RNA–Protein interactions for RNA: ENST00000542449.1

LINC02417-201, Transcript of long intergenic non-protein coding RNA 2417, humanhuman

TSL 2 BASIC

Gene LINC02417, Length 515 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02417-201ENST00000542449 RUSC2Q8N2Y8 1516 aa23.89■■□□□ 1.42
LINC02417-201ENST00000542449 ERCC6L2Q5T890 1561 aa23.89■■□□□ 1.41
LINC02417-201ENST00000542449 KIAA0586Q9BVV6 1533 aa23.87■■□□□ 1.41
LINC02417-201ENST00000542449 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
LINC02417-201ENST00000542449 TTBK1Q5TCY1 1321 aaPredicted RBP23.82■■□□□ 1.4
LINC02417-201ENST00000542449 RAPGEF2Q9Y4G8 1499 aa23.81■■□□□ 1.4
LINC02417-201ENST00000542449 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
LINC02417-201ENST00000542449 NPM1P06748 294 aaKnown RBP eCLIP23.76■■□□□ 1.39
LINC02417-201ENST00000542449 CSRNP3Q8WYN3 585 aa23.72■■□□□ 1.39
LINC02417-201ENST00000542449 CARMIL2Q6F5E8 1435 aa23.71■■□□□ 1.39
LINC02417-201ENST00000542449 FAM9AQ8IZU1 332 aaPredicted RBP23.71■■□□□ 1.39
LINC02417-201ENST00000542449 PTPRGP23470 1445 aa23.67■■□□□ 1.38
LINC02417-201ENST00000542449 IQGAP2Q13576 1575 aa23.65■■□□□ 1.38
LINC02417-201ENST00000542449 TNIKQ9UKE5 1360 aa23.63■■□□□ 1.37
LINC02417-201ENST00000542449 PRXQ9BXM0 1461 aa23.61■■□□□ 1.37
LINC02417-201ENST00000542449 EEA1Q15075 1411 aa23.57■■□□□ 1.36
LINC02417-201ENST00000542449 DISP1Q96F81 1524 aa23.5■■□□□ 1.35
LINC02417-201ENST00000542449 UGGT2Q9NYU1 1516 aa23.5■■□□□ 1.35
LINC02417-201ENST00000542449 FAM69CQ0P6D2 419 aa23.5■■□□□ 1.35
LINC02417-201ENST00000542449 RANGAP1P46060 587 aaPredicted RBP23.49■■□□□ 1.35
LINC02417-201ENST00000542449 EHMT2Q96KQ7 1210 aa23.48■■□□□ 1.35
LINC02417-201ENST00000542449 P3H3Q8IVL6 736 aa23.47■■□□□ 1.35
LINC02417-201ENST00000542449 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
LINC02417-201ENST00000542449 ADCY10Q96PN6 1610 aa23.44■■□□□ 1.34
LINC02417-201ENST00000542449 UACAQ9BZF9 1416 aa23.44■■□□□ 1.34
LINC02417-201ENST00000542449 CTTNBP2Q8WZ74 1663 aa23.39■■□□□ 1.34
LINC02417-201ENST00000542449 KIAA0556O60303 1618 aa23.39■■□□□ 1.33
LINC02417-201ENST00000542449 UBTFP17480 764 aaKnown RBP23.38■■□□□ 1.33
LINC02417-201ENST00000542449 ABCC2Q92887 1545 aa23.37■■□□□ 1.33
LINC02417-201ENST00000542449 UHRF1BP1LA0JNW5 1464 aa23.36■■□□□ 1.33
LINC02417-201ENST00000542449 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
LINC02417-201ENST00000542449 MAPKBP1O60336 1514 aa23.35■■□□□ 1.33
LINC02417-201ENST00000542449 ASXL2Q76L83 1435 aa23.3■■□□□ 1.32
LINC02417-201ENST00000542449 PLB1Q6P1J6 1458 aa23.29■■□□□ 1.32
LINC02417-201ENST00000542449 ARID3CA6NKF2 412 aa23.28■■□□□ 1.32
LINC02417-201ENST00000542449 KDM5BQ9UGL1 1544 aa23.24■■□□□ 1.31
LINC02417-201ENST00000542449 KIF21BO75037 1637 aa23.22■■□□□ 1.31
LINC02417-201ENST00000542449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.22■■□□□ 1.31
LINC02417-201ENST00000542449 HNRNPUL2Q1KMD3 747 aaKnown RBP23.22■■□□□ 1.31
LINC02417-201ENST00000542449 KCNH8Q96L42 1107 aa23.22■■□□□ 1.31
LINC02417-201ENST00000542449 DIP2BQ9P265 1576 aa23.21■■□□□ 1.31
LINC02417-201ENST00000542449 KIF13AQ9H1H9 1805 aa23.19■■□□□ 1.3
LINC02417-201ENST00000542449 ABCA8O94911 1581 aa23.16■■□□□ 1.3
LINC02417-201ENST00000542449 FHOD3Q2V2M9 1422 aa23.16■■□□□ 1.3
LINC02417-201ENST00000542449 ZCCHC11Q5TAX3 1644 aaKnown RBP23.14■■□□□ 1.29
LINC02417-201ENST00000542449 SAMD9Q5K651 1589 aa23.12■■□□□ 1.29
LINC02417-201ENST00000542449 ATP1B4Q9UN42 357 aaPredicted RBP23.11■■□□□ 1.29
LINC02417-201ENST00000542449 EPRSP07814 1512 aaKnown RBP23.11■■□□□ 1.29
LINC02417-201ENST00000542449 WDR7Q9Y4E6 1490 aa23.11■■□□□ 1.29
LINC02417-201ENST00000542449 ATP10BO94823 1461 aa23.07■■□□□ 1.28
LINC02417-201ENST00000542449 GLI2P10070 1586 aa23.06■■□□□ 1.28
LINC02417-201ENST00000542449 TSPOAP1O95153 1857 aa23.05■■□□□ 1.28
LINC02417-201ENST00000542449 EFCAB5A4FU69 1503 aa23.04■■□□□ 1.28
LINC02417-201ENST00000542449 PLEKHD1A6NEE1 506 aa23.02■■□□□ 1.28
LINC02417-201ENST00000542449 RAPGEF6Q8TEU7 1601 aa23■■□□□ 1.27
LINC02417-201ENST00000542449 CD109Q6YHK3 1445 aa23■■□□□ 1.27
LINC02417-201ENST00000542449 AEBP2Q6ZN18 517 aaPredicted RBP22.99■■□□□ 1.27
LINC02417-201ENST00000542449 TEX14Q8IWB6 1497 aa22.97■■□□□ 1.27
LINC02417-201ENST00000542449 NUP153P49790 1475 aaKnown RBP22.96■■□□□ 1.27
LINC02417-201ENST00000542449 KDM6BO15054 1643 aa22.96■■□□□ 1.27
LINC02417-201ENST00000542449 ARHGAP35Q9NRY4 1499 aa22.94■■□□□ 1.26
LINC02417-201ENST00000542449 FMN1Q68DA7 1419 aa22.94■■□□□ 1.26
LINC02417-201ENST00000542449 MAP3K4Q9Y6R4 1608 aa22.9■■□□□ 1.26
LINC02417-201ENST00000542449 CDK11AQ9UQ88 783 aaPredicted RBP22.88■■□□□ 1.25
LINC02417-201ENST00000542449 PPRC1Q5VV67 1664 aaKnown RBP22.85■■□□□ 1.25
LINC02417-201ENST00000542449 MAGI3Q5TCQ9 1506 aa22.85■■□□□ 1.25
LINC02417-201ENST00000542449 LOC105371045A0A1W2PR82 267 aa22.84■■□□□ 1.25
LINC02417-201ENST00000542449 COL17A1Q9UMD9 1497 aaPredicted RBP22.83■■□□□ 1.25
LINC02417-201ENST00000542449 CLIP1P30622 1438 aa22.82■■□□□ 1.24
LINC02417-201ENST00000542449 CFAP43Q8NDM7 1665 aa22.81■■□□□ 1.24
LINC02417-201ENST00000542449 CDK13Q14004 1512 aaKnown RBP22.8■■□□□ 1.24
LINC02417-201ENST00000542449 HECW1Q76N89 1606 aa22.75■■□□□ 1.23
LINC02417-201ENST00000542449 PHLDB1Q86UU1 1377 aa22.75■■□□□ 1.23
LINC02417-201ENST00000542449 ABCA9Q8IUA7 1624 aa22.74■■□□□ 1.23
LINC02417-201ENST00000542449 RAPGEF3O95398 923 aa22.72■■□□□ 1.23
LINC02417-201ENST00000542449 CASKIN1Q8WXD9 1431 aa22.71■■□□□ 1.23
LINC02417-201ENST00000542449 NEO1Q92859 1461 aa22.67■■□□□ 1.22
LINC02417-201ENST00000542449 KDM4FA0A1W2PPD8 638 aa22.67■■□□□ 1.22
LINC02417-201ENST00000542449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.66■■□□□ 1.22
LINC02417-201ENST00000542449 ARAP3Q8WWN8 1544 aa22.66■■□□□ 1.22
LINC02417-201ENST00000542449 EFCAB2Q5VUJ9 269 aa22.65■■□□□ 1.22
LINC02417-201ENST00000542449 TROQ12816 1431 aaPredicted RBP22.64■■□□□ 1.21
LINC02417-201ENST00000542449 CEP162Q5TB80 1403 aa22.64■■□□□ 1.21
LINC02417-201ENST00000542449 FANCAO15360 1455 aa22.63■■□□□ 1.21
LINC02417-201ENST00000542449 AKNAQ7Z591 1439 aa22.63■■□□□ 1.21
LINC02417-201ENST00000542449 CCDC18Q5T9S5 1454 aa22.62■■□□□ 1.21
LINC02417-201ENST00000542449 PCF11O94913 1555 aaKnown RBP22.6■■□□□ 1.21
LINC02417-201ENST00000542449 PLCH2O75038 1416 aa22.6■■□□□ 1.21
LINC02417-201ENST00000542449 FYCO1Q9BQS8 1478 aa22.6■■□□□ 1.21
LINC02417-201ENST00000542449 DENND4BO75064 1496 aaPredicted RBP22.58■■□□□ 1.2
LINC02417-201ENST00000542449 TTC37Q6PGP7 1564 aa22.58■■□□□ 1.2
LINC02417-201ENST00000542449 ARID4BQ4LE39 1312 aaPredicted RBP22.56■■□□□ 1.2
LINC02417-201ENST00000542449 KIF14Q15058 1648 aa22.53■■□□□ 1.2
LINC02417-201ENST00000542449 MYT1LQ9UL68 1186 aa22.53■■□□□ 1.2
LINC02417-201ENST00000542449 SCAPERQ9BY12 1400 aa22.53■■□□□ 1.2
LINC02417-201ENST00000542449 ADGRL1O94910 1474 aa22.52■■□□□ 1.2
LINC02417-201ENST00000542449 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
LINC02417-201ENST00000542449 ZNF777Q9ULD5 760 aaPredicted RBP22.5■■□□□ 1.19
LINC02417-201ENST00000542449 CFAP74Q9C0B2 1584 aa22.5■■□□□ 1.19
LINC02417-201ENST00000542449 ARHGAP5Q13017 1502 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms