RNA–Protein interactions for RNA: ENST00000541372.1

SLC3A2-216, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 269 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-216ENST00000541372 RAPGEF2Q9Y4G8 1499 aa25.79■■□□□ 1.72
SLC3A2-216ENST00000541372 ARAP1Q96P48 1450 aa25.77■■□□□ 1.72
SLC3A2-216ENST00000541372 KIAA0586Q9BVV6 1533 aa25.77■■□□□ 1.72
SLC3A2-216ENST00000541372 PRG4Q92954 1404 aaPredicted RBP25.71■■□□□ 1.71
SLC3A2-216ENST00000541372 FAM9AQ8IZU1 332 aaPredicted RBP25.71■■□□□ 1.71
SLC3A2-216ENST00000541372 PRXQ9BXM0 1461 aa25.71■■□□□ 1.71
SLC3A2-216ENST00000541372 EEA1Q15075 1411 aa25.7■■□□□ 1.7
SLC3A2-216ENST00000541372 SHROOM2Q13796 1616 aa25.67■■□□□ 1.7
SLC3A2-216ENST00000541372 ERCC6L2Q5T890 1561 aa25.66■■□□□ 1.7
SLC3A2-216ENST00000541372 IQGAP2Q13576 1575 aa25.51■■□□□ 1.67
SLC3A2-216ENST00000541372 CARMIL2Q6F5E8 1435 aa25.5■■□□□ 1.67
SLC3A2-216ENST00000541372 PTPRGP23470 1445 aa25.46■■□□□ 1.67
SLC3A2-216ENST00000541372 TNIKQ9UKE5 1360 aa25.44■■□□□ 1.66
SLC3A2-216ENST00000541372 UGGT2Q9NYU1 1516 aa25.43■■□□□ 1.66
SLC3A2-216ENST00000541372 TTBK1Q5TCY1 1321 aaPredicted RBP25.42■■□□□ 1.66
SLC3A2-216ENST00000541372 DISP1Q96F81 1524 aa25.42■■□□□ 1.66
SLC3A2-216ENST00000541372 EHMT2Q96KQ7 1210 aa25.37■■□□□ 1.65
SLC3A2-216ENST00000541372 UBTFP17480 764 aaKnown RBP25.35■■□□□ 1.65
SLC3A2-216ENST00000541372 TRHP20396 242 aaPredicted RBP25.35■■□□□ 1.65
SLC3A2-216ENST00000541372 NPM1P06748 294 aaKnown RBP eCLIP25.34■■□□□ 1.65
SLC3A2-216ENST00000541372 KIF21BO75037 1637 aa25.32■■□□□ 1.64
SLC3A2-216ENST00000541372 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
SLC3A2-216ENST00000541372 RANGAP1P46060 587 aaPredicted RBP25.29■■□□□ 1.64
SLC3A2-216ENST00000541372 P3H3Q8IVL6 736 aa25.29■■□□□ 1.64
SLC3A2-216ENST00000541372 CTTNBP2Q8WZ74 1663 aa25.29■■□□□ 1.64
SLC3A2-216ENST00000541372 KIAA0556O60303 1618 aa25.25■■□□□ 1.63
SLC3A2-216ENST00000541372 UACAQ9BZF9 1416 aa25.24■■□□□ 1.63
SLC3A2-216ENST00000541372 UHRF1BP1LA0JNW5 1464 aa25.19■■□□□ 1.62
SLC3A2-216ENST00000541372 ADCY10Q96PN6 1610 aa25.19■■□□□ 1.62
SLC3A2-216ENST00000541372 ABCC2Q92887 1545 aa25.13■■□□□ 1.61
SLC3A2-216ENST00000541372 PLB1Q6P1J6 1458 aa25.12■■□□□ 1.61
SLC3A2-216ENST00000541372 SAMD9Q5K651 1589 aa25.09■■□□□ 1.61
SLC3A2-216ENST00000541372 FAM69CQ0P6D2 419 aa25.07■■□□□ 1.6
SLC3A2-216ENST00000541372 MAPKBP1O60336 1514 aa25.06■■□□□ 1.6
SLC3A2-216ENST00000541372 KDM5BQ9UGL1 1544 aa25.06■■□□□ 1.6
SLC3A2-216ENST00000541372 FHOD3Q2V2M9 1422 aa25.05■■□□□ 1.6
SLC3A2-216ENST00000541372 ABCA8O94911 1581 aa25.03■■□□□ 1.6
SLC3A2-216ENST00000541372 ABCC10Q5T3U5 1492 aa25.02■■□□□ 1.6
SLC3A2-216ENST00000541372 EFCAB5A4FU69 1503 aa25.01■■□□□ 1.59
SLC3A2-216ENST00000541372 ASXL2Q76L83 1435 aa25■■□□□ 1.59
SLC3A2-216ENST00000541372 ARID3CA6NKF2 412 aa24.98■■□□□ 1.59
SLC3A2-216ENST00000541372 ARHGAP35Q9NRY4 1499 aa24.96■■□□□ 1.59
SLC3A2-216ENST00000541372 LOC105371045A0A1W2PR82 267 aa24.96■■□□□ 1.59
SLC3A2-216ENST00000541372 ATP10BO94823 1461 aa24.93■■□□□ 1.58
SLC3A2-216ENST00000541372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.89■■□□□ 1.58
SLC3A2-216ENST00000541372 HNRNPUL2Q1KMD3 747 aaKnown RBP24.89■■□□□ 1.58
SLC3A2-216ENST00000541372 KCNH8Q96L42 1107 aa24.89■■□□□ 1.58
SLC3A2-216ENST00000541372 ZCCHC11Q5TAX3 1644 aaKnown RBP24.88■■□□□ 1.57
SLC3A2-216ENST00000541372 FMN1Q68DA7 1419 aa24.87■■□□□ 1.57
SLC3A2-216ENST00000541372 DIP2BQ9P265 1576 aa24.85■■□□□ 1.57
SLC3A2-216ENST00000541372 NUP153P49790 1475 aaKnown RBP24.85■■□□□ 1.57
SLC3A2-216ENST00000541372 RAPGEF6Q8TEU7 1601 aa24.85■■□□□ 1.57
SLC3A2-216ENST00000541372 CLIP1P30622 1438 aa24.85■■□□□ 1.57
SLC3A2-216ENST00000541372 ATP1B4Q9UN42 357 aaPredicted RBP24.84■■□□□ 1.57
SLC3A2-216ENST00000541372 WDR7Q9Y4E6 1490 aa24.83■■□□□ 1.57
SLC3A2-216ENST00000541372 EPRSP07814 1512 aaKnown RBP24.83■■□□□ 1.57
SLC3A2-216ENST00000541372 KIF13AQ9H1H9 1805 aa24.81■■□□□ 1.56
SLC3A2-216ENST00000541372 PLEKHD1A6NEE1 506 aa24.8■■□□□ 1.56
SLC3A2-216ENST00000541372 GLI2P10070 1586 aa24.79■■□□□ 1.56
SLC3A2-216ENST00000541372 CEP162Q5TB80 1403 aa24.72■■□□□ 1.55
SLC3A2-216ENST00000541372 CDK11AQ9UQ88 783 aaPredicted RBP24.69■■□□□ 1.54
SLC3A2-216ENST00000541372 CD109Q6YHK3 1445 aa24.69■■□□□ 1.54
SLC3A2-216ENST00000541372 CASKIN1Q8WXD9 1431 aa24.69■■□□□ 1.54
SLC3A2-216ENST00000541372 CDK13Q14004 1512 aaKnown RBP24.64■■□□□ 1.53
SLC3A2-216ENST00000541372 HECW1Q76N89 1606 aa24.61■■□□□ 1.53
SLC3A2-216ENST00000541372 MAP3K4Q9Y6R4 1608 aa24.6■■□□□ 1.53
SLC3A2-216ENST00000541372 TSPOAP1O95153 1857 aa24.58■■□□□ 1.53
SLC3A2-216ENST00000541372 MAGI3Q5TCQ9 1506 aa24.58■■□□□ 1.53
SLC3A2-216ENST00000541372 TEX14Q8IWB6 1497 aa24.58■■□□□ 1.52
SLC3A2-216ENST00000541372 FYCO1Q9BQS8 1478 aa24.56■■□□□ 1.52
SLC3A2-216ENST00000541372 PPRC1Q5VV67 1664 aaKnown RBP24.53■■□□□ 1.52
SLC3A2-216ENST00000541372 PCF11O94913 1555 aaKnown RBP24.52■■□□□ 1.52
SLC3A2-216ENST00000541372 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
SLC3A2-216ENST00000541372 TROQ12816 1431 aaPredicted RBP24.51■■□□□ 1.51
SLC3A2-216ENST00000541372 COL17A1Q9UMD9 1497 aaPredicted RBP24.51■■□□□ 1.51
SLC3A2-216ENST00000541372 ABCA9Q8IUA7 1624 aa24.5■■□□□ 1.51
SLC3A2-216ENST00000541372 CFAP43Q8NDM7 1665 aa24.5■■□□□ 1.51
SLC3A2-216ENST00000541372 PHLDB1Q86UU1 1377 aa24.47■■□□□ 1.51
SLC3A2-216ENST00000541372 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.46■■□□□ 1.513e-6■■□□□ 13.1
SLC3A2-216ENST00000541372 KDM6BO15054 1643 aa24.45■■□□□ 1.5
SLC3A2-216ENST00000541372 PLCH2O75038 1416 aa24.42■■□□□ 1.5
SLC3A2-216ENST00000541372 VPS8Q8N3P4 1428 aa24.42■■□□□ 1.5
SLC3A2-216ENST00000541372 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
SLC3A2-216ENST00000541372 NEO1Q92859 1461 aa24.39■■□□□ 1.5
SLC3A2-216ENST00000541372 EFCAB2Q5VUJ9 269 aa24.39■■□□□ 1.49
SLC3A2-216ENST00000541372 ARAP3Q8WWN8 1544 aa24.38■■□□□ 1.49
SLC3A2-216ENST00000541372 RAPGEF3O95398 923 aa24.36■■□□□ 1.49
SLC3A2-216ENST00000541372 AKNAQ7Z591 1439 aa24.35■■□□□ 1.49
SLC3A2-216ENST00000541372 TTC37Q6PGP7 1564 aa24.35■■□□□ 1.49
SLC3A2-216ENST00000541372 MTUS2Q5JR59 1369 aa24.35■■□□□ 1.49
SLC3A2-216ENST00000541372 FANCAO15360 1455 aa24.34■■□□□ 1.49
SLC3A2-216ENST00000541372 KIF14Q15058 1648 aa24.32■■□□□ 1.48
SLC3A2-216ENST00000541372 KANK4Q5T7N3 995 aaPredicted RBP24.25■■□□□ 1.47
SLC3A2-216ENST00000541372 SCAPERQ9BY12 1400 aa24.25■■□□□ 1.47
SLC3A2-216ENST00000541372 DENND4BO75064 1496 aaPredicted RBP24.25■■□□□ 1.47
SLC3A2-216ENST00000541372 APLP2Q06481 763 aa24.24■■□□□ 1.47
SLC3A2-216ENST00000541372 CCNB3Q8WWL7 1395 aa24.23■■□□□ 1.47
SLC3A2-216ENST00000541372 GPATCH8Q9UKJ3 1502 aaKnown RBP24.22■■□□□ 1.47
SLC3A2-216ENST00000541372 CFDP1Q9UEE9 299 aaPredicted RBP24.22■■□□□ 1.47
SLC3A2-216ENST00000541372 ARHGAP5Q13017 1502 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms