RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 KIF27Q86VH2 1401 aa41.95■■■■■ 4.31
LEMD3-203ENST00000541171 KIAA0586Q9BVV6 1533 aa41.8■■■■■ 4.28
LEMD3-203ENST00000541171 CUL7Q14999 1698 aa41.79■■■■■ 4.28
LEMD3-203ENST00000541171 NPM1P06748 294 aaKnown RBP eCLIP41.78■■■■■ 4.28
LEMD3-203ENST00000541171 AEBP2Q6ZN18 517 aaPredicted RBP41.75■■■■■ 4.27
LEMD3-203ENST00000541171 CARMIL1Q5VZK9 1371 aa41.7■■■■■ 4.27
LEMD3-203ENST00000541171 KIF13AQ9H1H9 1805 aa41.68■■■■■ 4.26
LEMD3-203ENST00000541171 FAM69CQ0P6D2 419 aa41.65■■■■■ 4.26
LEMD3-203ENST00000541171 ADCY10Q96PN6 1610 aa41.61■■■■■ 4.25
LEMD3-203ENST00000541171 TTBK1Q5TCY1 1321 aaPredicted RBP41.58■■■■■ 4.25
LEMD3-203ENST00000541171 ABCC10Q5T3U5 1492 aa41.56■■■■■ 4.24
LEMD3-203ENST00000541171 MAPKBP1O60336 1514 aa41.54■■■■■ 4.24
LEMD3-203ENST00000541171 PTPRGP23470 1445 aa41.5■■■■■ 4.23
LEMD3-203ENST00000541171 CARMIL2Q6F5E8 1435 aa41.44■■■■■ 4.22
LEMD3-203ENST00000541171 DIP2BQ9P265 1576 aa41.42■■■■■ 4.22
LEMD3-203ENST00000541171 TNIKQ9UKE5 1360 aa41.39■■■■■ 4.22
LEMD3-203ENST00000541171 IQGAP2Q13576 1575 aa41.37■■■■■ 4.21
LEMD3-203ENST00000541171 RAPGEF2Q9Y4G8 1499 aa41.28■■■■■ 4.2
LEMD3-203ENST00000541171 ABCC2Q92887 1545 aa41.22■■■■■ 4.19
LEMD3-203ENST00000541171 DISP1Q96F81 1524 aa41.2■■■■■ 4.19
LEMD3-203ENST00000541171 TSPOAP1O95153 1857 aa41.19■■■■■ 4.19
LEMD3-203ENST00000541171 UACAQ9BZF9 1416 aa41.15■■■■■ 4.18
LEMD3-203ENST00000541171 ASXL2Q76L83 1435 aa41.12■■■■■ 4.17
LEMD3-203ENST00000541171 KDM6BO15054 1643 aa41.11■■■■■ 4.17
LEMD3-203ENST00000541171 UHRF1BP1LA0JNW5 1464 aa41.11■■■■■ 4.17
LEMD3-203ENST00000541171 UGGT2Q9NYU1 1516 aa41.1■■■■■ 4.17
LEMD3-203ENST00000541171 PLB1Q6P1J6 1458 aa41.08■■■■■ 4.17
LEMD3-203ENST00000541171 KIAA0556O60303 1618 aa41■■■■■ 4.15
LEMD3-203ENST00000541171 GLI2P10070 1586 aa40.94■■■■■ 4.14
LEMD3-203ENST00000541171 KDM5BQ9UGL1 1544 aa40.93■■■■■ 4.14
LEMD3-203ENST00000541171 CTTNBP2Q8WZ74 1663 aa40.86■■■■■ 4.13
LEMD3-203ENST00000541171 ZCCHC11Q5TAX3 1644 aaKnown RBP40.85■■■■■ 4.13
LEMD3-203ENST00000541171 EPRSP07814 1512 aaKnown RBP40.85■■■■■ 4.13
LEMD3-203ENST00000541171 PPRC1Q5VV67 1664 aaKnown RBP40.84■■■■■ 4.13
LEMD3-203ENST00000541171 KDM4FA0A1W2PPD8 638 aa40.82■■■■■ 4.13
LEMD3-203ENST00000541171 PRXQ9BXM0 1461 aa40.8■■■■■ 4.12
LEMD3-203ENST00000541171 GOLGA3Q08378 1498 aa40.79■■■■■ 4.12
LEMD3-203ENST00000541171 MAP3K4Q9Y6R4 1608 aa40.7■■■■■ 4.11
LEMD3-203ENST00000541171 WDR7Q9Y4E6 1490 aa40.68■■■■■ 4.1
LEMD3-203ENST00000541171 TEX14Q8IWB6 1497 aa40.65■■■■■ 4.1
LEMD3-203ENST00000541171 COL17A1Q9UMD9 1497 aaPredicted RBP40.65■■■■■ 4.1
LEMD3-203ENST00000541171 ABCA8O94911 1581 aa40.63■■■■■ 4.09
LEMD3-203ENST00000541171 KCNH8Q96L42 1107 aa40.63■■■■■ 4.09
LEMD3-203ENST00000541171 P3H3Q8IVL6 736 aa40.62■■■■■ 4.09
LEMD3-203ENST00000541171 CSRNP3Q8WYN3 585 aa40.58■■■■■ 4.09
LEMD3-203ENST00000541171 FAM9AQ8IZU1 332 aaPredicted RBP40.54■■■■■ 4.08
LEMD3-203ENST00000541171 ARID3CA6NKF2 412 aa40.53■■■■■ 4.08
LEMD3-203ENST00000541171 CD109Q6YHK3 1445 aa40.49■■■■■ 4.07
LEMD3-203ENST00000541171 ADGRL1O94910 1474 aa40.43■■■■■ 4.06
LEMD3-203ENST00000541171 MAGI3Q5TCQ9 1506 aa40.39■■■■■ 4.06
LEMD3-203ENST00000541171 CFAP43Q8NDM7 1665 aa40.39■■■■■ 4.06
LEMD3-203ENST00000541171 RANGAP1P46060 587 aaPredicted RBP40.36■■■■■ 4.05
LEMD3-203ENST00000541171 ATP10BO94823 1461 aa40.35■■■■■ 4.05
LEMD3-203ENST00000541171 SAMD9Q5K651 1589 aa40.29■■■■■ 4.04
LEMD3-203ENST00000541171 EEA1Q15075 1411 aa40.28■■■■■ 4.04
LEMD3-203ENST00000541171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.25■■■■■ 4.03
LEMD3-203ENST00000541171 HNRNPUL2Q1KMD3 747 aaKnown RBP40.25■■■■■ 4.03
LEMD3-203ENST00000541171 RAPGEF6Q8TEU7 1601 aa40.19■■■■■ 4.02
LEMD3-203ENST00000541171 FHOD3Q2V2M9 1422 aa40.14■■■■■ 4.02
LEMD3-203ENST00000541171 ABCA9Q8IUA7 1624 aa40.08■■■■■ 4.01
LEMD3-203ENST00000541171 ARAP3Q8WWN8 1544 aa40.07■■■■■ 4.01
LEMD3-203ENST00000541171 NUP153P49790 1475 aaKnown RBP40.07■■■■■ 4
LEMD3-203ENST00000541171 PHLDB1Q86UU1 1377 aa39.99■■■■□ 3.99
LEMD3-203ENST00000541171 EHMT2Q96KQ7 1210 aa39.99■■■■□ 3.99
LEMD3-203ENST00000541171 RAPGEF3O95398 923 aa39.97■■■■□ 3.99
LEMD3-203ENST00000541171 KIF21BO75037 1637 aa39.97■■■■□ 3.99
LEMD3-203ENST00000541171 PLEKHD1A6NEE1 506 aa39.95■■■■□ 3.99
LEMD3-203ENST00000541171 NEO1Q92859 1461 aa39.91■■■■□ 3.98
LEMD3-203ENST00000541171 EFCAB5A4FU69 1503 aa39.88■■■■□ 3.97
LEMD3-203ENST00000541171 HECW2Q9P2P5 1572 aa39.87■■■■□ 3.97
LEMD3-203ENST00000541171 UBTFP17480 764 aaKnown RBP39.85■■■■□ 3.97
LEMD3-203ENST00000541171 CHIC1Q5VXU3 224 aa39.77■■■■□ 3.96
LEMD3-203ENST00000541171 ATP1B4Q9UN42 357 aaPredicted RBP39.74■■■■□ 3.95
LEMD3-203ENST00000541171 FRMPD1Q5SYB0 1578 aa39.72■■■■□ 3.95
LEMD3-203ENST00000541171 ARID4BQ4LE39 1312 aaPredicted RBP39.72■■■■□ 3.95
LEMD3-203ENST00000541171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.71■■■■□ 3.956e-6■■■■■ 38.2
LEMD3-203ENST00000541171 CDK13Q14004 1512 aaKnown RBP39.7■■■■□ 3.95
LEMD3-203ENST00000541171 AKNAQ7Z591 1439 aa39.7■■■■□ 3.95
LEMD3-203ENST00000541171 ILDR1Q86SU0 546 aaPredicted RBP39.68■■■■□ 3.94
LEMD3-203ENST00000541171 FANCAO15360 1455 aa39.68■■■■□ 3.94
LEMD3-203ENST00000541171 DENND4BO75064 1496 aaPredicted RBP39.68■■■■□ 3.94
LEMD3-203ENST00000541171 TTC37Q6PGP7 1564 aa39.63■■■■□ 3.94
LEMD3-203ENST00000541171 ADAMTSL3P82987 1691 aa39.61■■■■□ 3.93
LEMD3-203ENST00000541171 PTPRMP28827 1452 aa39.6■■■■□ 3.93
LEMD3-203ENST00000541171 CFAP74Q9C0B2 1584 aa39.59■■■■□ 3.93
LEMD3-203ENST00000541171 FMN1Q68DA7 1419 aa39.58■■■■□ 3.93
LEMD3-203ENST00000541171 ARHGAP35Q9NRY4 1499 aa39.58■■■■□ 3.93
LEMD3-203ENST00000541171 RICTORQ6R327 1708 aa39.55■■■■□ 3.92
LEMD3-203ENST00000541171 BCORL1Q5H9F3 1711 aa39.54■■■■□ 3.92
LEMD3-203ENST00000541171 ARHGEF40Q8TER5 1519 aa39.52■■■■□ 3.92
LEMD3-203ENST00000541171 HECW1Q76N89 1606 aa39.51■■■■□ 3.91
LEMD3-203ENST00000541171 PLCH2O75038 1416 aa39.48■■■■□ 3.91
LEMD3-203ENST00000541171 CDK11AQ9UQ88 783 aaPredicted RBP39.48■■■■□ 3.91
LEMD3-203ENST00000541171 MADDQ8WXG6 1647 aa39.47■■■■□ 3.91
LEMD3-203ENST00000541171 SCAPERQ9BY12 1400 aa39.44■■■■□ 3.9
LEMD3-203ENST00000541171 YEATS2Q9ULM3 1422 aa39.42■■■■□ 3.9
LEMD3-203ENST00000541171 ZMYM4Q5VZL5 1548 aa39.4■■■■□ 3.9
LEMD3-203ENST00000541171 ZFYVE16Q7Z3T8 1539 aa39.4■■■■□ 3.9
LEMD3-203ENST00000541171 EFCAB2Q5VUJ9 269 aa39.39■■■■□ 3.9
LEMD3-203ENST00000541171 PLPPR3Q6T4P5 718 aa39.37■■■■□ 3.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms