RNA–Protein interactions for RNA: ENST00000542277.5

PTPN6-216, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 664 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-216ENST00000542277 NPM1P06748 294 aaKnown RBP eCLIP31.39■■■□□ 2.62
PTPN6-216ENST00000542277 KIF27Q86VH2 1401 aa31.37■■■□□ 2.61
PTPN6-216ENST00000542277 FAM69CQ0P6D2 419 aa31.35■■■□□ 2.61
PTPN6-216ENST00000542277 KIAA0586Q9BVV6 1533 aa31.31■■■□□ 2.6
PTPN6-216ENST00000542277 RUSC2Q8N2Y8 1516 aa31.29■■■□□ 2.6
PTPN6-216ENST00000542277 CARMIL1Q5VZK9 1371 aa31.25■■■□□ 2.59
PTPN6-216ENST00000542277 TTBK1Q5TCY1 1321 aaPredicted RBP31.2■■■□□ 2.58
PTPN6-216ENST00000542277 ABCC10Q5T3U5 1492 aa31.19■■■□□ 2.58
PTPN6-216ENST00000542277 PTPRGP23470 1445 aa31.14■■■□□ 2.58
PTPN6-216ENST00000542277 KIF13AQ9H1H9 1805 aa31.12■■■□□ 2.57
PTPN6-216ENST00000542277 ADCY10Q96PN6 1610 aa31.1■■■□□ 2.57
PTPN6-216ENST00000542277 MAPKBP1O60336 1514 aa31.08■■■□□ 2.57
PTPN6-216ENST00000542277 CUL7Q14999 1698 aa31.08■■■□□ 2.57
PTPN6-216ENST00000542277 TNIKQ9UKE5 1360 aa31.03■■■□□ 2.56
PTPN6-216ENST00000542277 CARMIL2Q6F5E8 1435 aa31■■■□□ 2.55
PTPN6-216ENST00000542277 DIP2BQ9P265 1576 aa30.96■■■□□ 2.55
PTPN6-216ENST00000542277 ABCC2Q92887 1545 aa30.86■■■□□ 2.53
PTPN6-216ENST00000542277 IQGAP2Q13576 1575 aa30.85■■■□□ 2.53
PTPN6-216ENST00000542277 DISP1Q96F81 1524 aa30.85■■■□□ 2.53
PTPN6-216ENST00000542277 RAPGEF2Q9Y4G8 1499 aa30.85■■■□□ 2.53
PTPN6-216ENST00000542277 UACAQ9BZF9 1416 aa30.84■■■□□ 2.53
PTPN6-216ENST00000542277 ASXL2Q76L83 1435 aa30.83■■■□□ 2.53
PTPN6-216ENST00000542277 KDM4FA0A1W2PPD8 638 aa30.82■■■□□ 2.52
PTPN6-216ENST00000542277 UHRF1BP1LA0JNW5 1464 aa30.79■■■□□ 2.52
PTPN6-216ENST00000542277 PLB1Q6P1J6 1458 aa30.78■■■□□ 2.52
PTPN6-216ENST00000542277 TSPOAP1O95153 1857 aa30.74■■■□□ 2.51
PTPN6-216ENST00000542277 KDM6BO15054 1643 aa30.73■■■□□ 2.51
PTPN6-216ENST00000542277 UGGT2Q9NYU1 1516 aa30.72■■■□□ 2.51
PTPN6-216ENST00000542277 KDM5BQ9UGL1 1544 aa30.66■■■□□ 2.5
PTPN6-216ENST00000542277 GLI2P10070 1586 aa30.64■■■□□ 2.5
PTPN6-216ENST00000542277 EPRSP07814 1512 aaKnown RBP30.61■■■□□ 2.49
PTPN6-216ENST00000542277 COL17A1Q9UMD9 1497 aaPredicted RBP30.59■■■□□ 2.49
PTPN6-216ENST00000542277 KIAA0556O60303 1618 aa30.56■■■□□ 2.48
PTPN6-216ENST00000542277 KCNH8Q96L42 1107 aa30.55■■■□□ 2.48
PTPN6-216ENST00000542277 PRXQ9BXM0 1461 aa30.51■■■□□ 2.48
PTPN6-216ENST00000542277 PPRC1Q5VV67 1664 aaKnown RBP30.51■■■□□ 2.47
PTPN6-216ENST00000542277 P3H3Q8IVL6 736 aa30.48■■■□□ 2.47
PTPN6-216ENST00000542277 ZCCHC11Q5TAX3 1644 aaKnown RBP30.47■■■□□ 2.47
PTPN6-216ENST00000542277 GOLGA3Q08378 1498 aa30.46■■■□□ 2.47
PTPN6-216ENST00000542277 WDR7Q9Y4E6 1490 aa30.44■■■□□ 2.46
PTPN6-216ENST00000542277 CSRNP3Q8WYN3 585 aa30.41■■■□□ 2.46
PTPN6-216ENST00000542277 TEX14Q8IWB6 1497 aa30.41■■■□□ 2.46
PTPN6-216ENST00000542277 ARID3CA6NKF2 412 aa30.4■■■□□ 2.46
PTPN6-216ENST00000542277 MAP3K4Q9Y6R4 1608 aa30.4■■■□□ 2.46
PTPN6-216ENST00000542277 CD109Q6YHK3 1445 aa30.38■■■□□ 2.45
PTPN6-216ENST00000542277 ABCA8O94911 1581 aa30.36■■■□□ 2.45
PTPN6-216ENST00000542277 FAM9AQ8IZU1 332 aaPredicted RBP30.35■■■□□ 2.45
PTPN6-216ENST00000542277 ADGRL1O94910 1474 aa30.32■■■□□ 2.44
PTPN6-216ENST00000542277 CTTNBP2Q8WZ74 1663 aa30.3■■■□□ 2.44
PTPN6-216ENST00000542277 MAGI3Q5TCQ9 1506 aa30.27■■■□□ 2.44
PTPN6-216ENST00000542277 ATP10BO94823 1461 aa30.25■■■□□ 2.43
PTPN6-216ENST00000542277 RANGAP1P46060 587 aaPredicted RBP30.23■■■□□ 2.43
PTPN6-216ENST00000542277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.17■■■□□ 2.42
PTPN6-216ENST00000542277 HNRNPUL2Q1KMD3 747 aaKnown RBP30.17■■■□□ 2.42
PTPN6-216ENST00000542277 CFAP43Q8NDM7 1665 aa30.11■■■□□ 2.41
PTPN6-216ENST00000542277 RAPGEF3O95398 923 aa30.07■■■□□ 2.4
PTPN6-216ENST00000542277 ARAP3Q8WWN8 1544 aa30.04■■■□□ 2.4
PTPN6-216ENST00000542277 ILDR1Q86SU0 546 aaPredicted RBP30.02■■■□□ 2.4
PTPN6-216ENST00000542277 EEA1Q15075 1411 aa30.02■■■□□ 2.4
PTPN6-216ENST00000542277 PHLDB1Q86UU1 1377 aa30.02■■■□□ 2.4
PTPN6-216ENST00000542277 SAMD9Q5K651 1589 aa30.01■■■□□ 2.39
PTPN6-216ENST00000542277 FHOD3Q2V2M9 1422 aa29.99■■■□□ 2.39
PTPN6-216ENST00000542277 PLEKHD1A6NEE1 506 aa29.99■■■□□ 2.39
PTPN6-216ENST00000542277 NUP153P49790 1475 aaKnown RBP29.95■■■□□ 2.39
PTPN6-216ENST00000542277 RAPGEF6Q8TEU7 1601 aa29.93■■■□□ 2.38
PTPN6-216ENST00000542277 ABCA9Q8IUA7 1624 aa29.92■■■□□ 2.38
PTPN6-216ENST00000542277 EHMT2Q96KQ7 1210 aa29.91■■■□□ 2.38
PTPN6-216ENST00000542277 HECW2Q9P2P5 1572 aa29.88■■■□□ 2.37
PTPN6-216ENST00000542277 NEO1Q92859 1461 aa29.87■■■□□ 2.37
PTPN6-216ENST00000542277 ARID4BQ4LE39 1312 aaPredicted RBP29.83■■■□□ 2.37
PTPN6-216ENST00000542277 KIF21BO75037 1637 aa29.82■■■□□ 2.36
PTPN6-216ENST00000542277 UBTFP17480 764 aaKnown RBP29.82■■■□□ 2.36
PTPN6-216ENST00000542277 ATP1B4Q9UN42 357 aaPredicted RBP29.76■■■□□ 2.35
PTPN6-216ENST00000542277 AKNAQ7Z591 1439 aa29.76■■■□□ 2.35
PTPN6-216ENST00000542277 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
PTPN6-216ENST00000542277 DENND4BO75064 1496 aaPredicted RBP29.72■■■□□ 2.35
PTPN6-216ENST00000542277 PTPRMP28827 1452 aa29.72■■■□□ 2.35
PTPN6-216ENST00000542277 EFCAB5A4FU69 1503 aa29.68■■■□□ 2.34
PTPN6-216ENST00000542277 FRMPD1Q5SYB0 1578 aa29.68■■■□□ 2.34
PTPN6-216ENST00000542277 FANCAO15360 1455 aa29.68■■■□□ 2.34
PTPN6-216ENST00000542277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.67■■■□□ 2.34
PTPN6-216ENST00000542277 ADAMTSL3P82987 1691 aa29.64■■■□□ 2.34
PTPN6-216ENST00000542277 CDK13Q14004 1512 aaKnown RBP29.63■■■□□ 2.33
PTPN6-216ENST00000542277 PLCH2O75038 1416 aa29.59■■■□□ 2.33
PTPN6-216ENST00000542277 CDK11AQ9UQ88 783 aaPredicted RBP29.58■■■□□ 2.33
PTPN6-216ENST00000542277 SCAPERQ9BY12 1400 aa29.57■■■□□ 2.32
PTPN6-216ENST00000542277 EFCAB2Q5VUJ9 269 aa29.57■■■□□ 2.32
PTPN6-216ENST00000542277 PLPPR3Q6T4P5 718 aa29.57■■■□□ 2.32
PTPN6-216ENST00000542277 ARHGAP35Q9NRY4 1499 aa29.56■■■□□ 2.32
PTPN6-216ENST00000542277 YEATS2Q9ULM3 1422 aa29.56■■■□□ 2.32
PTPN6-216ENST00000542277 TTC37Q6PGP7 1564 aa29.56■■■□□ 2.32
PTPN6-216ENST00000542277 MLECQ14165 292 aa29.55■■■□□ 2.32
PTPN6-216ENST00000542277 FMN1Q68DA7 1419 aa29.54■■■□□ 2.32
PTPN6-216ENST00000542277 BCORL1Q5H9F3 1711 aa29.53■■■□□ 2.32
PTPN6-216ENST00000542277 RICTORQ6R327 1708 aa29.5■■■□□ 2.31
PTPN6-216ENST00000542277 MADDQ8WXG6 1647 aa29.49■■■□□ 2.31
PTPN6-216ENST00000542277 ARHGEF40Q8TER5 1519 aa29.47■■■□□ 2.31
PTPN6-216ENST00000542277 MAGI2Q86UL8 1455 aa29.47■■■□□ 2.31
PTPN6-216ENST00000542277 POGZQ7Z3K3 1410 aa29.46■■■□□ 2.31
PTPN6-216ENST00000542277 HSPA2P54652 639 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms