9Q6ZRR7 1453 aa20.41■□□□□ 0.86
SLC3A2-220ENST00000542922 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
SLC3A2-220ENST00000542922 DHX57Q6P158 1386 aaKnown RBP20.4■□□□□ 0.86
SLC3A2-220ENST00000542922 FHAD1B1AJZ9 1412 aa20.4■□□□□ 0.86
SLC3A2-220ENST00000542922 ITGAEP38570 1179 aa20.38■□□□□ 0.85
SLC3A2-220ENST00000542922 EFCAB5A4FU69 1503 aa20.38■□□□□ 0.85
SLC3A2-220ENST00000542922 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
SLC3A2-220ENST00000542922 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
SLC3A2-220ENST00000542922 PHLDB1Q86UU1 1377 aa20.36■□□□□ 0.85
SLC3A2-220ENST00000542922 ZNF316A6NFI3 1004 aaPredicted RBP20.35■□□□□ 0.85
SLC3A2-220ENST00000542922 FYCO1Q9BQS8 1478 aa20.32■□□□□ 0.84
SLC3A2-220ENST00000542922 CASKIN1Q8WXD9 1431 aa20.29■□□□□ 0.84
SLC3A2-220ENST00000542922 SAMD9Q5K651 1589 aa20.28■□□□□ 0.84
SLC3A2-220ENST00000542922 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
SLC3A2-220ENST00000542922 SNAPC4Q5SXM2 1469 aa20.27■□□□□ 0.84
SLC3A2-220ENST00000542922 AQRO60306 1485 aaKnown RBP eCLIP20.26■□□□□ 0.832e-12■■■■□ 22.1
SLC3A2-220ENST00000542922 LRRIQ1Q96JM4 1722 aa20.25■□□□□ 0.83
SLC3A2-220ENST00000542922 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
SLC3A2-220ENST00000542922 CLSPNQ9HAW4 1339 aa20.22■□□□□ 0.83
SLC3A2-220ENST00000542922 RAB3GAP2Q9H2M9 1393 aa20.22■□□□□ 0.83
SLC3A2-220ENST00000542922 FMN1Q68DA7 1419 aa20.21■□□□□ 0.83
SLC3A2-220ENST00000542922 FAM50AQ14320 339 aaKnown RBP20.21■□□□□ 0.83
SLC3A2-220ENST00000542922 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
SLC3A2-220ENST00000542922 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
SLC3A2-220ENST00000542922 GRIN2BQ13224 1484 aa20.15■□□□□ 0.82
SLC3A2-220ENST00000542922 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
SLC3A2-220ENST00000542922 MAPKBP1O60336 1514 aa20.14■□□□□ 0.82
SLC3A2-220ENST00000542922 SETD5Q9C0A6 1442 aa20.13■□□□□ 0.81
SLC3A2-220ENST00000542922 WDR62O43379 1518 aa20.1■□□□□ 0.81
SLC3A2-220ENST00000542922 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
SLC3A2-220ENST00000542922 IQGAP2Q13576 1575 aa20.09■□□□□ 0.81
SLC3A2-220ENST00000542922 NEUROD1Q13562 356 aa20.09■□□□□ 0.81
SLC3A2-220ENST00000542922 FGD6Q6ZV73 1430 aa20.08■□□□□ 0.8
SLC3A2-220ENST00000542922 MIER1Q8N108 512 aa20.07■□□□□ 0.8
SLC3A2-220ENST00000542922 IFT140Q96RY7 1462 aa20.06■□□□□ 0.8
SLC3A2-220ENST00000542922 MAGI3Q5TCQ9 1506 aa20.06■□□□□ 0.8
SLC3A2-220ENST00000542922 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
SLC3A2-220ENST00000542922 ACIN1Q9UKV3 1341 aaKnown RBP20.04■□□□□ 0.8
SLC3A2-220ENST00000542922 NCOA2Q15596 1464 aa20.04■□□□□ 0.8
SLC3A2-220ENST00000542922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.01■□□□□ 0.79
SLC3A2-220ENST00000542922 EIF4G3O43432 1585 aaKnown RBP20.01■□□□□ 0.79
SLC3A2-220ENST00000542922 SUPT6HQ7KZ85 1726 aaKnown RBP20■□□□□ 0.79
SLC3A2-220ENST00000542922 PTPRKQ15262 1439 aa20■□□□□ 0.79
SLC3A2-220ENST00000542922 EHBP1L1Q8N3D4 1523 aa20■□□□□ 0.79
SLC3A2-220ENST00000542922 ERCC6Q03468 1493 aa19.98■□□□□ 0.79
SLC3A2-220ENST00000542922 MYOM3Q5VTT5 1437 aa19.97■□□□□ 0.79
SLC3A2-220ENST00000542922 HECW1Q76N89 1606 aa19.97■□□□□ 0.79
SLC3A2-220ENST00000542922 CDK13Q14004 1512 aaKnown RBP19.97■□□□□ 0.79
SLC3A2-220ENST00000542922 UGGT2Q9NYU1 1516 aa19.96■□□□□ 0.79
SLC3A2-220ENST00000542922 ARID3CA6NKF2 412 aa19.96■□□□□ 0.79
SLC3A2-220ENST00000542922 SIN3AQ96ST3 1273 aa19.96■□□□□ 0.79
SLC3A2-220ENST00000542922 YTHDC1Q96MU7 727 aaKnown RBP19.95■□□□□ 0.78
SLC3A2-220ENST00000542922 CCDC18Q5T9S5 1454 aa19.94■□□□□ 0.78
SLC3A2-220ENST00000542922 ARHGEF11O15085 1522 aa19.94■□□□□ 0.78
SLC3A2-220ENST00000542922 EPRSP07814 1512 aaKnown RBP19.94■□□□□ 0.78
SLC3A2-220ENST00000542922 PTPN23Q9H3S7 1636 aa19.92■□□□□ 0.78
SLC3A2-220ENST00000542922 CENPBP07199 599 aaPredicted RBP19.92■□□□□ 0.78
SLC3A2-220ENST00000542922 GRIN2AQ12879 1464 aa19.91■□□□□ 0.78
SLC3A2-220ENST00000542922 DISP1Q96F81 1524 aa19.9■□□□□ 0.78
SLC3A2-220ENST00000542922 KIAA0556O60303 1618 aa19.9■□□□□ 0.78
SLC3A2-220ENST00000542922 KIAA0586Q9BVV6 1533 aa19.89■□□□□ 0.77
SLC3A2-220ENST00000542922 HFM1A2PYH4 1435 aa19.87■□□□□ 0.77
SLC3A2-220ENST00000542922 NAIPQ13075 1403 aa19.85■□□□□ 0.77
SLC3A2-220ENST00000542922 CEP170Q5SW79 1584 aa19.83■□□□□ 0.77
SLC3A2-220ENST00000542922 GTF3C3Q9Y5Q9 886 aa19.81■□□□□ 0.76
SLC3A2-220ENST00000542922 TCOF1Q13428 1488 aaKnown RBP19.81■□□□□ 0.76
SLC3A2-220ENST00000542922 MAGI1Q96QZ7 1491 aaPredicted RBP19.8■□□□□ 0.76
SLC3A2-220ENST00000542922 NUP153P49790 1475 aaKnown RBP19.8■□□□□ 0.76
SLC3A2-220ENST00000542922 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
SLC3A2-220ENST00000542922 UACAQ9BZF9 1416 aa19.78■□□□□ 0.76
SLC3A2-220ENST00000542922 RAPGEF6Q8TEU7 1601 aa19.78■□□□□ 0.76
SLC3A2-220ENST00000542922 RRP7BPQ9NSQ0 103 aa19.77■□□□□ 0.76
SLC3A2-220ENST00000542922 SYNJ2O15056 1496 aa19.77■□□□□ 0.76
SLC3A2-220ENST00000542922 FBLN2P98095 1184 aa19.76■□□□□ 0.75
SLC3A2-220ENST00000542922 CHMP7Q8WUX9 453 aaPredicted RBP19.76■□□□□ 0.75
SLC3A2-220ENST00000542922 KDM6BO15054 1643 aa19.76■□□□□ 0.75
SLC3A2-220ENST00000542922 GCC2Q8IWJ2 1684 aa19.75■□□□□ 0.75
SLC3A2-220ENST00000542922 PLB1Q6P1J6 1458 aa19.71■□□□□ 0.75
SLC3A2-220ENST00000542922 MIA2Q96PC5 1412 aa19.71■□□□□ 0.75
SLC3A2-220ENST00000542922 PPP1R15AO75807 674 aaPredicted RBP19.7■□□□□ 0.74
SLC3A2-220ENST00000542922 DENND4BO75064 1496 aaPredicted RBP19.68■□□□□ 0.74
SLC3A2-220ENST00000542922 NUP160Q12769 1436 aa19.68■□□□□ 0.74
SLC3A2-220ENST00000542922 HIRIP3Q9BW71 556 aaPredicted RBP19.67■□□□□ 0.74
SLC3A2-220ENST00000542922 TIMELESSQ9UNS1 1208 aa19.67■□□□□ 0.74
SLC3A2-220ENST00000542922 ZNF644Q9H582 1327 aaPredicted RBP19.67■□□□□ 0.74
SLC3A2-220ENST00000542922 PRG4Q92954 1404 aaPredicted RBP19.66■□□□□ 0.74
SLC3A2-220ENST00000542922 TONSLQ96HA7 1378 aa19.65■□□□□ 0.74
SLC3A2-220ENST00000542922 AKNAQ7Z591 1439 aa19.64■□□□□ 0.74
SLC3A2-220ENST00000542922 DAPK1P53355 1430 aa19.63■□□□□ 0.73
SLC3A2-220ENST00000542922 JPH4Q96JJ6 628 aa19.63■□□□□ 0.73
SLC3A2-220ENST00000542922 KDM5BQ9UGL1 1544 aa19.62■□□□□ 0.73
SLC3A2-220ENST00000542922 DNMT1P26358 1616 aaKnown RBP19.62■□□□□ 0.73
SLC3A2-220ENST00000542922 KIF14Q15058 1648 aa19.62■□□□□ 0.73
SLC3A2-220ENST00000542922 TRIM52Q96A61 297 aa19.61■□□□□ 0.73
SLC3A2-220ENST00000542922 ABCC5O15440 1437 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms