RNA–Protein interactions for RNA: ENST00000541099.5

TRIT1-215, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-215ENST00000541099 RIMBP3Q9UFD9 1639 aa19.67■□□□□ 0.74
TRIT1-215ENST00000541099 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
TRIT1-215ENST00000541099 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
TRIT1-215ENST00000541099 FAM9AQ8IZU1 332 aaPredicted RBP19.64■□□□□ 0.73
TRIT1-215ENST00000541099 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
TRIT1-215ENST00000541099 EEA1Q15075 1411 aa19.6■□□□□ 0.73
TRIT1-215ENST00000541099 JPH4Q96JJ6 628 aa19.59■□□□□ 0.73
TRIT1-215ENST00000541099 KIAA0586Q9BVV6 1533 aa19.59■□□□□ 0.73
TRIT1-215ENST00000541099 ARAP1Q96P48 1450 aa19.59■□□□□ 0.73
TRIT1-215ENST00000541099 SHROOM2Q13796 1616 aa19.58■□□□□ 0.73
TRIT1-215ENST00000541099 PRG4Q92954 1404 aaPredicted RBP19.52■□□□□ 0.72
TRIT1-215ENST00000541099 CYB5RLQ6IPT4 315 aa19.52■□□□□ 0.72
TRIT1-215ENST00000541099 IQGAP2Q13576 1575 aa19.46■□□□□ 0.71
TRIT1-215ENST00000541099 KIF21BO75037 1637 aa19.43■□□□□ 0.7
TRIT1-215ENST00000541099 DISP1Q96F81 1524 aa19.41■□□□□ 0.7
TRIT1-215ENST00000541099 UGGT2Q9NYU1 1516 aa19.41■□□□□ 0.7
TRIT1-215ENST00000541099 EHMT2Q96KQ7 1210 aa19.39■□□□□ 0.69
TRIT1-215ENST00000541099 CTTNBP2Q8WZ74 1663 aa19.37■□□□□ 0.69
TRIT1-215ENST00000541099 GOLGA3Q08378 1498 aa19.32■□□□□ 0.68
TRIT1-215ENST00000541099 CARMIL2Q6F5E8 1435 aa19.31■□□□□ 0.68
TRIT1-215ENST00000541099 TNIKQ9UKE5 1360 aa19.31■□□□□ 0.68
TRIT1-215ENST00000541099 KIAA0556O60303 1618 aa19.3■□□□□ 0.68
TRIT1-215ENST00000541099 PTPRGP23470 1445 aa19.29■□□□□ 0.68
TRIT1-215ENST00000541099 TTBK1Q5TCY1 1321 aaPredicted RBP19.27■□□□□ 0.68
TRIT1-215ENST00000541099 UBTFP17480 764 aaKnown RBP19.26■□□□□ 0.67
TRIT1-215ENST00000541099 RANGAP1P46060 587 aaPredicted RBP19.24■□□□□ 0.67
TRIT1-215ENST00000541099 P3H3Q8IVL6 736 aa19.24■□□□□ 0.67
TRIT1-215ENST00000541099 SAMD9Q5K651 1589 aa19.22■□□□□ 0.67
TRIT1-215ENST00000541099 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
TRIT1-215ENST00000541099 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
TRIT1-215ENST00000541099 UACAQ9BZF9 1416 aa19.17■□□□□ 0.66
TRIT1-215ENST00000541099 PLB1Q6P1J6 1458 aa19.16■□□□□ 0.66
TRIT1-215ENST00000541099 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
TRIT1-215ENST00000541099 UHRF1BP1LA0JNW5 1464 aa19.14■□□□□ 0.65
TRIT1-215ENST00000541099 ARHGAP35Q9NRY4 1499 aa19.13■□□□□ 0.65
TRIT1-215ENST00000541099 ABCA8O94911 1581 aa19.12■□□□□ 0.65
TRIT1-215ENST00000541099 ABCC2Q92887 1545 aa19.11■□□□□ 0.65
TRIT1-215ENST00000541099 EFCAB5A4FU69 1503 aa19.1■□□□□ 0.65
TRIT1-215ENST00000541099 KDM5BQ9UGL1 1544 aa19.06■□□□□ 0.64
TRIT1-215ENST00000541099 NPM1P06748 294 aaKnown RBP eCLIP19.03■□□□□ 0.64
TRIT1-215ENST00000541099 MAPKBP1O60336 1514 aa19.03■□□□□ 0.64
TRIT1-215ENST00000541099 ARID3CA6NKF2 412 aa19.01■□□□□ 0.63
TRIT1-215ENST00000541099 TRHP20396 242 aaPredicted RBP19.01■□□□□ 0.63
TRIT1-215ENST00000541099 CLIP1P30622 1438 aa19■□□□□ 0.63
TRIT1-215ENST00000541099 ATP10BO94823 1461 aa18.99■□□□□ 0.63
TRIT1-215ENST00000541099 NUP153P49790 1475 aaKnown RBP18.99■□□□□ 0.63
TRIT1-215ENST00000541099 ZCCHC11Q5TAX3 1644 aaKnown RBP18.99■□□□□ 0.63
TRIT1-215ENST00000541099 ASXL2Q76L83 1435 aa18.99■□□□□ 0.63
TRIT1-215ENST00000541099 RAPGEF6Q8TEU7 1601 aa18.98■□□□□ 0.63
TRIT1-215ENST00000541099 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
TRIT1-215ENST00000541099 CEP162Q5TB80 1403 aa18.96■□□□□ 0.63
TRIT1-215ENST00000541099 FMN1Q68DA7 1419 aa18.92■□□□□ 0.62
TRIT1-215ENST00000541099 DIP2BQ9P265 1576 aa18.92■□□□□ 0.62
TRIT1-215ENST00000541099 FAM69CQ0P6D2 419 aa18.91■□□□□ 0.62
TRIT1-215ENST00000541099 KIF13AQ9H1H9 1805 aa18.9■□□□□ 0.62
TRIT1-215ENST00000541099 WDR7Q9Y4E6 1490 aa18.88■□□□□ 0.61
TRIT1-215ENST00000541099 EPRSP07814 1512 aaKnown RBP18.88■□□□□ 0.61
TRIT1-215ENST00000541099 CDK13Q14004 1512 aaKnown RBP18.87■□□□□ 0.61
TRIT1-215ENST00000541099 CASKIN1Q8WXD9 1431 aa18.85■□□□□ 0.61
TRIT1-215ENST00000541099 PCF11O94913 1555 aaKnown RBP18.85■□□□□ 0.61
TRIT1-215ENST00000541099 ATP1B4Q9UN42 357 aaPredicted RBP18.83■□□□□ 0.6
TRIT1-215ENST00000541099 GLI2P10070 1586 aa18.82■□□□□ 0.6
TRIT1-215ENST00000541099 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
TRIT1-215ENST00000541099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
TRIT1-215ENST00000541099 HNRNPUL2Q1KMD3 747 aaKnown RBP18.81■□□□□ 0.6
TRIT1-215ENST00000541099 HECW1Q76N89 1606 aa18.81■□□□□ 0.6
TRIT1-215ENST00000541099 LRRIQ1Q96JM4 1722 aa18.8■□□□□ 0.6
TRIT1-215ENST00000541099 FYCO1Q9BQS8 1478 aa18.77■□□□□ 0.59
TRIT1-215ENST00000541099 PLEKHD1A6NEE1 506 aa18.75■□□□□ 0.59
TRIT1-215ENST00000541099 PPRC1Q5VV67 1664 aaKnown RBP18.74■□□□□ 0.59
TRIT1-215ENST00000541099 MAP3K4Q9Y6R4 1608 aa18.74■□□□□ 0.59
TRIT1-215ENST00000541099 MAGI3Q5TCQ9 1506 aa18.73■□□□□ 0.59
TRIT1-215ENST00000541099 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.59
TRIT1-215ENST00000541099 TSPOAP1O95153 1857 aa18.7■□□□□ 0.58
TRIT1-215ENST00000541099 CD109Q6YHK3 1445 aa18.7■□□□□ 0.58
TRIT1-215ENST00000541099 CCDC18Q5T9S5 1454 aa18.69■□□□□ 0.58
TRIT1-215ENST00000541099 TROQ12816 1431 aaPredicted RBP18.68■□□□□ 0.58
TRIT1-215ENST00000541099 ABCA9Q8IUA7 1624 aa18.68■□□□□ 0.58
TRIT1-215ENST00000541099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■■■■■ 51.7
TRIT1-215ENST00000541099 COL17A1Q9UMD9 1497 aaPredicted RBP18.65■□□□□ 0.58
TRIT1-215ENST00000541099 KIF14Q15058 1648 aa18.65■□□□□ 0.58
TRIT1-215ENST00000541099 CFAP43Q8NDM7 1665 aa18.65■□□□□ 0.58
TRIT1-215ENST00000541099 TTC37Q6PGP7 1564 aa18.64■□□□□ 0.57
TRIT1-215ENST00000541099 CDK11AQ9UQ88 783 aaPredicted RBP18.63■□□□□ 0.57
TRIT1-215ENST00000541099 FOXD1Q16676 465 aa18.6■□□□□ 0.57
TRIT1-215ENST00000541099 TEX14Q8IWB6 1497 aa18.58■□□□□ 0.57
TRIT1-215ENST00000541099 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
TRIT1-215ENST00000541099 KANK4Q5T7N3 995 aaPredicted RBP18.56■□□□□ 0.56
TRIT1-215ENST00000541099 PLCH2O75038 1416 aa18.56■□□□□ 0.56
TRIT1-215ENST00000541099 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
TRIT1-215ENST00000541099 KDM6BO15054 1643 aa18.53■□□□□ 0.56
TRIT1-215ENST00000541099 MTUS2Q5JR59 1369 aa18.53■□□□□ 0.56
TRIT1-215ENST00000541099 FANCAO15360 1455 aa18.51■□□□□ 0.55
TRIT1-215ENST00000541099 NEO1Q92859 1461 aa18.51■□□□□ 0.55
TRIT1-215ENST00000541099 MAP3K1Q13233 1512 aa18.5■□□□□ 0.55
TRIT1-215ENST00000541099 EHBP1L1Q8N3D4 1523 aa18.5■□□□□ 0.55
TRIT1-215ENST00000541099 LRRC9Q6ZRR7 1453 aa18.5■□□□□ 0.55
TRIT1-215ENST00000541099 ARAP3Q8WWN8 1544 aa18.49■□□□□ 0.55
TRIT1-215ENST00000541099 GPATCH8Q9UKJ3 1502 aaKnown RBP18.49■□□□□ 0.55
TRIT1-215ENST00000541099 AKNAQ7Z591 1439 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms