RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 CLASP1Q7Z460 1538 aa15.08■□□□□ 0.01
PAAF1-209ENST00000540659 CHMP7Q8WUX9 453 aaPredicted RBP15.07■□□□□ 0
PAAF1-209ENST00000540659 CLIP1P30622 1438 aa15.07■□□□□ 0
PAAF1-209ENST00000540659 GRIN2AQ12879 1464 aa15.07■□□□□ 0
PAAF1-209ENST00000540659 FHAD1B1AJZ9 1412 aa15.06■□□□□ 0
PAAF1-209ENST00000540659 RIMBP3CA6NJZ7 1639 aa15.05■□□□□ -0
PAAF1-209ENST00000540659 RIMBP3BA6NNM3 1639 aa15.05■□□□□ -0
PAAF1-209ENST00000540659 RIMBP3Q9UFD9 1639 aa15.05■□□□□ -0
PAAF1-209ENST00000540659 CEP170Q5SW79 1584 aa15.02■□□□□ -0
PAAF1-209ENST00000540659 ARHGEF11O15085 1522 aa15.02■□□□□ -0
PAAF1-209ENST00000540659 PPARGC1BQ86YN6 1023 aaKnown RBP15.02■□□□□ -0
PAAF1-209ENST00000540659 CTTNBP2Q8WZ74 1663 aa15.02□□□□□ -0.01
PAAF1-209ENST00000540659 PCGF6Q9BYE7 350 aa15□□□□□ -0.01
PAAF1-209ENST00000540659 NUP160Q12769 1436 aa14.99□□□□□ -0.01
PAAF1-209ENST00000540659 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
PAAF1-209ENST00000540659 TRIM26Q12899 539 aaPredicted RBP14.93□□□□□ -0.02
PAAF1-209ENST00000540659 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
PAAF1-209ENST00000540659 SHROOM2Q13796 1616 aa14.92□□□□□ -0.02
PAAF1-209ENST00000540659 TTBK1Q5TCY1 1321 aaPredicted RBP14.92□□□□□ -0.02
PAAF1-209ENST00000540659 ARHGAP35Q9NRY4 1499 aa14.91□□□□□ -0.02
PAAF1-209ENST00000540659 ERCC6L2Q5T890 1561 aa14.87□□□□□ -0.03
PAAF1-209ENST00000540659 P3H3Q8IVL6 736 aa14.83□□□□□ -0.04
PAAF1-209ENST00000540659 KIAA0586Q9BVV6 1533 aa14.82□□□□□ -0.04
PAAF1-209ENST00000540659 APLP2Q06481 763 aa14.82□□□□□ -0.04
PAAF1-209ENST00000540659 EFCAB5A4FU69 1503 aa14.81□□□□□ -0.04
PAAF1-209ENST00000540659 IQGAP2Q13576 1575 aa14.8□□□□□ -0.04
PAAF1-209ENST00000540659 PRG4Q92954 1404 aaPredicted RBP14.79□□□□□ -0.04
PAAF1-209ENST00000540659 FHOD3Q2V2M9 1422 aa14.78□□□□□ -0.04
PAAF1-209ENST00000540659 CYB5RLQ6IPT4 315 aa14.78□□□□□ -0.04
PAAF1-209ENST00000540659 SAMD9Q5K651 1589 aa14.77□□□□□ -0.04
PAAF1-209ENST00000540659 PCF11O94913 1555 aaKnown RBP14.76□□□□□ -0.05
PAAF1-209ENST00000540659 JPH4Q96JJ6 628 aa14.75□□□□□ -0.05
PAAF1-209ENST00000540659 ATP1B4Q9UN42 357 aaPredicted RBP14.71□□□□□ -0.05
PAAF1-209ENST00000540659 UGGT2Q9NYU1 1516 aa14.7□□□□□ -0.06
PAAF1-209ENST00000540659 CFAP43Q8NDM7 1665 aa14.69□□□□□ -0.06
PAAF1-209ENST00000540659 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
PAAF1-209ENST00000540659 DISP1Q96F81 1524 aa14.67□□□□□ -0.06
PAAF1-209ENST00000540659 KIAA0556O60303 1618 aa14.67□□□□□ -0.06
PAAF1-209ENST00000540659 KANK4Q5T7N3 995 aaPredicted RBP14.66□□□□□ -0.06
PAAF1-209ENST00000540659 LRRIQ1Q96JM4 1722 aa14.66□□□□□ -0.06
PAAF1-209ENST00000540659 FMN1Q68DA7 1419 aa14.66□□□□□ -0.06
PAAF1-209ENST00000540659 FYCO1Q9BQS8 1478 aa14.65□□□□□ -0.06
PAAF1-209ENST00000540659 CARMIL2Q6F5E8 1435 aa14.65□□□□□ -0.06
PAAF1-209ENST00000540659 ADCY10Q96PN6 1610 aa14.63□□□□□ -0.07
PAAF1-209ENST00000540659 CASKIN1Q8WXD9 1431 aa14.63□□□□□ -0.07
PAAF1-209ENST00000540659 MAP3K1Q13233 1512 aa14.61□□□□□ -0.07
PAAF1-209ENST00000540659 PTPRGP23470 1445 aa14.58□□□□□ -0.07
PAAF1-209ENST00000540659 LRRC9Q6ZRR7 1453 aa14.58□□□□□ -0.08
PAAF1-209ENST00000540659 HECW1Q76N89 1606 aa14.58□□□□□ -0.08
PAAF1-209ENST00000540659 HRCP23327 699 aa14.55□□□□□ -0.08
PAAF1-209ENST00000540659 ABCC2Q92887 1545 aa14.53□□□□□ -0.08
PAAF1-209ENST00000540659 RAPGEF6Q8TEU7 1601 aa14.52□□□□□ -0.08
PAAF1-209ENST00000540659 UHRF1BP1LA0JNW5 1464 aa14.51□□□□□ -0.09
PAAF1-209ENST00000540659 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
PAAF1-209ENST00000540659 MAPKBP1O60336 1514 aa14.51□□□□□ -0.09
PAAF1-209ENST00000540659 UACAQ9BZF9 1416 aa14.5□□□□□ -0.09
PAAF1-209ENST00000540659 CCDC18Q5T9S5 1454 aa14.5□□□□□ -0.09
PAAF1-209ENST00000540659 ARID3CA6NKF2 412 aa14.49□□□□□ -0.09
PAAF1-209ENST00000540659 KIF13AQ9H1H9 1805 aa14.49□□□□□ -0.09
PAAF1-209ENST00000540659 CDK13Q14004 1512 aaKnown RBP14.49□□□□□ -0.09
PAAF1-209ENST00000540659 PLB1Q6P1J6 1458 aa14.49□□□□□ -0.09
PAAF1-209ENST00000540659 ABCA8O94911 1581 aa14.48□□□□□ -0.09
PAAF1-209ENST00000540659 TRHP20396 242 aaPredicted RBP14.48□□□□□ -0.09
PAAF1-209ENST00000540659 EPRSP07814 1512 aaKnown RBP14.47□□□□□ -0.09
PAAF1-209ENST00000540659 SUPT6HQ7KZ85 1726 aaKnown RBP14.47□□□□□ -0.09
PAAF1-209ENST00000540659 ZCCHC11Q5TAX3 1644 aaKnown RBP14.47□□□□□ -0.09
PAAF1-209ENST00000540659 RRBP1Q9P2E9 1410 aaKnown RBP14.47□□□□□ -0.09
PAAF1-209ENST00000540659 MTUS2Q5JR59 1369 aa14.47□□□□□ -0.09
PAAF1-209ENST00000540659 EHBP1L1Q8N3D4 1523 aa14.46□□□□□ -0.09
PAAF1-209ENST00000540659 PHLDB1Q86UU1 1377 aa14.46□□□□□ -0.1
PAAF1-209ENST00000540659 MAGI3Q5TCQ9 1506 aa14.46□□□□□ -0.1
PAAF1-209ENST00000540659 DIP2BQ9P265 1576 aa14.45□□□□□ -0.1
PAAF1-209ENST00000540659 KDM5BQ9UGL1 1544 aa14.45□□□□□ -0.1
PAAF1-209ENST00000540659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
PAAF1-209ENST00000540659 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
PAAF1-209ENST00000540659 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
PAAF1-209ENST00000540659 NUP153P49790 1475 aaKnown RBP14.42□□□□□ -0.1
PAAF1-209ENST00000540659 ABCC10Q5T3U5 1492 aa14.41□□□□□ -0.1
PAAF1-209ENST00000540659 NCOA2Q15596 1464 aa14.4□□□□□ -0.1
PAAF1-209ENST00000540659 ITGAEP38570 1179 aa14.4□□□□□ -0.1
PAAF1-209ENST00000540659 ASXL2Q76L83 1435 aa14.4□□□□□ -0.1
PAAF1-209ENST00000540659 CCER1Q8TC90 406 aaPredicted RBP14.39□□□□□ -0.11
PAAF1-209ENST00000540659 FAM50AQ14320 339 aaKnown RBP14.38□□□□□ -0.11
PAAF1-209ENST00000540659 WDR7Q9Y4E6 1490 aa14.34□□□□□ -0.11
PAAF1-209ENST00000540659 TSPOAP1O95153 1857 aa14.33□□□□□ -0.11
PAAF1-209ENST00000540659 FGD6Q6ZV73 1430 aa14.33□□□□□ -0.11
PAAF1-209ENST00000540659 ZEB1P37275 1124 aaPredicted RBP14.33□□□□□ -0.12
PAAF1-209ENST00000540659 GLI2P10070 1586 aa14.33□□□□□ -0.12
PAAF1-209ENST00000540659 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.12
PAAF1-209ENST00000540659 MYOM3Q5VTT5 1437 aa14.32□□□□□ -0.12
PAAF1-209ENST00000540659 ATP10BO94823 1461 aa14.32□□□□□ -0.12
PAAF1-209ENST00000540659 FAM69CQ0P6D2 419 aa14.32□□□□□ -0.12
PAAF1-209ENST00000540659 CDK11AQ9UQ88 783 aaPredicted RBP14.32□□□□□ -0.12
PAAF1-209ENST00000540659 PPRC1Q5VV67 1664 aaKnown RBP14.3□□□□□ -0.12
PAAF1-209ENST00000540659 KIF14Q15058 1648 aa14.3□□□□□ -0.12
PAAF1-209ENST00000540659 MAP3K4Q9Y6R4 1608 aa14.3□□□□□ -0.12
PAAF1-209ENST00000540659 TROQ12816 1431 aaPredicted RBP14.27□□□□□ -0.12
PAAF1-209ENST00000540659 ITSN2Q9NZM3 1697 aa14.26□□□□□ -0.13
PAAF1-209ENST00000540659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.25□□□□□ -0.13
PAAF1-209ENST00000540659 TCOF1Q13428 1488 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms