RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 KANK4Q5T7N3 995 aaPredicted RBP16.35■□□□□ 0.21
NECAP1-206ENST00000542095 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
NECAP1-206ENST00000542095 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
NECAP1-206ENST00000542095 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
NECAP1-206ENST00000542095 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
NECAP1-206ENST00000542095 RRBP1Q9P2E9 1410 aaKnown RBP16.3■□□□□ 0.2
NECAP1-206ENST00000542095 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
NECAP1-206ENST00000542095 WDR62O43379 1518 aa16.27■□□□□ 0.2
NECAP1-206ENST00000542095 FHOD3Q2V2M9 1422 aa16.26■□□□□ 0.19
NECAP1-206ENST00000542095 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
NECAP1-206ENST00000542095 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.193e-7■■■■■ 39.3
NECAP1-206ENST00000542095 SAMD9Q5K651 1589 aa16.24■□□□□ 0.19
NECAP1-206ENST00000542095 P3H3Q8IVL6 736 aa16.24■□□□□ 0.19
NECAP1-206ENST00000542095 LRRC9Q6ZRR7 1453 aa16.24■□□□□ 0.19
NECAP1-206ENST00000542095 IFT140Q96RY7 1462 aa16.23■□□□□ 0.19
NECAP1-206ENST00000542095 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
NECAP1-206ENST00000542095 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
NECAP1-206ENST00000542095 CCNB3Q8WWL7 1395 aa16.22■□□□□ 0.19
NECAP1-206ENST00000542095 FMN1Q68DA7 1419 aa16.22■□□□□ 0.19
NECAP1-206ENST00000542095 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
NECAP1-206ENST00000542095 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
NECAP1-206ENST00000542095 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
NECAP1-206ENST00000542095 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
NECAP1-206ENST00000542095 THOC2Q8NI27 1593 aaKnown RBP16.14■□□□□ 0.18
NECAP1-206ENST00000542095 IQGAP2Q13576 1575 aa16.14■□□□□ 0.17
NECAP1-206ENST00000542095 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.17
NECAP1-206ENST00000542095 LRRIQ1Q96JM4 1722 aa16.12■□□□□ 0.17
NECAP1-206ENST00000542095 EIF4G3O43432 1585 aaKnown RBP16.11■□□□□ 0.17
NECAP1-206ENST00000542095 PHLDB1Q86UU1 1377 aa16.11■□□□□ 0.17
NECAP1-206ENST00000542095 CLSPNQ9HAW4 1339 aa16.09■□□□□ 0.17
NECAP1-206ENST00000542095 DHX57Q6P158 1386 aaKnown RBP16.07■□□□□ 0.16
NECAP1-206ENST00000542095 UGGT2Q9NYU1 1516 aa16.05■□□□□ 0.16
NECAP1-206ENST00000542095 ITGAEP38570 1179 aa16.04■□□□□ 0.16
NECAP1-206ENST00000542095 HECW1Q76N89 1606 aa16.03■□□□□ 0.16
NECAP1-206ENST00000542095 MTUS2Q5JR59 1369 aa16.03■□□□□ 0.16
NECAP1-206ENST00000542095 CCDC18Q5T9S5 1454 aa16.02■□□□□ 0.16
NECAP1-206ENST00000542095 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.02■□□□□ 0.15
NECAP1-206ENST00000542095 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.15
NECAP1-206ENST00000542095 EHBP1L1Q8N3D4 1523 aa16.01■□□□□ 0.15
NECAP1-206ENST00000542095 GRIN2AQ12879 1464 aa16.01■□□□□ 0.15
NECAP1-206ENST00000542095 MAGI1Q96QZ7 1491 aaPredicted RBP16.01■□□□□ 0.15
NECAP1-206ENST00000542095 KIAA0586Q9BVV6 1533 aa16.01■□□□□ 0.15
NECAP1-206ENST00000542095 FAM50AQ14320 339 aaKnown RBP16■□□□□ 0.15
NECAP1-206ENST00000542095 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
NECAP1-206ENST00000542095 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
NECAP1-206ENST00000542095 SETD5Q9C0A6 1442 aa15.98■□□□□ 0.15
NECAP1-206ENST00000542095 ZNF316A6NFI3 1004 aaPredicted RBP15.97■□□□□ 0.15
NECAP1-206ENST00000542095 KIAA0556O60303 1618 aa15.97■□□□□ 0.15
NECAP1-206ENST00000542095 NCOA2Q15596 1464 aa15.96■□□□□ 0.15
NECAP1-206ENST00000542095 SYNJ2O15056 1496 aa15.95■□□□□ 0.14
NECAP1-206ENST00000542095 DIEXFQ68CQ4 756 aaKnown RBP15.95■□□□□ 0.14
NECAP1-206ENST00000542095 EPRSP07814 1512 aaKnown RBP15.93■□□□□ 0.14
NECAP1-206ENST00000542095 DISP1Q96F81 1524 aa15.93■□□□□ 0.14
NECAP1-206ENST00000542095 MYOM3Q5VTT5 1437 aa15.93■□□□□ 0.14
NECAP1-206ENST00000542095 ARHGEF11O15085 1522 aa15.92■□□□□ 0.14
NECAP1-206ENST00000542095 MAGI3Q5TCQ9 1506 aa15.92■□□□□ 0.14
NECAP1-206ENST00000542095 CEP170Q5SW79 1584 aa15.91■□□□□ 0.14
NECAP1-206ENST00000542095 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
NECAP1-206ENST00000542095 PTPN23Q9H3S7 1636 aa15.89■□□□□ 0.13
NECAP1-206ENST00000542095 CDK13Q14004 1512 aaKnown RBP15.88■□□□□ 0.13
NECAP1-206ENST00000542095 RAPGEF6Q8TEU7 1601 aa15.88■□□□□ 0.13
NECAP1-206ENST00000542095 MAPKBP1O60336 1514 aa15.87■□□□□ 0.13
NECAP1-206ENST00000542095 NUP160Q12769 1436 aa15.86■□□□□ 0.13
NECAP1-206ENST00000542095 TCOF1Q13428 1488 aaKnown RBP15.83■□□□□ 0.12
NECAP1-206ENST00000542095 FBLN2P98095 1184 aa15.83■□□□□ 0.12
NECAP1-206ENST00000542095 NUP153P49790 1475 aaKnown RBP15.81■□□□□ 0.12
NECAP1-206ENST00000542095 HFM1A2PYH4 1435 aa15.81■□□□□ 0.12
NECAP1-206ENST00000542095 CARMIL2Q6F5E8 1435 aa15.81■□□□□ 0.12
NECAP1-206ENST00000542095 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
NECAP1-206ENST00000542095 MIA2Q96PC5 1412 aa15.8■□□□□ 0.12
NECAP1-206ENST00000542095 ARID3CA6NKF2 412 aa15.77■□□□□ 0.11
NECAP1-206ENST00000542095 JPH4Q96JJ6 628 aa15.77■□□□□ 0.11
NECAP1-206ENST00000542095 GCC2Q8IWJ2 1684 aa15.76■□□□□ 0.11
NECAP1-206ENST00000542095 CDK11AQ9UQ88 783 aaPredicted RBP15.76■□□□□ 0.11
NECAP1-206ENST00000542095 NAIPQ13075 1403 aa15.75■□□□□ 0.11
NECAP1-206ENST00000542095 PLB1Q6P1J6 1458 aa15.73■□□□□ 0.11
NECAP1-206ENST00000542095 UACAQ9BZF9 1416 aa15.73■□□□□ 0.11
NECAP1-206ENST00000542095 CHD1O14646 1710 aa15.73■□□□□ 0.11
NECAP1-206ENST00000542095 AKNAQ7Z591 1439 aa15.72■□□□□ 0.11
NECAP1-206ENST00000542095 ADCY10Q96PN6 1610 aa15.72■□□□□ 0.11
NECAP1-206ENST00000542095 ITSN2Q9NZM3 1697 aa15.71■□□□□ 0.11
NECAP1-206ENST00000542095 TROQ12816 1431 aaPredicted RBP15.71■□□□□ 0.1
NECAP1-206ENST00000542095 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
NECAP1-206ENST00000542095 ABCA8O94911 1581 aa15.69■□□□□ 0.1
NECAP1-206ENST00000542095 DNMT1P26358 1616 aaKnown RBP15.68■□□□□ 0.1
NECAP1-206ENST00000542095 SIN3AQ96ST3 1273 aa15.68■□□□□ 0.1
NECAP1-206ENST00000542095 NEUROD1Q13562 356 aa15.67■□□□□ 0.1
NECAP1-206ENST00000542095 PRG4Q92954 1404 aaPredicted RBP15.66■□□□□ 0.1
NECAP1-206ENST00000542095 DAPK1P53355 1430 aa15.64■□□□□ 0.09
NECAP1-206ENST00000542095 KIF14Q15058 1648 aa15.64■□□□□ 0.09
NECAP1-206ENST00000542095 RRP7BPQ9NSQ0 103 aa15.64■□□□□ 0.09
NECAP1-206ENST00000542095 CHIC2Q9UKJ5 165 aa15.64■□□□□ 0.09
NECAP1-206ENST00000542095 ROCK1Q13464 1354 aa15.62■□□□□ 0.09
NECAP1-206ENST00000542095 SHROOM2Q13796 1616 aa15.61■□□□□ 0.09
NECAP1-206ENST00000542095 MIER1Q8N108 512 aa15.61■□□□□ 0.09
NECAP1-206ENST00000542095 KDM6BO15054 1643 aa15.61■□□□□ 0.09
NECAP1-206ENST00000542095 ABCC5O15440 1437 aa15.61■□□□□ 0.09
NECAP1-206ENST00000542095 ACIN1Q9UKV3 1341 aaKnown RBP15.6■□□□□ 0.09
NECAP1-206ENST00000542095 GPATCH8Q9UKJ3 1502 aaKnown RBP15.6■□□□□ 0.09
NECAP1-206ENST00000542095 ATP10BO94823 1461 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms