RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 RUSC2Q8N2Y8 1516 aa25.17■■□□□ 1.62
MSRB3-209ENST00000540804 CUL7Q14999 1698 aa25.07■■□□□ 1.6
MSRB3-209ENST00000540804 CARMIL1Q5VZK9 1371 aa25.06■■□□□ 1.6
MSRB3-209ENST00000540804 KIAA0586Q9BVV6 1533 aa25.05■■□□□ 1.6
MSRB3-209ENST00000540804 TTBK1Q5TCY1 1321 aaPredicted RBP24.93■■□□□ 1.58
MSRB3-209ENST00000540804 ADCY10Q96PN6 1610 aa24.88■■□□□ 1.57
MSRB3-209ENST00000540804 NPM1P06748 294 aaKnown RBP eCLIP24.86■■□□□ 1.57
MSRB3-209ENST00000540804 PTPRGP23470 1445 aa24.83■■□□□ 1.57
MSRB3-209ENST00000540804 RAPGEF2Q9Y4G8 1499 aa24.83■■□□□ 1.56
MSRB3-209ENST00000540804 IQGAP2Q13576 1575 aa24.81■■□□□ 1.56
MSRB3-209ENST00000540804 FAM69CQ0P6D2 419 aa24.81■■□□□ 1.56
MSRB3-209ENST00000540804 KIF13AQ9H1H9 1805 aa24.8■■□□□ 1.56
MSRB3-209ENST00000540804 TNIKQ9UKE5 1360 aa24.79■■□□□ 1.56
MSRB3-209ENST00000540804 CARMIL2Q6F5E8 1435 aa24.78■■□□□ 1.56
MSRB3-209ENST00000540804 ABCC10Q5T3U5 1492 aa24.77■■□□□ 1.56
MSRB3-209ENST00000540804 MAPKBP1O60336 1514 aa24.76■■□□□ 1.55
MSRB3-209ENST00000540804 DISP1Q96F81 1524 aa24.76■■□□□ 1.55
MSRB3-209ENST00000540804 DIP2BQ9P265 1576 aa24.71■■□□□ 1.55
MSRB3-209ENST00000540804 UGGT2Q9NYU1 1516 aa24.67■■□□□ 1.54
MSRB3-209ENST00000540804 ABCC2Q92887 1545 aa24.65■■□□□ 1.54
MSRB3-209ENST00000540804 UACAQ9BZF9 1416 aa24.63■■□□□ 1.53
MSRB3-209ENST00000540804 PRXQ9BXM0 1461 aa24.62■■□□□ 1.53
MSRB3-209ENST00000540804 KIAA0556O60303 1618 aa24.61■■□□□ 1.53
MSRB3-209ENST00000540804 UHRF1BP1LA0JNW5 1464 aa24.59■■□□□ 1.53
MSRB3-209ENST00000540804 ASXL2Q76L83 1435 aa24.58■■□□□ 1.53
MSRB3-209ENST00000540804 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
MSRB3-209ENST00000540804 CTTNBP2Q8WZ74 1663 aa24.53■■□□□ 1.52
MSRB3-209ENST00000540804 TSPOAP1O95153 1857 aa24.51■■□□□ 1.51
MSRB3-209ENST00000540804 PLB1Q6P1J6 1458 aa24.51■■□□□ 1.51
MSRB3-209ENST00000540804 CSRNP3Q8WYN3 585 aa24.5■■□□□ 1.51
MSRB3-209ENST00000540804 KDM5BQ9UGL1 1544 aa24.5■■□□□ 1.51
MSRB3-209ENST00000540804 P3H3Q8IVL6 736 aa24.46■■□□□ 1.51
MSRB3-209ENST00000540804 ZCCHC11Q5TAX3 1644 aaKnown RBP24.46■■□□□ 1.51
MSRB3-209ENST00000540804 KDM6BO15054 1643 aa24.45■■□□□ 1.5
MSRB3-209ENST00000540804 GOLGA3Q08378 1498 aa24.45■■□□□ 1.5
MSRB3-209ENST00000540804 FAM9AQ8IZU1 332 aaPredicted RBP24.43■■□□□ 1.5
MSRB3-209ENST00000540804 EPRSP07814 1512 aaKnown RBP24.43■■□□□ 1.5
MSRB3-209ENST00000540804 GLI2P10070 1586 aa24.42■■□□□ 1.5
MSRB3-209ENST00000540804 PPRC1Q5VV67 1664 aaKnown RBP24.39■■□□□ 1.49
MSRB3-209ENST00000540804 ABCA8O94911 1581 aa24.38■■□□□ 1.49
MSRB3-209ENST00000540804 ARID3CA6NKF2 412 aa24.36■■□□□ 1.49
MSRB3-209ENST00000540804 RANGAP1P46060 587 aaPredicted RBP24.35■■□□□ 1.49
MSRB3-209ENST00000540804 WDR7Q9Y4E6 1490 aa24.33■■□□□ 1.49
MSRB3-209ENST00000540804 KCNH8Q96L42 1107 aa24.31■■□□□ 1.48
MSRB3-209ENST00000540804 MAP3K4Q9Y6R4 1608 aa24.31■■□□□ 1.48
MSRB3-209ENST00000540804 COL17A1Q9UMD9 1497 aaPredicted RBP24.31■■□□□ 1.48
MSRB3-209ENST00000540804 EEA1Q15075 1411 aa24.3■■□□□ 1.48
MSRB3-209ENST00000540804 KDM4FA0A1W2PPD8 638 aa24.26■■□□□ 1.47
MSRB3-209ENST00000540804 SAMD9Q5K651 1589 aa24.25■■□□□ 1.47
MSRB3-209ENST00000540804 EHMT2Q96KQ7 1210 aa24.25■■□□□ 1.47
MSRB3-209ENST00000540804 ATP10BO94823 1461 aa24.22■■□□□ 1.47
MSRB3-209ENST00000540804 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
MSRB3-209ENST00000540804 TEX14Q8IWB6 1497 aa24.2■■□□□ 1.47
MSRB3-209ENST00000540804 FHOD3Q2V2M9 1422 aa24.19■■□□□ 1.46
MSRB3-209ENST00000540804 CD109Q6YHK3 1445 aa24.19■■□□□ 1.46
MSRB3-209ENST00000540804 MAGI3Q5TCQ9 1506 aa24.13■■□□□ 1.45
MSRB3-209ENST00000540804 KIF21BO75037 1637 aa24.13■■□□□ 1.45
MSRB3-209ENST00000540804 RAPGEF6Q8TEU7 1601 aa24.13■■□□□ 1.45
MSRB3-209ENST00000540804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.12■■□□□ 1.45
MSRB3-209ENST00000540804 HNRNPUL2Q1KMD3 747 aaKnown RBP24.12■■□□□ 1.45
MSRB3-209ENST00000540804 CFAP43Q8NDM7 1665 aa24.11■■□□□ 1.45
MSRB3-209ENST00000540804 NUP153P49790 1475 aaKnown RBP24.09■■□□□ 1.45
MSRB3-209ENST00000540804 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
MSRB3-209ENST00000540804 ADGRL1O94910 1474 aa24.04■■□□□ 1.44
MSRB3-209ENST00000540804 EFCAB5A4FU69 1503 aa24■■□□□ 1.43
MSRB3-209ENST00000540804 ABCA9Q8IUA7 1624 aa23.99■■□□□ 1.43
MSRB3-209ENST00000540804 PLEKHD1A6NEE1 506 aa23.93■■□□□ 1.42
MSRB3-209ENST00000540804 ARAP3Q8WWN8 1544 aa23.93■■□□□ 1.42
MSRB3-209ENST00000540804 RAPGEF3O95398 923 aa23.92■■□□□ 1.42
MSRB3-209ENST00000540804 CDK13Q14004 1512 aaKnown RBP23.91■■□□□ 1.42
MSRB3-209ENST00000540804 ARHGAP35Q9NRY4 1499 aa23.91■■□□□ 1.42
MSRB3-209ENST00000540804 ATP1B4Q9UN42 357 aaPredicted RBP23.9■■□□□ 1.42
MSRB3-209ENST00000540804 NEO1Q92859 1461 aa23.85■■□□□ 1.41
MSRB3-209ENST00000540804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.84■■□□□ 1.41
MSRB3-209ENST00000540804 PHLDB1Q86UU1 1377 aa23.83■■□□□ 1.41
MSRB3-209ENST00000540804 TTC37Q6PGP7 1564 aa23.81■■□□□ 1.4
MSRB3-209ENST00000540804 FRMPD1Q5SYB0 1578 aa23.8■■□□□ 1.4
MSRB3-209ENST00000540804 FMN1Q68DA7 1419 aa23.8■■□□□ 1.4
MSRB3-209ENST00000540804 AKNAQ7Z591 1439 aa23.76■■□□□ 1.39
MSRB3-209ENST00000540804 FANCAO15360 1455 aa23.76■■□□□ 1.39
MSRB3-209ENST00000540804 HECW1Q76N89 1606 aa23.75■■□□□ 1.39
MSRB3-209ENST00000540804 DENND4BO75064 1496 aaPredicted RBP23.72■■□□□ 1.39
MSRB3-209ENST00000540804 PLCH2O75038 1416 aa23.67■■□□□ 1.38
MSRB3-209ENST00000540804 KIF14Q15058 1648 aa23.66■■□□□ 1.38
MSRB3-209ENST00000540804 ARID4BQ4LE39 1312 aaPredicted RBP23.66■■□□□ 1.38
MSRB3-209ENST00000540804 RICTORQ6R327 1708 aa23.65■■□□□ 1.38
MSRB3-209ENST00000540804 LRRIQ1Q96JM4 1722 aa23.65■■□□□ 1.38
MSRB3-209ENST00000540804 CDK11AQ9UQ88 783 aaPredicted RBP23.65■■□□□ 1.38
MSRB3-209ENST00000540804 CFAP74Q9C0B2 1584 aa23.65■■□□□ 1.38
MSRB3-209ENST00000540804 HECW2Q9P2P5 1572 aa23.65■■□□□ 1.38
MSRB3-209ENST00000540804 TROQ12816 1431 aaPredicted RBP23.63■■□□□ 1.37
MSRB3-209ENST00000540804 SCAPERQ9BY12 1400 aa23.63■■□□□ 1.37
MSRB3-209ENST00000540804 YEATS2Q9ULM3 1422 aa23.63■■□□□ 1.37
MSRB3-209ENST00000540804 PCF11O94913 1555 aaKnown RBP23.62■■□□□ 1.37
MSRB3-209ENST00000540804 ARHGEF40Q8TER5 1519 aa23.61■■□□□ 1.37
MSRB3-209ENST00000540804 ADAMTSL3P82987 1691 aa23.6■■□□□ 1.37
MSRB3-209ENST00000540804 CASKIN1Q8WXD9 1431 aa23.59■■□□□ 1.37
MSRB3-209ENST00000540804 PTPRMP28827 1452 aa23.58■■□□□ 1.37
MSRB3-209ENST00000540804 EFCAB2Q5VUJ9 269 aa23.58■■□□□ 1.37
MSRB3-209ENST00000540804 ZMYM4Q5VZL5 1548 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms