RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CTTNBP2Q8WZ74 1663 aa9.78□□□□□ -0.84
PTPRO-208ENST00000542557 URB2Q14146 1524 aaKnown RBP9.78□□□□□ -0.84
PTPRO-208ENST00000542557 ABCA5Q8WWZ7 1642 aa9.77□□□□□ -0.85
PTPRO-208ENST00000542557 CCNB3Q8WWL7 1395 aa9.76□□□□□ -0.85
PTPRO-208ENST00000542557 PDS5BQ9NTI5 1447 aa9.75□□□□□ -0.85
PTPRO-208ENST00000542557 DIEXFQ68CQ4 756 aaKnown RBP9.75□□□□□ -0.85
PTPRO-208ENST00000542557 PCF11O94913 1555 aaKnown RBP9.75□□□□□ -0.85
PTPRO-208ENST00000542557 AQRO60306 1485 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTPRO-208ENST00000542557 LRRC9Q6ZRR7 1453 aa9.74□□□□□ -0.85
PTPRO-208ENST00000542557 ZNF316A6NFI3 1004 aaPredicted RBP9.74□□□□□ -0.85
PTPRO-208ENST00000542557 DHX57Q6P158 1386 aaKnown RBP9.74□□□□□ -0.85
PTPRO-208ENST00000542557 FYCO1Q9BQS8 1478 aa9.74□□□□□ -0.85
PTPRO-208ENST00000542557 RTN4Q9NQC3 1192 aaKnown RBP9.73□□□□□ -0.85
PTPRO-208ENST00000542557 KIF21AQ7Z4S6 1674 aa9.72□□□□□ -0.85
PTPRO-208ENST00000542557 AMER1Q5JTC6 1135 aaPredicted RBP9.71□□□□□ -0.85
PTPRO-208ENST00000542557 CASKIN1Q8WXD9 1431 aa9.71□□□□□ -0.86
PTPRO-208ENST00000542557 SAMD9Q5K651 1589 aa9.7□□□□□ -0.86
PTPRO-208ENST00000542557 GAPVD1Q14C86 1478 aa9.69□□□□□ -0.86
PTPRO-208ENST00000542557 PLPPR3Q6T4P5 718 aa9.69□□□□□ -0.86
PTPRO-208ENST00000542557 TARBP1Q13395 1621 aaKnown RBP9.69□□□□□ -0.86
PTPRO-208ENST00000542557 FHOD3Q2V2M9 1422 aa9.69□□□□□ -0.86
PTPRO-208ENST00000542557 FMN1Q68DA7 1419 aa9.68□□□□□ -0.86
PTPRO-208ENST00000542557 SNAPC4Q5SXM2 1469 aa9.67□□□□□ -0.86
PTPRO-208ENST00000542557 PHF23Q9BUL5 403 aaPredicted RBP9.67□□□□□ -0.86
PTPRO-208ENST00000542557 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
PTPRO-208ENST00000542557 PHLDB1Q86UU1 1377 aa9.66□□□□□ -0.86
PTPRO-208ENST00000542557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.66□□□□□ -0.86
PTPRO-208ENST00000542557 PBRM1Q86U86 1689 aa9.65□□□□□ -0.87
PTPRO-208ENST00000542557 TDRD9Q8NDG6 1382 aaKnown RBP9.64□□□□□ -0.87
PTPRO-208ENST00000542557 RAB3GAP2Q9H2M9 1393 aa9.63□□□□□ -0.87
PTPRO-208ENST00000542557 MRC2Q9UBG0 1479 aa9.62□□□□□ -0.87
PTPRO-208ENST00000542557 SCAF1Q9H7N4 1312 aaKnown RBP9.62□□□□□ -0.87
PTPRO-208ENST00000542557 SETD5Q9C0A6 1442 aa9.62□□□□□ -0.87
PTPRO-208ENST00000542557 ACIN1Q9UKV3 1341 aaKnown RBP9.62□□□□□ -0.87
PTPRO-208ENST00000542557 GRIN2BQ13224 1484 aa9.62□□□□□ -0.87
PTPRO-208ENST00000542557 ADAMTS12P58397 1594 aa9.62□□□□□ -0.87
PTPRO-208ENST00000542557 MAPKBP1O60336 1514 aa9.61□□□□□ -0.87
PTPRO-208ENST00000542557 CENPBP07199 599 aaPredicted RBP9.61□□□□□ -0.87
PTPRO-208ENST00000542557 P3H3Q8IVL6 736 aa9.61□□□□□ -0.87
PTPRO-208ENST00000542557 DNAJC5BQ9UF47 199 aa9.61□□□□□ -0.87
PTPRO-208ENST00000542557 LRRIQ1Q96JM4 1722 aa9.6□□□□□ -0.87
PTPRO-208ENST00000542557 EHBP1L1Q8N3D4 1523 aa9.59□□□□□ -0.87
PTPRO-208ENST00000542557 FGD6Q6ZV73 1430 aa9.58□□□□□ -0.88
PTPRO-208ENST00000542557 WDR62O43379 1518 aa9.58□□□□□ -0.88
PTPRO-208ENST00000542557 IQGAP2Q13576 1575 aa9.58□□□□□ -0.88
PTPRO-208ENST00000542557 CCDC18Q5T9S5 1454 aa9.57□□□□□ -0.88
PTPRO-208ENST00000542557 SUPT6HQ7KZ85 1726 aaKnown RBP9.57□□□□□ -0.88
PTPRO-208ENST00000542557 ITGAEP38570 1179 aa9.56□□□□□ -0.88
PTPRO-208ENST00000542557 NEUROD1Q13562 356 aa9.56□□□□□ -0.88
PTPRO-208ENST00000542557 IFT140Q96RY7 1462 aa9.56□□□□□ -0.88
PTPRO-208ENST00000542557 ARHGEF11O15085 1522 aa9.56□□□□□ -0.88
PTPRO-208ENST00000542557 HECW1Q76N89 1606 aa9.56□□□□□ -0.88
PTPRO-208ENST00000542557 MTUS2Q5JR59 1369 aa9.56□□□□□ -0.88
PTPRO-208ENST00000542557 FAM50AQ14320 339 aaKnown RBP9.55□□□□□ -0.88
PTPRO-208ENST00000542557 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
PTPRO-208ENST00000542557 NCOA2Q15596 1464 aa9.54□□□□□ -0.88
PTPRO-208ENST00000542557 UGGT2Q9NYU1 1516 aa9.54□□□□□ -0.88
PTPRO-208ENST00000542557 MYOM3Q5VTT5 1437 aa9.54□□□□□ -0.88
PTPRO-208ENST00000542557 MIER1Q8N108 512 aa9.52□□□□□ -0.88
PTPRO-208ENST00000542557 HFM1A2PYH4 1435 aa9.52□□□□□ -0.89
PTPRO-208ENST00000542557 TIMELESSQ9UNS1 1208 aa9.51□□□□□ -0.89
PTPRO-208ENST00000542557 MAGI3Q5TCQ9 1506 aa9.51□□□□□ -0.89
PTPRO-208ENST00000542557 PTPN23Q9H3S7 1636 aa9.51□□□□□ -0.89
PTPRO-208ENST00000542557 TCOF1Q13428 1488 aaKnown RBP9.5□□□□□ -0.89
PTPRO-208ENST00000542557 EPRSP07814 1512 aaKnown RBP9.49□□□□□ -0.89
PTPRO-208ENST00000542557 EIF4G3O43432 1585 aaKnown RBP9.49□□□□□ -0.89
PTPRO-208ENST00000542557 ZNF608Q9ULD9 1512 aaPredicted RBP9.49□□□□□ -0.89
PTPRO-208ENST00000542557 KIAA0586Q9BVV6 1533 aa9.49□□□□□ -0.89
PTPRO-208ENST00000542557 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
PTPRO-208ENST00000542557 KIAA0556O60303 1618 aa9.48□□□□□ -0.89
PTPRO-208ENST00000542557 AKNAQ7Z591 1439 aa9.48□□□□□ -0.89
PTPRO-208ENST00000542557 UACAQ9BZF9 1416 aa9.48□□□□□ -0.89
PTPRO-208ENST00000542557 GCC2Q8IWJ2 1684 aa9.47□□□□□ -0.89
PTPRO-208ENST00000542557 NAIPQ13075 1403 aa9.47□□□□□ -0.89
PTPRO-208ENST00000542557 GRIN2AQ12879 1464 aa9.47□□□□□ -0.89
PTPRO-208ENST00000542557 MIA2Q96PC5 1412 aa9.46□□□□□ -0.89
PTPRO-208ENST00000542557 MAGI1Q96QZ7 1491 aaPredicted RBP9.46□□□□□ -0.9
PTPRO-208ENST00000542557 DISP1Q96F81 1524 aa9.46□□□□□ -0.9
PTPRO-208ENST00000542557 GTF3C3Q9Y5Q9 886 aa9.45□□□□□ -0.9
PTPRO-208ENST00000542557 CDK13Q14004 1512 aaKnown RBP9.44□□□□□ -0.9
PTPRO-208ENST00000542557 ARXQ96QS3 562 aa9.43□□□□□ -0.9
PTPRO-208ENST00000542557 RAPGEF6Q8TEU7 1601 aa9.43□□□□□ -0.9
PTPRO-208ENST00000542557 MYT1Q01538 1121 aa9.43□□□□□ -0.9
PTPRO-208ENST00000542557 KCNA4P22459 653 aa9.42□□□□□ -0.9
PTPRO-208ENST00000542557 ERCC6Q03468 1493 aa9.42□□□□□ -0.9
PTPRO-208ENST00000542557 YTHDC1Q96MU7 727 aaKnown RBP9.42□□□□□ -0.9
PTPRO-208ENST00000542557 SIN3AQ96ST3 1273 aa9.42□□□□□ -0.9
PTPRO-208ENST00000542557 SYNJ2O15056 1496 aa9.41□□□□□ -0.9
PTPRO-208ENST00000542557 NUP153P49790 1475 aaKnown RBP9.41□□□□□ -0.9
PTPRO-208ENST00000542557 PELP1Q8IZL8 1130 aaKnown RBP9.41□□□□□ -0.9
PTPRO-208ENST00000542557 CEP170Q5SW79 1584 aa9.4□□□□□ -0.91
PTPRO-208ENST00000542557 PPP1R15AO75807 674 aaPredicted RBP9.39□□□□□ -0.91
PTPRO-208ENST00000542557 DNMT1P26358 1616 aaKnown RBP9.38□□□□□ -0.91
PTPRO-208ENST00000542557 TONSLQ96HA7 1378 aa9.38□□□□□ -0.91
PTPRO-208ENST00000542557 NUP160Q12769 1436 aa9.38□□□□□ -0.91
PTPRO-208ENST00000542557 ADCY10Q96PN6 1610 aa9.37□□□□□ -0.91
PTPRO-208ENST00000542557 ROCK1Q13464 1354 aa9.37□□□□□ -0.91
PTPRO-208ENST00000542557 KDM5BQ9UGL1 1544 aa9.37□□□□□ -0.91
PTPRO-208ENST00000542557 ITSN2Q9NZM3 1697 aa9.36□□□□□ -0.91
PTPRO-208ENST00000542557 DAPK1P53355 1430 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms