RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 MAGI1Q96QZ7 1491 aaPredicted RBP16.31■□□□□ 0.2
PABPC1P4-201ENST00000539977 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
PABPC1P4-201ENST00000539977 ARHGAP35Q9NRY4 1499 aa16.28■□□□□ 0.2
PABPC1P4-201ENST00000539977 GRIN2AQ12879 1464 aa16.28■□□□□ 0.2
PABPC1P4-201ENST00000539977 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
PABPC1P4-201ENST00000539977 TTBK1Q5TCY1 1321 aaPredicted RBP16.26■□□□□ 0.19
PABPC1P4-201ENST00000539977 VPS8Q8N3P4 1428 aa16.23■□□□□ 0.19
PABPC1P4-201ENST00000539977 FHOD3Q2V2M9 1422 aa16.21■□□□□ 0.19
PABPC1P4-201ENST00000539977 CTTNBP2Q8WZ74 1663 aa16.2■□□□□ 0.18
PABPC1P4-201ENST00000539977 KIAA0586Q9BVV6 1533 aa16.17■□□□□ 0.18
PABPC1P4-201ENST00000539977 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
PABPC1P4-201ENST00000539977 IQGAP2Q13576 1575 aa16.16■□□□□ 0.18
PABPC1P4-201ENST00000539977 ATP1B4Q9UN42 357 aaPredicted RBP16.16■□□□□ 0.18
PABPC1P4-201ENST00000539977 NUP160Q12769 1436 aa16.15■□□□□ 0.18
PABPC1P4-201ENST00000539977 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
PABPC1P4-201ENST00000539977 APLP2Q06481 763 aa16.14■□□□□ 0.17
PABPC1P4-201ENST00000539977 JPH4Q96JJ6 628 aa16.12■□□□□ 0.17
PABPC1P4-201ENST00000539977 EFCAB5A4FU69 1503 aa16.12■□□□□ 0.17
PABPC1P4-201ENST00000539977 SAMD9Q5K651 1589 aa16.08■□□□□ 0.16
PABPC1P4-201ENST00000539977 CHD1O14646 1710 aa16.08■□□□□ 0.16
PABPC1P4-201ENST00000539977 UGGT2Q9NYU1 1516 aa16.07■□□□□ 0.16
PABPC1P4-201ENST00000539977 TRIM26Q12899 539 aaPredicted RBP16.07■□□□□ 0.16
PABPC1P4-201ENST00000539977 KANK4Q5T7N3 995 aaPredicted RBP16.07■□□□□ 0.16
PABPC1P4-201ENST00000539977 DISP1Q96F81 1524 aa16.06■□□□□ 0.16
PABPC1P4-201ENST00000539977 FMN1Q68DA7 1419 aa16.04■□□□□ 0.16
PABPC1P4-201ENST00000539977 ARID3CA6NKF2 412 aa16.02■□□□□ 0.16
PABPC1P4-201ENST00000539977 PCF11O94913 1555 aaKnown RBP16.01■□□□□ 0.15
PABPC1P4-201ENST00000539977 CASKIN1Q8WXD9 1431 aa16■□□□□ 0.15
PABPC1P4-201ENST00000539977 PRG4Q92954 1404 aaPredicted RBP16■□□□□ 0.15
PABPC1P4-201ENST00000539977 KIAA0556O60303 1618 aa16■□□□□ 0.15
PABPC1P4-201ENST00000539977 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
PABPC1P4-201ENST00000539977 FYCO1Q9BQS8 1478 aa15.96■□□□□ 0.15
PABPC1P4-201ENST00000539977 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
PABPC1P4-201ENST00000539977 TIAM1Q13009 1591 aa15.91■□□□□ 0.14
PABPC1P4-201ENST00000539977 CLASP1Q7Z460 1538 aa15.91■□□□□ 0.14
PABPC1P4-201ENST00000539977 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
PABPC1P4-201ENST00000539977 PLB1Q6P1J6 1458 aa15.91■□□□□ 0.14
PABPC1P4-201ENST00000539977 PTPRGP23470 1445 aa15.89■□□□□ 0.13
PABPC1P4-201ENST00000539977 LRRC9Q6ZRR7 1453 aa15.89■□□□□ 0.13
PABPC1P4-201ENST00000539977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
PABPC1P4-201ENST00000539977 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
PABPC1P4-201ENST00000539977 MAP3K1Q13233 1512 aa15.87■□□□□ 0.13
PABPC1P4-201ENST00000539977 SHROOM2Q13796 1616 aa15.86■□□□□ 0.13
PABPC1P4-201ENST00000539977 CDK13Q14004 1512 aaKnown RBP15.86■□□□□ 0.13
PABPC1P4-201ENST00000539977 MTUS2Q5JR59 1369 aa15.85■□□□□ 0.13
PABPC1P4-201ENST00000539977 EPRSP07814 1512 aaKnown RBP15.85■□□□□ 0.13
PABPC1P4-201ENST00000539977 NUP153P49790 1475 aaKnown RBP15.85■□□□□ 0.13
PABPC1P4-201ENST00000539977 HECW1Q76N89 1606 aa15.83■□□□□ 0.12
PABPC1P4-201ENST00000539977 LRRIQ1Q96JM4 1722 aa15.82■□□□□ 0.12
PABPC1P4-201ENST00000539977 RAPGEF6Q8TEU7 1601 aa15.81■□□□□ 0.12
PABPC1P4-201ENST00000539977 CFAP43Q8NDM7 1665 aa15.81■□□□□ 0.12
PABPC1P4-201ENST00000539977 PHLDB1Q86UU1 1377 aa15.8■□□□□ 0.12
PABPC1P4-201ENST00000539977 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
PABPC1P4-201ENST00000539977 MAGI3Q5TCQ9 1506 aa15.79■□□□□ 0.12
PABPC1P4-201ENST00000539977 ABCA8O94911 1581 aa15.77■□□□□ 0.12
PABPC1P4-201ENST00000539977 UACAQ9BZF9 1416 aa15.76■□□□□ 0.11
PABPC1P4-201ENST00000539977 CDK11AQ9UQ88 783 aaPredicted RBP15.74■□□□□ 0.11
PABPC1P4-201ENST00000539977 ATP10BO94823 1461 aa15.74■□□□□ 0.11
PABPC1P4-201ENST00000539977 ITGAEP38570 1179 aa15.74■□□□□ 0.11
PABPC1P4-201ENST00000539977 NCOA2Q15596 1464 aa15.72■□□□□ 0.11
PABPC1P4-201ENST00000539977 FAM50AQ14320 339 aaKnown RBP15.72■□□□□ 0.11
PABPC1P4-201ENST00000539977 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
PABPC1P4-201ENST00000539977 RRBP1Q9P2E9 1410 aaKnown RBP15.71■□□□□ 0.11
PABPC1P4-201ENST00000539977 EHBP1L1Q8N3D4 1523 aa15.71■□□□□ 0.11
PABPC1P4-201ENST00000539977 PLEKHD1A6NEE1 506 aa15.71■□□□□ 0.11
PABPC1P4-201ENST00000539977 ABCC2Q92887 1545 aa15.67■□□□□ 0.1
PABPC1P4-201ENST00000539977 TROQ12816 1431 aaPredicted RBP15.67■□□□□ 0.1
PABPC1P4-201ENST00000539977 MYOM3Q5VTT5 1437 aa15.64■□□□□ 0.09
PABPC1P4-201ENST00000539977 FGD6Q6ZV73 1430 aa15.64■□□□□ 0.09
PABPC1P4-201ENST00000539977 SUPT6HQ7KZ85 1726 aaKnown RBP15.64■□□□□ 0.09
PABPC1P4-201ENST00000539977 KCNH8Q96L42 1107 aa15.63■□□□□ 0.09
PABPC1P4-201ENST00000539977 ARHGEF11O15085 1522 aa15.63■□□□□ 0.09
PABPC1P4-201ENST00000539977 CYB5RLQ6IPT4 315 aa15.61■□□□□ 0.09
PABPC1P4-201ENST00000539977 UHRF1BP1LA0JNW5 1464 aa15.61■□□□□ 0.09
PABPC1P4-201ENST00000539977 KIF14Q15058 1648 aa15.6■□□□□ 0.09
PABPC1P4-201ENST00000539977 ZNF644Q9H582 1327 aaPredicted RBP15.59■□□□□ 0.09
PABPC1P4-201ENST00000539977 ADCY10Q96PN6 1610 aa15.58■□□□□ 0.09
PABPC1P4-201ENST00000539977 KDM5BQ9UGL1 1544 aa15.58■□□□□ 0.09
PABPC1P4-201ENST00000539977 ZNF777Q9ULD5 760 aaPredicted RBP15.58■□□□□ 0.08
PABPC1P4-201ENST00000539977 CFDP1Q9UEE9 299 aaPredicted RBP15.57■□□□□ 0.08
PABPC1P4-201ENST00000539977 ZCCHC11Q5TAX3 1644 aaKnown RBP15.55■□□□□ 0.08
PABPC1P4-201ENST00000539977 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
PABPC1P4-201ENST00000539977 GPATCH8Q9UKJ3 1502 aaKnown RBP15.54■□□□□ 0.08
PABPC1P4-201ENST00000539977 ABCC10Q5T3U5 1492 aa15.52■□□□□ 0.08
PABPC1P4-201ENST00000539977 MIA2Q96PC5 1412 aa15.52■□□□□ 0.08
PABPC1P4-201ENST00000539977 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.52■□□□□ 0.07
PABPC1P4-201ENST00000539977 CCER1Q8TC90 406 aaPredicted RBP15.52■□□□□ 0.07
PABPC1P4-201ENST00000539977 CHIC2Q9UKJ5 165 aa15.52■□□□□ 0.07
PABPC1P4-201ENST00000539977 PTPN23Q9H3S7 1636 aa15.52■□□□□ 0.07
PABPC1P4-201ENST00000539977 PTPRKQ15262 1439 aa15.51■□□□□ 0.07
PABPC1P4-201ENST00000539977 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
PABPC1P4-201ENST00000539977 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
PABPC1P4-201ENST00000539977 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
PABPC1P4-201ENST00000539977 HRCP23327 699 aa15.5■□□□□ 0.07
PABPC1P4-201ENST00000539977 ASXL2Q76L83 1435 aa15.48■□□□□ 0.07
PABPC1P4-201ENST00000539977 TCOF1Q13428 1488 aaKnown RBP15.48■□□□□ 0.07
PABPC1P4-201ENST00000539977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.47■□□□□ 0.07
PABPC1P4-201ENST00000539977 WDR7Q9Y4E6 1490 aa15.46■□□□□ 0.07
PABPC1P4-201ENST00000539977 TTC37Q6PGP7 1564 aa15.45■□□□□ 0.06
PABPC1P4-201ENST00000539977 RRP7BPQ9NSQ0 103 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms