RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 IGF1RP08069 1367 aa23.1■■□□□ 1.29
PRPF19-206ENST00000541371 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.28
PRPF19-206ENST00000541371 NPM1P06748 294 aaKnown RBP eCLIP23.02■■□□□ 1.28
PRPF19-206ENST00000541371 KIAA0586Q9BVV6 1533 aa23.01■■□□□ 1.27
PRPF19-206ENST00000541371 CUL7Q14999 1698 aa23■■□□□ 1.27
PRPF19-206ENST00000541371 CARMIL1Q5VZK9 1371 aa22.95■■□□□ 1.26
PRPF19-206ENST00000541371 FAM69CQ0P6D2 419 aa22.92■■□□□ 1.26
PRPF19-206ENST00000541371 KIF13AQ9H1H9 1805 aa22.89■■□□□ 1.26
PRPF19-206ENST00000541371 ABCC10Q5T3U5 1492 aa22.87■■□□□ 1.25
PRPF19-206ENST00000541371 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
PRPF19-206ENST00000541371 MAPKBP1O60336 1514 aa22.86■■□□□ 1.25
PRPF19-206ENST00000541371 TTBK1Q5TCY1 1321 aaPredicted RBP22.84■■□□□ 1.25
PRPF19-206ENST00000541371 PTPRGP23470 1445 aa22.84■■□□□ 1.25
PRPF19-206ENST00000541371 CARMIL2Q6F5E8 1435 aa22.82■■□□□ 1.24
PRPF19-206ENST00000541371 TNIKQ9UKE5 1360 aa22.78■■□□□ 1.24
PRPF19-206ENST00000541371 DIP2BQ9P265 1576 aa22.77■■□□□ 1.24
PRPF19-206ENST00000541371 IQGAP2Q13576 1575 aa22.76■■□□□ 1.23
PRPF19-206ENST00000541371 RAPGEF2Q9Y4G8 1499 aa22.72■■□□□ 1.23
PRPF19-206ENST00000541371 ABCC2Q92887 1545 aa22.68■■□□□ 1.22
PRPF19-206ENST00000541371 DISP1Q96F81 1524 aa22.65■■□□□ 1.22
PRPF19-206ENST00000541371 UACAQ9BZF9 1416 aa22.65■■□□□ 1.22
PRPF19-206ENST00000541371 UHRF1BP1LA0JNW5 1464 aa22.63■■□□□ 1.21
PRPF19-206ENST00000541371 ASXL2Q76L83 1435 aa22.63■■□□□ 1.21
PRPF19-206ENST00000541371 TSPOAP1O95153 1857 aa22.62■■□□□ 1.21
PRPF19-206ENST00000541371 PLB1Q6P1J6 1458 aa22.62■■□□□ 1.21
PRPF19-206ENST00000541371 UGGT2Q9NYU1 1516 aa22.62■■□□□ 1.21
PRPF19-206ENST00000541371 KDM6BO15054 1643 aa22.6■■□□□ 1.21
PRPF19-206ENST00000541371 KIAA0556O60303 1618 aa22.54■■□□□ 1.2
PRPF19-206ENST00000541371 GLI2P10070 1586 aa22.53■■□□□ 1.2
PRPF19-206ENST00000541371 KDM5BQ9UGL1 1544 aa22.52■■□□□ 1.2
PRPF19-206ENST00000541371 GOLGA3Q08378 1498 aa22.47■■□□□ 1.19
PRPF19-206ENST00000541371 EPRSP07814 1512 aaKnown RBP22.47■■□□□ 1.19
PRPF19-206ENST00000541371 PRXQ9BXM0 1461 aa22.46■■□□□ 1.19
PRPF19-206ENST00000541371 CTTNBP2Q8WZ74 1663 aa22.46■■□□□ 1.19
PRPF19-206ENST00000541371 ZCCHC11Q5TAX3 1644 aaKnown RBP22.45■■□□□ 1.18
PRPF19-206ENST00000541371 KDM4FA0A1W2PPD8 638 aa22.44■■□□□ 1.18
PRPF19-206ENST00000541371 ILDR1Q86SU0 546 aaPredicted RBP22.44■■□□□ 1.18
PRPF19-206ENST00000541371 PPRC1Q5VV67 1664 aaKnown RBP22.42■■□□□ 1.18
PRPF19-206ENST00000541371 FAM9AQ8IZU1 332 aaPredicted RBP22.39■■□□□ 1.17
PRPF19-206ENST00000541371 TEX14Q8IWB6 1497 aa22.39■■□□□ 1.17
PRPF19-206ENST00000541371 WDR7Q9Y4E6 1490 aa22.39■■□□□ 1.17
PRPF19-206ENST00000541371 MAP3K4Q9Y6R4 1608 aa22.38■■□□□ 1.17
PRPF19-206ENST00000541371 ABCA8O94911 1581 aa22.34■■□□□ 1.17
PRPF19-206ENST00000541371 CSRNP3Q8WYN3 585 aa22.34■■□□□ 1.17
PRPF19-206ENST00000541371 KCNH8Q96L42 1107 aa22.34■■□□□ 1.17
PRPF19-206ENST00000541371 COL17A1Q9UMD9 1497 aaPredicted RBP22.34■■□□□ 1.17
PRPF19-206ENST00000541371 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
PRPF19-206ENST00000541371 CD109Q6YHK3 1445 aa22.29■■□□□ 1.16
PRPF19-206ENST00000541371 ARID3CA6NKF2 412 aa22.26■■□□□ 1.15
PRPF19-206ENST00000541371 MAGI3Q5TCQ9 1506 aa22.24■■□□□ 1.15
PRPF19-206ENST00000541371 ADGRL1O94910 1474 aa22.23■■□□□ 1.15
PRPF19-206ENST00000541371 CFAP43Q8NDM7 1665 aa22.22■■□□□ 1.15
PRPF19-206ENST00000541371 EEA1Q15075 1411 aa22.2■■□□□ 1.14
PRPF19-206ENST00000541371 ATP10BO94823 1461 aa22.19■■□□□ 1.14
PRPF19-206ENST00000541371 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
PRPF19-206ENST00000541371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
PRPF19-206ENST00000541371 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
PRPF19-206ENST00000541371 SAMD9Q5K651 1589 aa22.16■■□□□ 1.14
PRPF19-206ENST00000541371 RAPGEF6Q8TEU7 1601 aa22.1■■□□□ 1.13
PRPF19-206ENST00000541371 FHOD3Q2V2M9 1422 aa22.06■■□□□ 1.12
PRPF19-206ENST00000541371 ARAP3Q8WWN8 1544 aa22.06■■□□□ 1.12
PRPF19-206ENST00000541371 PHLDB1Q86UU1 1377 aa22.05■■□□□ 1.12
PRPF19-206ENST00000541371 ABCA9Q8IUA7 1624 aa22.05■■□□□ 1.12
PRPF19-206ENST00000541371 NUP153P49790 1475 aaKnown RBP22.03■■□□□ 1.12
PRPF19-206ENST00000541371 PLEKHD1A6NEE1 506 aa22.01■■□□□ 1.11
PRPF19-206ENST00000541371 NEO1Q92859 1461 aa21.98■■□□□ 1.11
PRPF19-206ENST00000541371 RAPGEF3O95398 923 aa21.98■■□□□ 1.11
PRPF19-206ENST00000541371 KIF21BO75037 1637 aa21.98■■□□□ 1.11
PRPF19-206ENST00000541371 EFCAB5A4FU69 1503 aa21.96■■□□□ 1.11
PRPF19-206ENST00000541371 UBTFP17480 764 aaKnown RBP21.94■■□□□ 1.1
PRPF19-206ENST00000541371 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
PRPF19-206ENST00000541371 HECW2Q9P2P5 1572 aa21.91■■□□□ 1.1
PRPF19-206ENST00000541371 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
PRPF19-206ENST00000541371 ARID4BQ4LE39 1312 aaPredicted RBP21.86■■□□□ 1.09
PRPF19-206ENST00000541371 ATP1B4Q9UN42 357 aaPredicted RBP21.86■■□□□ 1.09
PRPF19-206ENST00000541371 DENND4BO75064 1496 aaPredicted RBP21.84■■□□□ 1.09
PRPF19-206ENST00000541371 AKNAQ7Z591 1439 aa21.84■■□□□ 1.09
PRPF19-206ENST00000541371 FANCAO15360 1455 aa21.83■■□□□ 1.09
PRPF19-206ENST00000541371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.83■■□□□ 1.093e-10■■■■□ 20.3
PRPF19-206ENST00000541371 FRMPD1Q5SYB0 1578 aa21.82■■□□□ 1.08
PRPF19-206ENST00000541371 CDK13Q14004 1512 aaKnown RBP21.81■■□□□ 1.08
PRPF19-206ENST00000541371 FMN1Q68DA7 1419 aa21.8■■□□□ 1.08
PRPF19-206ENST00000541371 CFAP74Q9C0B2 1584 aa21.79■■□□□ 1.08
PRPF19-206ENST00000541371 PTPRMP28827 1452 aa21.78■■□□□ 1.08
PRPF19-206ENST00000541371 ADAMTSL3P82987 1691 aa21.78■■□□□ 1.08
PRPF19-206ENST00000541371 TTC37Q6PGP7 1564 aa21.78■■□□□ 1.08
PRPF19-206ENST00000541371 CDK11AQ9UQ88 783 aaPredicted RBP21.77■■□□□ 1.08
PRPF19-206ENST00000541371 ARHGAP35Q9NRY4 1499 aa21.77■■□□□ 1.07
PRPF19-206ENST00000541371 HECW1Q76N89 1606 aa21.74■■□□□ 1.07
PRPF19-206ENST00000541371 RICTORQ6R327 1708 aa21.74■■□□□ 1.07
PRPF19-206ENST00000541371 ARHGEF40Q8TER5 1519 aa21.74■■□□□ 1.07
PRPF19-206ENST00000541371 PLCH2O75038 1416 aa21.73■■□□□ 1.07
PRPF19-206ENST00000541371 BCORL1Q5H9F3 1711 aa21.73■■□□□ 1.07
PRPF19-206ENST00000541371 EFCAB2Q5VUJ9 269 aa21.7■■□□□ 1.06
PRPF19-206ENST00000541371 SCAPERQ9BY12 1400 aa21.7■■□□□ 1.06
PRPF19-206ENST00000541371 ZMYM4Q5VZL5 1548 aa21.69■■□□□ 1.06
PRPF19-206ENST00000541371 MADDQ8WXG6 1647 aa21.69■■□□□ 1.06
PRPF19-206ENST00000541371 POGZQ7Z3K3 1410 aa21.68■■□□□ 1.06
PRPF19-206ENST00000541371 MAGI2Q86UL8 1455 aa21.68■■□□□ 1.06
PRPF19-206ENST00000541371 ZFYVE16Q7Z3T8 1539 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms