RNA–Protein interactions for RNA: ENST00000540156.1

KDM5A-205, Transcript of lysine demethylase 5A, humanhuman

TSL 3

Gene KDM5A, Length 516 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-205ENST00000540156 NUP160Q12769 1436 aa12.11□□□□□ -0.47
KDM5A-205ENST00000540156 ABCA5Q8WWZ7 1642 aa12.08□□□□□ -0.48
KDM5A-205ENST00000540156 PRG4Q92954 1404 aaPredicted RBP12.08□□□□□ -0.48
KDM5A-205ENST00000540156 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.48
KDM5A-205ENST00000540156 ADAMTS12P58397 1594 aa12.05□□□□□ -0.48
KDM5A-205ENST00000540156 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
KDM5A-205ENST00000540156 JPH4Q96JJ6 628 aa12.03□□□□□ -0.48
KDM5A-205ENST00000540156 ADCY10Q96PN6 1610 aa12.03□□□□□ -0.48
KDM5A-205ENST00000540156 SOCS7O14512 581 aa11.98□□□□□ -0.49
KDM5A-205ENST00000540156 FHAD1B1AJZ9 1412 aa11.97□□□□□ -0.49
KDM5A-205ENST00000540156 ILDR2Q71H61 639 aa11.97□□□□□ -0.49
KDM5A-205ENST00000540156 PPRC1Q5VV67 1664 aaKnown RBP11.97□□□□□ -0.49
KDM5A-205ENST00000540156 COL17A1Q9UMD9 1497 aaPredicted RBP11.94□□□□□ -0.5
KDM5A-205ENST00000540156 TOP2BQ02880 1626 aa11.9□□□□□ -0.5
KDM5A-205ENST00000540156 DISP3Q9P2K9 1392 aa11.9□□□□□ -0.5
KDM5A-205ENST00000540156 RUSC2Q8N2Y8 1516 aa11.88□□□□□ -0.51
KDM5A-205ENST00000540156 GLI2P10070 1586 aa11.88□□□□□ -0.51
KDM5A-205ENST00000540156 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
KDM5A-205ENST00000540156 ERICH3Q5RHP9 1530 aa11.86□□□□□ -0.51
KDM5A-205ENST00000540156 TTBK1Q5TCY1 1321 aaPredicted RBP11.86□□□□□ -0.51
KDM5A-205ENST00000540156 ASXL2Q76L83 1435 aa11.85□□□□□ -0.51
KDM5A-205ENST00000540156 PLB1Q6P1J6 1458 aa11.83□□□□□ -0.52
KDM5A-205ENST00000540156 CUL7Q14999 1698 aa11.81□□□□□ -0.52
KDM5A-205ENST00000540156 ABCC2Q92887 1545 aa11.81□□□□□ -0.52
KDM5A-205ENST00000540156 PTPRGP23470 1445 aa11.8□□□□□ -0.52
KDM5A-205ENST00000540156 MAP3K4Q9Y6R4 1608 aa11.8□□□□□ -0.52
KDM5A-205ENST00000540156 TEX14Q8IWB6 1497 aa11.8□□□□□ -0.52
KDM5A-205ENST00000540156 EPRSP07814 1512 aaKnown RBP11.77□□□□□ -0.52
KDM5A-205ENST00000540156 KIF21BO75037 1637 aa11.77□□□□□ -0.53
KDM5A-205ENST00000540156 CERKQ8TCT0 537 aa11.76□□□□□ -0.53
KDM5A-205ENST00000540156 KIAA0586Q9BVV6 1533 aa11.76□□□□□ -0.53
KDM5A-205ENST00000540156 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
KDM5A-205ENST00000540156 PTPRMP28827 1452 aa11.74□□□□□ -0.53
KDM5A-205ENST00000540156 PCF11O94913 1555 aaKnown RBP11.72□□□□□ -0.53
KDM5A-205ENST00000540156 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.53
KDM5A-205ENST00000540156 SPATA31D1Q6ZQQ2 1576 aa11.71□□□□□ -0.54
KDM5A-205ENST00000540156 ADAMTSL3P82987 1691 aa11.69□□□□□ -0.54
KDM5A-205ENST00000540156 UHRF1BP1LA0JNW5 1464 aa11.69□□□□□ -0.54
KDM5A-205ENST00000540156 UACAQ9BZF9 1416 aa11.68□□□□□ -0.54
KDM5A-205ENST00000540156 HSPA2P54652 639 aa11.67□□□□□ -0.54
KDM5A-205ENST00000540156 CARMIL2Q6F5E8 1435 aa11.67□□□□□ -0.54
KDM5A-205ENST00000540156 ZCCHC11Q5TAX3 1644 aaKnown RBP11.67□□□□□ -0.54
KDM5A-205ENST00000540156 KDM5BQ9UGL1 1544 aa11.65□□□□□ -0.54
KDM5A-205ENST00000540156 CD109Q6YHK3 1445 aa11.63□□□□□ -0.55
KDM5A-205ENST00000540156 MAGI3Q5TCQ9 1506 aa11.62□□□□□ -0.55
KDM5A-205ENST00000540156 MADDQ8WXG6 1647 aa11.62□□□□□ -0.55
KDM5A-205ENST00000540156 CFAP43Q8NDM7 1665 aa11.62□□□□□ -0.55
KDM5A-205ENST00000540156 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
KDM5A-205ENST00000540156 WDR7Q9Y4E6 1490 aa11.61□□□□□ -0.55
KDM5A-205ENST00000540156 BCORL1Q5H9F3 1711 aa11.6□□□□□ -0.55
KDM5A-205ENST00000540156 PLPPR3Q6T4P5 718 aa11.6□□□□□ -0.55
KDM5A-205ENST00000540156 IGF1RP08069 1367 aa11.59□□□□□ -0.55
KDM5A-205ENST00000540156 ARID4BQ4LE39 1312 aaPredicted RBP11.59□□□□□ -0.55
KDM5A-205ENST00000540156 RIMS1Q86UR5 1692 aaKnown RBP11.59□□□□□ -0.55
KDM5A-205ENST00000540156 IQGAP2Q13576 1575 aa11.56□□□□□ -0.56
KDM5A-205ENST00000540156 ARAP3Q8WWN8 1544 aa11.55□□□□□ -0.56
KDM5A-205ENST00000540156 DISP1Q96F81 1524 aa11.55□□□□□ -0.56
KDM5A-205ENST00000540156 RAPGEF3O95398 923 aa11.53□□□□□ -0.56
KDM5A-205ENST00000540156 CARMIL1Q5VZK9 1371 aa11.5□□□□□ -0.57
KDM5A-205ENST00000540156 KIF27Q86VH2 1401 aa11.49□□□□□ -0.57
KDM5A-205ENST00000540156 CHIC1Q5VXU3 224 aa11.47□□□□□ -0.57
KDM5A-205ENST00000540156 KIAA0556O60303 1618 aa11.46□□□□□ -0.57
KDM5A-205ENST00000540156 DMRT2Q9Y5R5 561 aa11.45□□□□□ -0.58
KDM5A-205ENST00000540156 STRCQ7RTU9 1775 aa11.45□□□□□ -0.58
KDM5A-205ENST00000540156 UGGT2Q9NYU1 1516 aa11.45□□□□□ -0.58
KDM5A-205ENST00000540156 PHLDB1Q86UU1 1377 aa11.44□□□□□ -0.58
KDM5A-205ENST00000540156 YEATS2Q9ULM3 1422 aa11.43□□□□□ -0.58
KDM5A-205ENST00000540156 FRMPD1Q5SYB0 1578 aa11.43□□□□□ -0.58
KDM5A-205ENST00000540156 PREX1Q8TCU6 1659 aa11.41□□□□□ -0.58
KDM5A-205ENST00000540156 MLECQ14165 292 aa11.41□□□□□ -0.58
KDM5A-205ENST00000540156 ARID3CA6NKF2 412 aa11.4□□□□□ -0.58
KDM5A-205ENST00000540156 FER1L4A9Z1Z3 1794 aa11.4□□□□□ -0.58
KDM5A-205ENST00000540156 POGZQ7Z3K3 1410 aa11.4□□□□□ -0.58
KDM5A-205ENST00000540156 ABCA8O94911 1581 aa11.4□□□□□ -0.58
KDM5A-205ENST00000540156 ARHGEF40Q8TER5 1519 aa11.4□□□□□ -0.59
KDM5A-205ENST00000540156 ABCA9Q8IUA7 1624 aa11.38□□□□□ -0.59
KDM5A-205ENST00000540156 NEO1Q92859 1461 aa11.38□□□□□ -0.59
KDM5A-205ENST00000540156 SIGLEC1Q9BZZ2 1709 aa11.38□□□□□ -0.59
KDM5A-205ENST00000540156 SUPT5HO00267 1087 aaKnown RBP11.38□□□□□ -0.59
KDM5A-205ENST00000540156 FANCAO15360 1455 aa11.38□□□□□ -0.59
KDM5A-205ENST00000540156 LTBP4Q8N2S1 1624 aa11.37□□□□□ -0.59
KDM5A-205ENST00000540156 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
KDM5A-205ENST00000540156 CEBPAP49715 358 aaPredicted RBP11.36□□□□□ -0.59
KDM5A-205ENST00000540156 IQSEC2Q5JU85 1478 aa11.35□□□□□ -0.59
KDM5A-205ENST00000540156 RICTORQ6R327 1708 aa11.35□□□□□ -0.59
KDM5A-205ENST00000540156 SETD1BQ9UPS6 1966 aaKnown RBP11.34□□□□□ -0.59
KDM5A-205ENST00000540156 PTPRTO14522 1441 aa11.34□□□□□ -0.59
KDM5A-205ENST00000540156 AKNAQ7Z591 1439 aa11.34□□□□□ -0.59
KDM5A-205ENST00000540156 UBAP1LF5GYI3 381 aa11.33□□□□□ -0.6
KDM5A-205ENST00000540156 DENND4BO75064 1496 aaPredicted RBP11.32□□□□□ -0.6
KDM5A-205ENST00000540156 ATP10BO94823 1461 aa11.32□□□□□ -0.6
KDM5A-205ENST00000540156 MED1Q15648 1581 aaPredicted RBP11.31□□□□□ -0.6
KDM5A-205ENST00000540156 RAPGEF2Q9Y4G8 1499 aa11.31□□□□□ -0.6
KDM5A-205ENST00000540156 UHRF1BP1Q6BDS2 1440 aa11.3□□□□□ -0.6
KDM5A-205ENST00000540156 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
KDM5A-205ENST00000540156 FHOD3Q2V2M9 1422 aa11.29□□□□□ -0.6
KDM5A-205ENST00000540156 GOLGA3Q08378 1498 aa11.29□□□□□ -0.6
KDM5A-205ENST00000540156 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.6
KDM5A-205ENST00000540156 EFCAB5A4FU69 1503 aa11.27□□□□□ -0.61
KDM5A-205ENST00000540156 ARHGEF12Q9NZN5 1544 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms