RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ERICH3Q5RHP9 1530 aa23.05■■□□□ 1.28
CYB561A3-216ENST00000540755 PRXQ9BXM0 1461 aa23.04■■□□□ 1.28
CYB561A3-216ENST00000540755 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
CYB561A3-216ENST00000540755 ERCC6L2Q5T890 1561 aa23.02■■□□□ 1.28
CYB561A3-216ENST00000540755 IGF1RP08069 1367 aa23■■□□□ 1.27
CYB561A3-216ENST00000540755 SHROOM2Q13796 1616 aa22.98■■□□□ 1.27
CYB561A3-216ENST00000540755 EHMT2Q96KQ7 1210 aa22.98■■□□□ 1.27
CYB561A3-216ENST00000540755 RAPGEF2Q9Y4G8 1499 aa22.96■■□□□ 1.27
CYB561A3-216ENST00000540755 TNIKQ9UKE5 1360 aa22.96■■□□□ 1.27
CYB561A3-216ENST00000540755 TRHP20396 242 aaPredicted RBP22.95■■□□□ 1.26
CYB561A3-216ENST00000540755 CUL7Q14999 1698 aa22.94■■□□□ 1.26
CYB561A3-216ENST00000540755 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
CYB561A3-216ENST00000540755 UBTFP17480 764 aaKnown RBP22.87■■□□□ 1.25
CYB561A3-216ENST00000540755 CEP162Q5TB80 1403 aa22.79■■□□□ 1.24
CYB561A3-216ENST00000540755 PRG4Q92954 1404 aaPredicted RBP22.77■■□□□ 1.24
CYB561A3-216ENST00000540755 JPH4Q96JJ6 628 aa22.71■■□□□ 1.23
CYB561A3-216ENST00000540755 CTTNBP2Q8WZ74 1663 aa22.67■■□□□ 1.22
CYB561A3-216ENST00000540755 CLIP1P30622 1438 aa22.66■■□□□ 1.22
CYB561A3-216ENST00000540755 KIAA0586Q9BVV6 1533 aa22.65■■□□□ 1.22
CYB561A3-216ENST00000540755 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
CYB561A3-216ENST00000540755 ADCY10Q96PN6 1610 aa22.58■■□□□ 1.2
CYB561A3-216ENST00000540755 MAPKBP1O60336 1514 aa22.52■■□□□ 1.2
CYB561A3-216ENST00000540755 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
CYB561A3-216ENST00000540755 IQGAP2Q13576 1575 aa22.47■■□□□ 1.19
CYB561A3-216ENST00000540755 EFCAB5A4FU69 1503 aa22.47■■□□□ 1.19
CYB561A3-216ENST00000540755 ABCC10Q5T3U5 1492 aa22.47■■□□□ 1.19
CYB561A3-216ENST00000540755 VPS8Q8N3P4 1428 aa22.47■■□□□ 1.19
CYB561A3-216ENST00000540755 RANGAP1P46060 587 aaPredicted RBP22.47■■□□□ 1.19
CYB561A3-216ENST00000540755 DIP2BQ9P265 1576 aa22.46■■□□□ 1.19
CYB561A3-216ENST00000540755 SAMD9Q5K651 1589 aa22.41■■□□□ 1.18
CYB561A3-216ENST00000540755 PTPRGP23470 1445 aa22.39■■□□□ 1.17
CYB561A3-216ENST00000540755 DISP1Q96F81 1524 aa22.38■■□□□ 1.17
CYB561A3-216ENST00000540755 CARMIL2Q6F5E8 1435 aa22.37■■□□□ 1.17
CYB561A3-216ENST00000540755 NPM1P06748 294 aaKnown RBP eCLIP22.36■■□□□ 1.17
CYB561A3-216ENST00000540755 FAM69CQ0P6D2 419 aa22.35■■□□□ 1.17
CYB561A3-216ENST00000540755 UGGT2Q9NYU1 1516 aa22.34■■□□□ 1.17
CYB561A3-216ENST00000540755 ABCC2Q92887 1545 aa22.32■■□□□ 1.16
CYB561A3-216ENST00000540755 UHRF1BP1LA0JNW5 1464 aa22.3■■□□□ 1.16
CYB561A3-216ENST00000540755 KIAA0556O60303 1618 aa22.29■■□□□ 1.16
CYB561A3-216ENST00000540755 FHOD3Q2V2M9 1422 aa22.28■■□□□ 1.16
CYB561A3-216ENST00000540755 TTBK1Q5TCY1 1321 aaPredicted RBP22.28■■□□□ 1.16
CYB561A3-216ENST00000540755 UACAQ9BZF9 1416 aa22.25■■□□□ 1.15
CYB561A3-216ENST00000540755 FMN1Q68DA7 1419 aa22.23■■□□□ 1.15
CYB561A3-216ENST00000540755 ASXL2Q76L83 1435 aa22.23■■□□□ 1.15
CYB561A3-216ENST00000540755 TSPOAP1O95153 1857 aa22.22■■□□□ 1.15
CYB561A3-216ENST00000540755 P3H3Q8IVL6 736 aa22.22■■□□□ 1.15
CYB561A3-216ENST00000540755 PCF11O94913 1555 aaKnown RBP22.2■■□□□ 1.14
CYB561A3-216ENST00000540755 KDM5BQ9UGL1 1544 aa22.2■■□□□ 1.14
CYB561A3-216ENST00000540755 KDM6BO15054 1643 aa22.2■■□□□ 1.14
CYB561A3-216ENST00000540755 PLB1Q6P1J6 1458 aa22.19■■□□□ 1.14
CYB561A3-216ENST00000540755 GLI2P10070 1586 aa22.19■■□□□ 1.14
CYB561A3-216ENST00000540755 PPRC1Q5VV67 1664 aaKnown RBP22.19■■□□□ 1.14
CYB561A3-216ENST00000540755 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
CYB561A3-216ENST00000540755 APLP2Q06481 763 aa22.17■■□□□ 1.14
CYB561A3-216ENST00000540755 FYCO1Q9BQS8 1478 aa22.17■■□□□ 1.14
CYB561A3-216ENST00000540755 ZCCHC11Q5TAX3 1644 aaKnown RBP22.16■■□□□ 1.14
CYB561A3-216ENST00000540755 CASKIN1Q8WXD9 1431 aa22.16■■□□□ 1.14
CYB561A3-216ENST00000540755 MAP3K1Q13233 1512 aa22.16■■□□□ 1.14
CYB561A3-216ENST00000540755 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
CYB561A3-216ENST00000540755 EPRSP07814 1512 aaKnown RBP22.11■■□□□ 1.13
CYB561A3-216ENST00000540755 TRIM26Q12899 539 aaPredicted RBP22.11■■□□□ 1.13
CYB561A3-216ENST00000540755 TIAM1Q13009 1591 aa22.11■■□□□ 1.13
CYB561A3-216ENST00000540755 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
CYB561A3-216ENST00000540755 MAP3K4Q9Y6R4 1608 aa22.09■■□□□ 1.13
CYB561A3-216ENST00000540755 ABCA8O94911 1581 aa22.08■■□□□ 1.13
CYB561A3-216ENST00000540755 LRRIQ1Q96JM4 1722 aa22.05■■□□□ 1.12
CYB561A3-216ENST00000540755 HECW1Q76N89 1606 aa22.04■■□□□ 1.12
CYB561A3-216ENST00000540755 WDR7Q9Y4E6 1490 aa22.03■■□□□ 1.12
CYB561A3-216ENST00000540755 PCGF6Q9BYE7 350 aa22■■□□□ 1.11
CYB561A3-216ENST00000540755 COL17A1Q9UMD9 1497 aaPredicted RBP22■■□□□ 1.11
CYB561A3-216ENST00000540755 RAPGEF6Q8TEU7 1601 aa21.99■■□□□ 1.11
CYB561A3-216ENST00000540755 CCDC18Q5T9S5 1454 aa21.98■■□□□ 1.11
CYB561A3-216ENST00000540755 LRRC9Q6ZRR7 1453 aa21.97■■□□□ 1.11
CYB561A3-216ENST00000540755 KANK4Q5T7N3 995 aaPredicted RBP21.96■■□□□ 1.11
CYB561A3-216ENST00000540755 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
CYB561A3-216ENST00000540755 TEX14Q8IWB6 1497 aa21.95■■□□□ 1.1
CYB561A3-216ENST00000540755 KDM4FA0A1W2PPD8 638 aa21.93■■□□□ 1.1
CYB561A3-216ENST00000540755 NUP153P49790 1475 aaKnown RBP21.89■■□□□ 1.1
CYB561A3-216ENST00000540755 MAGI3Q5TCQ9 1506 aa21.88■■□□□ 1.09
CYB561A3-216ENST00000540755 EHBP1L1Q8N3D4 1523 aa21.86■■□□□ 1.09
CYB561A3-216ENST00000540755 ATP10BO94823 1461 aa21.86■■□□□ 1.09
CYB561A3-216ENST00000540755 CD109Q6YHK3 1445 aa21.85■■□□□ 1.09
CYB561A3-216ENST00000540755 CDK13Q14004 1512 aaKnown RBP21.84■■□□□ 1.09
CYB561A3-216ENST00000540755 MTUS2Q5JR59 1369 aa21.82■■□□□ 1.08
CYB561A3-216ENST00000540755 ADGRL1O94910 1474 aa21.81■■□□□ 1.08
CYB561A3-216ENST00000540755 SUPT6HQ7KZ85 1726 aaKnown RBP21.81■■□□□ 1.08
CYB561A3-216ENST00000540755 ARID3CA6NKF2 412 aa21.8■■□□□ 1.08
CYB561A3-216ENST00000540755 KCNH8Q96L42 1107 aa21.8■■□□□ 1.08
CYB561A3-216ENST00000540755 RRBP1Q9P2E9 1410 aaKnown RBP21.78■■□□□ 1.08
CYB561A3-216ENST00000540755 ABCA9Q8IUA7 1624 aa21.77■■□□□ 1.08
CYB561A3-216ENST00000540755 PHLDB1Q86UU1 1377 aa21.73■■□□□ 1.07
CYB561A3-216ENST00000540755 CDK11AQ9UQ88 783 aaPredicted RBP21.71■■□□□ 1.07
CYB561A3-216ENST00000540755 NCOA2Q15596 1464 aa21.71■■□□□ 1.07
CYB561A3-216ENST00000540755 ARAP3Q8WWN8 1544 aa21.7■■□□□ 1.06
CYB561A3-216ENST00000540755 CCNB3Q8WWL7 1395 aa21.69■■□□□ 1.06
CYB561A3-216ENST00000540755 TROQ12816 1431 aaPredicted RBP21.68■■□□□ 1.06
CYB561A3-216ENST00000540755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.66■■□□□ 1.06
CYB561A3-216ENST00000540755 HNRNPUL2Q1KMD3 747 aaKnown RBP21.66■■□□□ 1.06
CYB561A3-216ENST00000540755 MYOM3Q5VTT5 1437 aa21.63■■□□□ 1.05
CYB561A3-216ENST00000540755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.61■■□□□ 1.051e-6■□□□□ 8.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms