RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 KANK4Q5T7N3 995 aaPredicted RBP14.5□□□□□ -0.09
LCOR-209ENST00000540664 TDRD9Q8NDG6 1382 aaKnown RBP14.49□□□□□ -0.09
LCOR-209ENST00000540664 WDR62O43379 1518 aa14.49□□□□□ -0.09
LCOR-209ENST00000540664 TIAM1Q13009 1591 aa14.48□□□□□ -0.09
LCOR-209ENST00000540664 RRBP1Q9P2E9 1410 aaKnown RBP14.48□□□□□ -0.09
LCOR-209ENST00000540664 FHAD1B1AJZ9 1412 aa14.47□□□□□ -0.09
LCOR-209ENST00000540664 ERCC6Q03468 1493 aa14.45□□□□□ -0.1
LCOR-209ENST00000540664 CFAP43Q8NDM7 1665 aa14.45□□□□□ -0.1
LCOR-209ENST00000540664 PBRM1Q86U86 1689 aa14.44□□□□□ -0.1
LCOR-209ENST00000540664 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.19e-7■■■■□ 21.8
LCOR-209ENST00000540664 PCF11O94913 1555 aaKnown RBP14.43□□□□□ -0.1
LCOR-209ENST00000540664 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
LCOR-209ENST00000540664 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
LCOR-209ENST00000540664 SAMD9Q5K651 1589 aa14.42□□□□□ -0.1
LCOR-209ENST00000540664 IFT140Q96RY7 1462 aa14.41□□□□□ -0.1
LCOR-209ENST00000540664 FYCO1Q9BQS8 1478 aa14.41□□□□□ -0.1
LCOR-209ENST00000540664 LRRC9Q6ZRR7 1453 aa14.4□□□□□ -0.1
LCOR-209ENST00000540664 FHOD3Q2V2M9 1422 aa14.4□□□□□ -0.1
LCOR-209ENST00000540664 CASKIN1Q8WXD9 1431 aa14.39□□□□□ -0.11
LCOR-209ENST00000540664 ADAMTS12P58397 1594 aa14.37□□□□□ -0.11
LCOR-209ENST00000540664 CCNB3Q8WWL7 1395 aa14.37□□□□□ -0.11
LCOR-209ENST00000540664 FMN1Q68DA7 1419 aa14.36□□□□□ -0.11
LCOR-209ENST00000540664 SNAPC4Q5SXM2 1469 aa14.35□□□□□ -0.11
LCOR-209ENST00000540664 ZNF608Q9ULD9 1512 aaPredicted RBP14.35□□□□□ -0.11
LCOR-209ENST00000540664 GRIN2BQ13224 1484 aa14.34□□□□□ -0.11
LCOR-209ENST00000540664 P3H3Q8IVL6 736 aa14.33□□□□□ -0.12
LCOR-209ENST00000540664 EIF4G3O43432 1585 aaKnown RBP14.32□□□□□ -0.12
LCOR-209ENST00000540664 SENP3Q9H4L4 574 aaPredicted RBP14.31□□□□□ -0.12
LCOR-209ENST00000540664 PHLDB1Q86UU1 1377 aa14.29□□□□□ -0.12
LCOR-209ENST00000540664 CLSPNQ9HAW4 1339 aa14.28□□□□□ -0.12
LCOR-209ENST00000540664 IQGAP2Q13576 1575 aa14.28□□□□□ -0.12
LCOR-209ENST00000540664 LRRIQ1Q96JM4 1722 aa14.28□□□□□ -0.12
LCOR-209ENST00000540664 DHX57Q6P158 1386 aaKnown RBP14.27□□□□□ -0.13
LCOR-209ENST00000540664 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.24□□□□□ -0.13
LCOR-209ENST00000540664 UGGT2Q9NYU1 1516 aa14.23□□□□□ -0.13
LCOR-209ENST00000540664 MAGI1Q96QZ7 1491 aaPredicted RBP14.2□□□□□ -0.14
LCOR-209ENST00000540664 KIAA0586Q9BVV6 1533 aa14.19□□□□□ -0.14
LCOR-209ENST00000540664 ATP1B4Q9UN42 357 aaPredicted RBP14.19□□□□□ -0.14
LCOR-209ENST00000540664 CCDC18Q5T9S5 1454 aa14.19□□□□□ -0.14
LCOR-209ENST00000540664 GRIN2AQ12879 1464 aa14.18□□□□□ -0.14
LCOR-209ENST00000540664 EHBP1L1Q8N3D4 1523 aa14.18□□□□□ -0.14
LCOR-209ENST00000540664 HECW1Q76N89 1606 aa14.18□□□□□ -0.14
LCOR-209ENST00000540664 ARHGEF11O15085 1522 aa14.17□□□□□ -0.14
LCOR-209ENST00000540664 FGD6Q6ZV73 1430 aa14.16□□□□□ -0.14
LCOR-209ENST00000540664 RAB3GAP2Q9H2M9 1393 aa14.16□□□□□ -0.14
LCOR-209ENST00000540664 SUPT6HQ7KZ85 1726 aaKnown RBP14.15□□□□□ -0.14
LCOR-209ENST00000540664 SETD5Q9C0A6 1442 aa14.15□□□□□ -0.14
LCOR-209ENST00000540664 MTUS2Q5JR59 1369 aa14.15□□□□□ -0.14
LCOR-209ENST00000540664 SYNJ2O15056 1496 aa14.15□□□□□ -0.14
LCOR-209ENST00000540664 NCOA2Q15596 1464 aa14.14□□□□□ -0.15
LCOR-209ENST00000540664 KIAA0556O60303 1618 aa14.14□□□□□ -0.15
LCOR-209ENST00000540664 MAGI3Q5TCQ9 1506 aa14.14□□□□□ -0.15
LCOR-209ENST00000540664 DISP1Q96F81 1524 aa14.14□□□□□ -0.15
LCOR-209ENST00000540664 ZNF316A6NFI3 1004 aaPredicted RBP14.14□□□□□ -0.15
LCOR-209ENST00000540664 ITGAEP38570 1179 aa14.12□□□□□ -0.15
LCOR-209ENST00000540664 EPRSP07814 1512 aaKnown RBP14.12□□□□□ -0.15
LCOR-209ENST00000540664 MYOM3Q5VTT5 1437 aa14.11□□□□□ -0.15
LCOR-209ENST00000540664 CEP170Q5SW79 1584 aa14.11□□□□□ -0.15
LCOR-209ENST00000540664 MAPKBP1O60336 1514 aa14.1□□□□□ -0.15
LCOR-209ENST00000540664 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
LCOR-209ENST00000540664 DIEXFQ68CQ4 756 aaKnown RBP14.1□□□□□ -0.15
LCOR-209ENST00000540664 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
LCOR-209ENST00000540664 NUP160Q12769 1436 aa14.07□□□□□ -0.16
LCOR-209ENST00000540664 TCOF1Q13428 1488 aaKnown RBP14.06□□□□□ -0.16
LCOR-209ENST00000540664 CDK13Q14004 1512 aaKnown RBP14.06□□□□□ -0.16
LCOR-209ENST00000540664 PTPN23Q9H3S7 1636 aa14.05□□□□□ -0.16
LCOR-209ENST00000540664 RAPGEF6Q8TEU7 1601 aa14.05□□□□□ -0.16
LCOR-209ENST00000540664 PTPRKQ15262 1439 aa14.04□□□□□ -0.16
LCOR-209ENST00000540664 FBLN2P98095 1184 aa14.04□□□□□ -0.16
LCOR-209ENST00000540664 NUP153P49790 1475 aaKnown RBP14.03□□□□□ -0.16
LCOR-209ENST00000540664 HFM1A2PYH4 1435 aa14.03□□□□□ -0.16
LCOR-209ENST00000540664 MIA2Q96PC5 1412 aa14.01□□□□□ -0.17
LCOR-209ENST00000540664 CHD1O14646 1710 aa13.99□□□□□ -0.17
LCOR-209ENST00000540664 NAIPQ13075 1403 aa13.98□□□□□ -0.17
LCOR-209ENST00000540664 AKNAQ7Z591 1439 aa13.97□□□□□ -0.17
LCOR-209ENST00000540664 CARMIL2Q6F5E8 1435 aa13.96□□□□□ -0.18
LCOR-209ENST00000540664 GCC2Q8IWJ2 1684 aa13.95□□□□□ -0.18
LCOR-209ENST00000540664 UACAQ9BZF9 1416 aa13.95□□□□□ -0.18
LCOR-209ENST00000540664 JPH4Q96JJ6 628 aa13.94□□□□□ -0.18
LCOR-209ENST00000540664 TIMELESSQ9UNS1 1208 aa13.93□□□□□ -0.18
LCOR-209ENST00000540664 ADCY10Q96PN6 1610 aa13.93□□□□□ -0.18
LCOR-209ENST00000540664 PLB1Q6P1J6 1458 aa13.93□□□□□ -0.18
LCOR-209ENST00000540664 ABCA8O94911 1581 aa13.92□□□□□ -0.18
LCOR-209ENST00000540664 TROQ12816 1431 aaPredicted RBP13.91□□□□□ -0.18
LCOR-209ENST00000540664 CDK11AQ9UQ88 783 aaPredicted RBP13.9□□□□□ -0.18
LCOR-209ENST00000540664 DNMT1P26358 1616 aaKnown RBP13.89□□□□□ -0.19
LCOR-209ENST00000540664 ARID3CA6NKF2 412 aa13.88□□□□□ -0.19
LCOR-209ENST00000540664 PRG4Q92954 1404 aaPredicted RBP13.87□□□□□ -0.19
LCOR-209ENST00000540664 SIN3AQ96ST3 1273 aa13.87□□□□□ -0.19
LCOR-209ENST00000540664 ITSN2Q9NZM3 1697 aa13.87□□□□□ -0.19
LCOR-209ENST00000540664 ROCK1Q13464 1354 aa13.86□□□□□ -0.19
LCOR-209ENST00000540664 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
LCOR-209ENST00000540664 DAPK1P53355 1430 aa13.86□□□□□ -0.19
LCOR-209ENST00000540664 KIF14Q15058 1648 aa13.85□□□□□ -0.19
LCOR-209ENST00000540664 KDM6BO15054 1643 aa13.85□□□□□ -0.19
LCOR-209ENST00000540664 ABCC5O15440 1437 aa13.84□□□□□ -0.19
LCOR-209ENST00000540664 GPATCH8Q9UKJ3 1502 aaKnown RBP13.84□□□□□ -0.19
LCOR-209ENST00000540664 MIER1Q8N108 512 aa13.83□□□□□ -0.2
LCOR-209ENST00000540664 DENND4BO75064 1496 aaPredicted RBP13.82□□□□□ -0.2
LCOR-209ENST00000540664 ATP10BO94823 1461 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms