RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 RANGAP1P46060 587 aaPredicted RBP12.87□□□□□ -0.35
MRPL40P1-201ENST00000542687 NUP160Q12769 1436 aa12.82□□□□□ -0.36
MRPL40P1-201ENST00000542687 CHD1O14646 1710 aa12.82□□□□□ -0.36
MRPL40P1-201ENST00000542687 RIMBP3CA6NJZ7 1639 aa12.81□□□□□ -0.36
MRPL40P1-201ENST00000542687 RIMBP3BA6NNM3 1639 aa12.81□□□□□ -0.36
MRPL40P1-201ENST00000542687 RIMBP3Q9UFD9 1639 aa12.81□□□□□ -0.36
MRPL40P1-201ENST00000542687 KIAA0586Q9BVV6 1533 aa12.81□□□□□ -0.36
MRPL40P1-201ENST00000542687 JPH4Q96JJ6 628 aa12.79□□□□□ -0.36
MRPL40P1-201ENST00000542687 CEP162Q5TB80 1403 aa12.79□□□□□ -0.36
MRPL40P1-201ENST00000542687 CLIP1P30622 1438 aa12.78□□□□□ -0.36
MRPL40P1-201ENST00000542687 ARHGEF11O15085 1522 aa12.78□□□□□ -0.36
MRPL40P1-201ENST00000542687 CEP170Q5SW79 1584 aa12.76□□□□□ -0.37
MRPL40P1-201ENST00000542687 P3H3Q8IVL6 736 aa12.75□□□□□ -0.37
MRPL40P1-201ENST00000542687 IQGAP2Q13576 1575 aa12.73□□□□□ -0.37
MRPL40P1-201ENST00000542687 CARMIL2Q6F5E8 1435 aa12.7□□□□□ -0.38
MRPL40P1-201ENST00000542687 UGGT2Q9NYU1 1516 aa12.69□□□□□ -0.38
MRPL40P1-201ENST00000542687 ARHGAP35Q9NRY4 1499 aa12.69□□□□□ -0.38
MRPL40P1-201ENST00000542687 PRG4Q92954 1404 aaPredicted RBP12.69□□□□□ -0.38
MRPL40P1-201ENST00000542687 CTTNBP2Q8WZ74 1663 aa12.68□□□□□ -0.38
MRPL40P1-201ENST00000542687 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
MRPL40P1-201ENST00000542687 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
MRPL40P1-201ENST00000542687 FHOD3Q2V2M9 1422 aa12.66□□□□□ -0.38
MRPL40P1-201ENST00000542687 TTBK1Q5TCY1 1321 aaPredicted RBP12.65□□□□□ -0.38
MRPL40P1-201ENST00000542687 ARAP1Q96P48 1450 aa12.65□□□□□ -0.38
MRPL40P1-201ENST00000542687 DISP1Q96F81 1524 aa12.64□□□□□ -0.39
MRPL40P1-201ENST00000542687 CYB5RLQ6IPT4 315 aa12.63□□□□□ -0.39
MRPL40P1-201ENST00000542687 FMN1Q68DA7 1419 aa12.62□□□□□ -0.39
MRPL40P1-201ENST00000542687 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
MRPL40P1-201ENST00000542687 SAMD9Q5K651 1589 aa12.61□□□□□ -0.39
MRPL40P1-201ENST00000542687 ATP1B4Q9UN42 357 aaPredicted RBP12.61□□□□□ -0.39
MRPL40P1-201ENST00000542687 PTPRGP23470 1445 aa12.61□□□□□ -0.39
MRPL40P1-201ENST00000542687 APLP2Q06481 763 aa12.6□□□□□ -0.39
MRPL40P1-201ENST00000542687 KIAA0556O60303 1618 aa12.59□□□□□ -0.39
MRPL40P1-201ENST00000542687 SHROOM2Q13796 1616 aa12.59□□□□□ -0.39
MRPL40P1-201ENST00000542687 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
MRPL40P1-201ENST00000542687 ERCC6L2Q5T890 1561 aa12.54□□□□□ -0.4
MRPL40P1-201ENST00000542687 ARID3CA6NKF2 412 aa12.5□□□□□ -0.41
MRPL40P1-201ENST00000542687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.5□□□□□ -0.41
MRPL40P1-201ENST00000542687 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
MRPL40P1-201ENST00000542687 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
MRPL40P1-201ENST00000542687 UACAQ9BZF9 1416 aa12.5□□□□□ -0.41
MRPL40P1-201ENST00000542687 PLB1Q6P1J6 1458 aa12.5□□□□□ -0.41
MRPL40P1-201ENST00000542687 FYCO1Q9BQS8 1478 aa12.49□□□□□ -0.41
MRPL40P1-201ENST00000542687 PPARGC1BQ86YN6 1023 aaKnown RBP12.47□□□□□ -0.41
MRPL40P1-201ENST00000542687 CDK11AQ9UQ88 783 aaPredicted RBP12.47□□□□□ -0.41
MRPL40P1-201ENST00000542687 PCF11O94913 1555 aaKnown RBP12.45□□□□□ -0.42
MRPL40P1-201ENST00000542687 NPM1P06748 294 aaKnown RBP eCLIP12.45□□□□□ -0.42
MRPL40P1-201ENST00000542687 NUP153P49790 1475 aaKnown RBP12.45□□□□□ -0.42
MRPL40P1-201ENST00000542687 ABCA8O94911 1581 aa12.44□□□□□ -0.42
MRPL40P1-201ENST00000542687 KANK4Q5T7N3 995 aaPredicted RBP12.44□□□□□ -0.42
MRPL40P1-201ENST00000542687 UHRF1BP1LA0JNW5 1464 aa12.44□□□□□ -0.42
MRPL40P1-201ENST00000542687 CCDC18Q5T9S5 1454 aa12.43□□□□□ -0.42
MRPL40P1-201ENST00000542687 PLEKHD1A6NEE1 506 aa12.43□□□□□ -0.42
MRPL40P1-201ENST00000542687 HECW1Q76N89 1606 aa12.43□□□□□ -0.42
MRPL40P1-201ENST00000542687 RAPGEF6Q8TEU7 1601 aa12.43□□□□□ -0.42
MRPL40P1-201ENST00000542687 EPRSP07814 1512 aaKnown RBP12.42□□□□□ -0.42
MRPL40P1-201ENST00000542687 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
MRPL40P1-201ENST00000542687 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
MRPL40P1-201ENST00000542687 ATP10BO94823 1461 aa12.41□□□□□ -0.42
MRPL40P1-201ENST00000542687 MTUS2Q5JR59 1369 aa12.4□□□□□ -0.42
MRPL40P1-201ENST00000542687 CDK13Q14004 1512 aaKnown RBP12.38□□□□□ -0.43
MRPL40P1-201ENST00000542687 TIAM1Q13009 1591 aa12.38□□□□□ -0.43
MRPL40P1-201ENST00000542687 LRRC9Q6ZRR7 1453 aa12.37□□□□□ -0.43
MRPL40P1-201ENST00000542687 KDM5BQ9UGL1 1544 aa12.37□□□□□ -0.43
MRPL40P1-201ENST00000542687 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
MRPL40P1-201ENST00000542687 ADCY10Q96PN6 1610 aa12.33□□□□□ -0.43
MRPL40P1-201ENST00000542687 TROQ12816 1431 aaPredicted RBP12.33□□□□□ -0.44
MRPL40P1-201ENST00000542687 EHBP1L1Q8N3D4 1523 aa12.3□□□□□ -0.44
MRPL40P1-201ENST00000542687 ASXL2Q76L83 1435 aa12.29□□□□□ -0.44
MRPL40P1-201ENST00000542687 CFAP43Q8NDM7 1665 aa12.29□□□□□ -0.44
MRPL40P1-201ENST00000542687 MAGI3Q5TCQ9 1506 aa12.29□□□□□ -0.44
MRPL40P1-201ENST00000542687 TRIM26Q12899 539 aaPredicted RBP12.28□□□□□ -0.44
MRPL40P1-201ENST00000542687 ZCCHC11Q5TAX3 1644 aaKnown RBP12.27□□□□□ -0.44
MRPL40P1-201ENST00000542687 CCNB3Q8WWL7 1395 aa12.27□□□□□ -0.45
MRPL40P1-201ENST00000542687 NCOA2Q15596 1464 aa12.27□□□□□ -0.45
MRPL40P1-201ENST00000542687 WDR7Q9Y4E6 1490 aa12.27□□□□□ -0.45
MRPL40P1-201ENST00000542687 LRRIQ1Q96JM4 1722 aa12.26□□□□□ -0.45
MRPL40P1-201ENST00000542687 PHLDB1Q86UU1 1377 aa12.26□□□□□ -0.45
MRPL40P1-201ENST00000542687 CFDP1Q9UEE9 299 aaPredicted RBP12.24□□□□□ -0.45
MRPL40P1-201ENST00000542687 KIF13AQ9H1H9 1805 aa12.23□□□□□ -0.45
MRPL40P1-201ENST00000542687 MAPKBP1O60336 1514 aa12.22□□□□□ -0.45
MRPL40P1-201ENST00000542687 MYOM3Q5VTT5 1437 aa12.21□□□□□ -0.45
MRPL40P1-201ENST00000542687 SUPT6HQ7KZ85 1726 aaKnown RBP12.21□□□□□ -0.45
MRPL40P1-201ENST00000542687 FAM69CQ0P6D2 419 aa12.21□□□□□ -0.45
MRPL40P1-201ENST00000542687 FAM50AQ14320 339 aaKnown RBP12.21□□□□□ -0.45
MRPL40P1-201ENST00000542687 KIF14Q15058 1648 aa12.21□□□□□ -0.46
MRPL40P1-201ENST00000542687 ABCC10Q5T3U5 1492 aa12.21□□□□□ -0.46
MRPL40P1-201ENST00000542687 ZNF777Q9ULD5 760 aaPredicted RBP12.2□□□□□ -0.46
MRPL40P1-201ENST00000542687 GPATCH8Q9UKJ3 1502 aaKnown RBP12.2□□□□□ -0.46
MRPL40P1-201ENST00000542687 EFCAB2Q5VUJ9 269 aa12.19□□□□□ -0.46
MRPL40P1-201ENST00000542687 PCGF6Q9BYE7 350 aa12.19□□□□□ -0.46
MRPL40P1-201ENST00000542687 FGD6Q6ZV73 1430 aa12.19□□□□□ -0.46
MRPL40P1-201ENST00000542687 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
MRPL40P1-201ENST00000542687 DIP2BQ9P265 1576 aa12.18□□□□□ -0.46
MRPL40P1-201ENST00000542687 RRBP1Q9P2E9 1410 aaKnown RBP12.18□□□□□ -0.46
MRPL40P1-201ENST00000542687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.17□□□□□ -0.46
MRPL40P1-201ENST00000542687 PLCH2O75038 1416 aa12.17□□□□□ -0.46
MRPL40P1-201ENST00000542687 CD109Q6YHK3 1445 aa12.16□□□□□ -0.46
MRPL40P1-201ENST00000542687 ZNF644Q9H582 1327 aaPredicted RBP12.15□□□□□ -0.46
MRPL40P1-201ENST00000542687 ITGAEP38570 1179 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms