RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 CTTNBP2Q8WZ74 1663 aa23.69■■□□□ 1.38
CLPTM1-202ENST00000541297 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
CLPTM1-202ENST00000541297 ADAMTS12P58397 1594 aa23.65■■□□□ 1.38
CLPTM1-202ENST00000541297 FHAD1B1AJZ9 1412 aa23.62■■□□□ 1.37
CLPTM1-202ENST00000541297 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
CLPTM1-202ENST00000541297 P3H3Q8IVL6 736 aa23.57■■□□□ 1.36
CLPTM1-202ENST00000541297 APLP2Q06481 763 aa23.53■■□□□ 1.36
CLPTM1-202ENST00000541297 FHOD3Q2V2M9 1422 aa23.47■■□□□ 1.35
CLPTM1-202ENST00000541297 MAGI1Q96QZ7 1491 aaPredicted RBP23.46■■□□□ 1.35
CLPTM1-202ENST00000541297 EFCAB5A4FU69 1503 aa23.46■■□□□ 1.35
CLPTM1-202ENST00000541297 FBLN2P98095 1184 aa23.45■■□□□ 1.34
CLPTM1-202ENST00000541297 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
CLPTM1-202ENST00000541297 ZEB1P37275 1124 aaPredicted RBP23.43■■□□□ 1.34
CLPTM1-202ENST00000541297 CHMP7Q8WUX9 453 aaPredicted RBP23.42■■□□□ 1.34
CLPTM1-202ENST00000541297 IQGAP2Q13576 1575 aa23.42■■□□□ 1.34
CLPTM1-202ENST00000541297 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
CLPTM1-202ENST00000541297 SAMD9Q5K651 1589 aa23.39■■□□□ 1.34
CLPTM1-202ENST00000541297 PCF11O94913 1555 aaKnown RBP23.36■■□□□ 1.33
CLPTM1-202ENST00000541297 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
CLPTM1-202ENST00000541297 ATP1B4Q9UN42 357 aaPredicted RBP23.35■■□□□ 1.33
CLPTM1-202ENST00000541297 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
CLPTM1-202ENST00000541297 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
CLPTM1-202ENST00000541297 FMN1Q68DA7 1419 aa23.27■■□□□ 1.32
CLPTM1-202ENST00000541297 TIAM1Q13009 1591 aa23.26■■□□□ 1.31
CLPTM1-202ENST00000541297 UGGT2Q9NYU1 1516 aa23.24■■□□□ 1.31
CLPTM1-202ENST00000541297 FYCO1Q9BQS8 1478 aa23.24■■□□□ 1.31
CLPTM1-202ENST00000541297 CASKIN1Q8WXD9 1431 aa23.23■■□□□ 1.31
CLPTM1-202ENST00000541297 CHD1O14646 1710 aa23.22■■□□□ 1.31
CLPTM1-202ENST00000541297 NUP160Q12769 1436 aa23.21■■□□□ 1.31
CLPTM1-202ENST00000541297 CFAP43Q8NDM7 1665 aa23.2■■□□□ 1.3
CLPTM1-202ENST00000541297 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
CLPTM1-202ENST00000541297 DISP1Q96F81 1524 aa23.18■■□□□ 1.3
CLPTM1-202ENST00000541297 KIAA0556O60303 1618 aa23.18■■□□□ 1.3
CLPTM1-202ENST00000541297 LRRIQ1Q96JM4 1722 aa23.17■■□□□ 1.3
CLPTM1-202ENST00000541297 LRRC9Q6ZRR7 1453 aa23.15■■□□□ 1.3
CLPTM1-202ENST00000541297 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.29
CLPTM1-202ENST00000541297 PELP1Q8IZL8 1130 aaKnown RBP23.12■■□□□ 1.29
CLPTM1-202ENST00000541297 JPH4Q96JJ6 628 aa23.12■■□□□ 1.29
CLPTM1-202ENST00000541297 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.28
CLPTM1-202ENST00000541297 ARID3CA6NKF2 412 aa23.05■■□□□ 1.28
CLPTM1-202ENST00000541297 HECW1Q76N89 1606 aa23.04■■□□□ 1.28
CLPTM1-202ENST00000541297 CARMIL2Q6F5E8 1435 aa23.02■■□□□ 1.28
CLPTM1-202ENST00000541297 MTUS2Q5JR59 1369 aa22.99■■□□□ 1.27
CLPTM1-202ENST00000541297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.99■■□□□ 1.27
CLPTM1-202ENST00000541297 RRBP1Q9P2E9 1410 aaKnown RBP22.99■■□□□ 1.27
CLPTM1-202ENST00000541297 PHLDB1Q86UU1 1377 aa22.99■■□□□ 1.27
CLPTM1-202ENST00000541297 CDK13Q14004 1512 aaKnown RBP22.98■■□□□ 1.27
CLPTM1-202ENST00000541297 EPRSP07814 1512 aaKnown RBP22.98■■□□□ 1.27
CLPTM1-202ENST00000541297 CCDC18Q5T9S5 1454 aa22.97■■□□□ 1.27
CLPTM1-202ENST00000541297 RAPGEF6Q8TEU7 1601 aa22.97■■□□□ 1.27
CLPTM1-202ENST00000541297 PRG4Q92954 1404 aaPredicted RBP22.96■■□□□ 1.27
CLPTM1-202ENST00000541297 CCNB3Q8WWL7 1395 aa22.95■■□□□ 1.26
CLPTM1-202ENST00000541297 PLB1Q6P1J6 1458 aa22.94■■□□□ 1.26
CLPTM1-202ENST00000541297 MAGI3Q5TCQ9 1506 aa22.94■■□□□ 1.26
CLPTM1-202ENST00000541297 NUP153P49790 1475 aaKnown RBP22.92■■□□□ 1.26
CLPTM1-202ENST00000541297 EHBP1L1Q8N3D4 1523 aa22.9■■□□□ 1.26
CLPTM1-202ENST00000541297 ITGAEP38570 1179 aa22.89■■□□□ 1.26
CLPTM1-202ENST00000541297 SHROOM2Q13796 1616 aa22.89■■□□□ 1.25
CLPTM1-202ENST00000541297 SUPT6HQ7KZ85 1726 aaKnown RBP22.88■■□□□ 1.25
CLPTM1-202ENST00000541297 CCER1Q8TC90 406 aaPredicted RBP22.87■■□□□ 1.25
CLPTM1-202ENST00000541297 NCOA2Q15596 1464 aa22.86■■□□□ 1.25
CLPTM1-202ENST00000541297 FAM50AQ14320 339 aaKnown RBP22.85■■□□□ 1.25
CLPTM1-202ENST00000541297 ERCC6L2Q5T890 1561 aa22.85■■□□□ 1.25
CLPTM1-202ENST00000541297 CLASP1Q7Z460 1538 aa22.85■■□□□ 1.25
CLPTM1-202ENST00000541297 PTPRGP23470 1445 aa22.81■■□□□ 1.24
CLPTM1-202ENST00000541297 ABCA8O94911 1581 aa22.8■■□□□ 1.24
CLPTM1-202ENST00000541297 FGD6Q6ZV73 1430 aa22.77■■□□□ 1.24
CLPTM1-202ENST00000541297 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
CLPTM1-202ENST00000541297 MYOM3Q5VTT5 1437 aa22.75■■□□□ 1.23
CLPTM1-202ENST00000541297 CDK11AQ9UQ88 783 aaPredicted RBP22.73■■□□□ 1.23
CLPTM1-202ENST00000541297 ACIN1Q9UKV3 1341 aaKnown RBP22.71■■□□□ 1.23
CLPTM1-202ENST00000541297 ATP10BO94823 1461 aa22.69■■□□□ 1.22
CLPTM1-202ENST00000541297 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
CLPTM1-202ENST00000541297 NEUROD1Q13562 356 aa22.67■■□□□ 1.22
CLPTM1-202ENST00000541297 TROQ12816 1431 aaPredicted RBP22.67■■□□□ 1.22
CLPTM1-202ENST00000541297 UACAQ9BZF9 1416 aa22.67■■□□□ 1.22
CLPTM1-202ENST00000541297 KIF14Q15058 1648 aa22.65■■□□□ 1.22
CLPTM1-202ENST00000541297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.65■■□□□ 1.22
CLPTM1-202ENST00000541297 OSCARQ8IYS5 282 aa22.63■■□□□ 1.21
CLPTM1-202ENST00000541297 PLEKHD1A6NEE1 506 aa22.62■■□□□ 1.21
CLPTM1-202ENST00000541297 ADCY10Q96PN6 1610 aa22.59■■□□□ 1.21
CLPTM1-202ENST00000541297 ABCC2Q92887 1545 aa22.59■■□□□ 1.21
CLPTM1-202ENST00000541297 DIEXFQ68CQ4 756 aaKnown RBP22.58■■□□□ 1.21
CLPTM1-202ENST00000541297 RAB3GAP2Q9H2M9 1393 aa22.57■■□□□ 1.2
CLPTM1-202ENST00000541297 PTPRKQ15262 1439 aa22.57■■□□□ 1.2
CLPTM1-202ENST00000541297 MIA2Q96PC5 1412 aa22.56■■□□□ 1.2
CLPTM1-202ENST00000541297 TCOF1Q13428 1488 aaKnown RBP22.55■■□□□ 1.2
CLPTM1-202ENST00000541297 SETD5Q9C0A6 1442 aa22.54■■□□□ 1.2
CLPTM1-202ENST00000541297 ZNF644Q9H582 1327 aaPredicted RBP22.53■■□□□ 1.2
CLPTM1-202ENST00000541297 ITSN2Q9NZM3 1697 aa22.52■■□□□ 1.2
CLPTM1-202ENST00000541297 DHX57Q6P158 1386 aaKnown RBP22.51■■□□□ 1.19
CLPTM1-202ENST00000541297 GTF3C3Q9Y5Q9 886 aa22.51■■□□□ 1.19
CLPTM1-202ENST00000541297 GPATCH8Q9UKJ3 1502 aaKnown RBP22.5■■□□□ 1.19
CLPTM1-202ENST00000541297 CDC42BPAQ5VT25 1732 aa22.49■■□□□ 1.19
CLPTM1-202ENST00000541297 CHIC2Q9UKJ5 165 aa22.49■■□□□ 1.19
CLPTM1-202ENST00000541297 ZCCHC11Q5TAX3 1644 aaKnown RBP22.49■■□□□ 1.19
CLPTM1-202ENST00000541297 CFDP1Q9UEE9 299 aaPredicted RBP22.49■■□□□ 1.19
CLPTM1-202ENST00000541297 ZNF777Q9ULD5 760 aaPredicted RBP22.48■■□□□ 1.19
CLPTM1-202ENST00000541297 CENPBP07199 599 aaPredicted RBP22.47■■□□□ 1.19
CLPTM1-202ENST00000541297 ABCC10Q5T3U5 1492 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms