RNA–Protein interactions for RNA: ENST00000539885.1

NCAPD2-209, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 3

Gene NCAPD2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-209ENST00000539885 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
NCAPD2-209ENST00000539885 KIAA0586Q9BVV6 1533 aa19.08■□□□□ 0.64
NCAPD2-209ENST00000539885 RAPGEF2Q9Y4G8 1499 aa19.03■□□□□ 0.64
NCAPD2-209ENST00000539885 PRG4Q92954 1404 aaPredicted RBP19.02■□□□□ 0.64
NCAPD2-209ENST00000539885 JPH4Q96JJ6 628 aa19.02■□□□□ 0.64
NCAPD2-209ENST00000539885 ERCC6L2Q5T890 1561 aa19.01■□□□□ 0.63
NCAPD2-209ENST00000539885 EEA1Q15075 1411 aa18.97■□□□□ 0.63
NCAPD2-209ENST00000539885 ILDR1Q86SU0 546 aaPredicted RBP18.95■□□□□ 0.62
NCAPD2-209ENST00000539885 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
NCAPD2-209ENST00000539885 IQGAP2Q13576 1575 aa18.94■□□□□ 0.62
NCAPD2-209ENST00000539885 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
NCAPD2-209ENST00000539885 CSRNP3Q8WYN3 585 aa18.86■□□□□ 0.61
NCAPD2-209ENST00000539885 UGGT2Q9NYU1 1516 aa18.85■□□□□ 0.61
NCAPD2-209ENST00000539885 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
NCAPD2-209ENST00000539885 TNIKQ9UKE5 1360 aa18.81■□□□□ 0.6
NCAPD2-209ENST00000539885 CTTNBP2Q8WZ74 1663 aa18.81■□□□□ 0.6
NCAPD2-209ENST00000539885 DISP1Q96F81 1524 aa18.79■□□□□ 0.6
NCAPD2-209ENST00000539885 PTPRGP23470 1445 aa18.79■□□□□ 0.6
NCAPD2-209ENST00000539885 GOLGA3Q08378 1498 aa18.77■□□□□ 0.59
NCAPD2-209ENST00000539885 KIAA0556O60303 1618 aa18.75■□□□□ 0.59
NCAPD2-209ENST00000539885 ADCY10Q96PN6 1610 aa18.73■□□□□ 0.59
NCAPD2-209ENST00000539885 KIF21BO75037 1637 aa18.72■□□□□ 0.59
NCAPD2-209ENST00000539885 NPM1P06748 294 aaKnown RBP eCLIP18.7■□□□□ 0.58
NCAPD2-209ENST00000539885 UHRF1BP1LA0JNW5 1464 aa18.7■□□□□ 0.58
NCAPD2-209ENST00000539885 MAPKBP1O60336 1514 aa18.69■□□□□ 0.58
NCAPD2-209ENST00000539885 UACAQ9BZF9 1416 aa18.67■□□□□ 0.58
NCAPD2-209ENST00000539885 FAM9AQ8IZU1 332 aaPredicted RBP18.67■□□□□ 0.58
NCAPD2-209ENST00000539885 ABCC2Q92887 1545 aa18.66■□□□□ 0.58
NCAPD2-209ENST00000539885 TTBK1Q5TCY1 1321 aaPredicted RBP18.61■□□□□ 0.57
NCAPD2-209ENST00000539885 SAMD9Q5K651 1589 aa18.6■□□□□ 0.57
NCAPD2-209ENST00000539885 ABCC10Q5T3U5 1492 aa18.6■□□□□ 0.57
NCAPD2-209ENST00000539885 KDM5BQ9UGL1 1544 aa18.59■□□□□ 0.57
NCAPD2-209ENST00000539885 PLB1Q6P1J6 1458 aa18.56■□□□□ 0.56
NCAPD2-209ENST00000539885 ABCA8O94911 1581 aa18.55■□□□□ 0.56
NCAPD2-209ENST00000539885 EFCAB5A4FU69 1503 aa18.55■□□□□ 0.56
NCAPD2-209ENST00000539885 DIP2BQ9P265 1576 aa18.55■□□□□ 0.56
NCAPD2-209ENST00000539885 ASXL2Q76L83 1435 aa18.52■□□□□ 0.56
NCAPD2-209ENST00000539885 KIF13AQ9H1H9 1805 aa18.51■□□□□ 0.55
NCAPD2-209ENST00000539885 FAM69CQ0P6D2 419 aa18.5■□□□□ 0.55
NCAPD2-209ENST00000539885 ZCCHC11Q5TAX3 1644 aaKnown RBP18.49■□□□□ 0.55
NCAPD2-209ENST00000539885 UBTFP17480 764 aaKnown RBP18.49■□□□□ 0.55
NCAPD2-209ENST00000539885 GLI2P10070 1586 aa18.47■□□□□ 0.55
NCAPD2-209ENST00000539885 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
NCAPD2-209ENST00000539885 FHOD3Q2V2M9 1422 aa18.45■□□□□ 0.54
NCAPD2-209ENST00000539885 WDR7Q9Y4E6 1490 aa18.45■□□□□ 0.54
NCAPD2-209ENST00000539885 EPRSP07814 1512 aaKnown RBP18.43■□□□□ 0.54
NCAPD2-209ENST00000539885 RAPGEF6Q8TEU7 1601 aa18.42■□□□□ 0.54
NCAPD2-209ENST00000539885 KDM4FA0A1W2PPD8 638 aa18.41■□□□□ 0.54
NCAPD2-209ENST00000539885 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
NCAPD2-209ENST00000539885 ATP10BO94823 1461 aa18.38■□□□□ 0.53
NCAPD2-209ENST00000539885 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
NCAPD2-209ENST00000539885 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
NCAPD2-209ENST00000539885 FMN1Q68DA7 1419 aa18.37■□□□□ 0.53
NCAPD2-209ENST00000539885 NUP153P49790 1475 aaKnown RBP18.37■□□□□ 0.53
NCAPD2-209ENST00000539885 MAP3K4Q9Y6R4 1608 aa18.34■□□□□ 0.53
NCAPD2-209ENST00000539885 TEX14Q8IWB6 1497 aa18.32■□□□□ 0.52
NCAPD2-209ENST00000539885 PPRC1Q5VV67 1664 aaKnown RBP18.28■□□□□ 0.52
NCAPD2-209ENST00000539885 CFAP43Q8NDM7 1665 aa18.28■□□□□ 0.52
NCAPD2-209ENST00000539885 HECW1Q76N89 1606 aa18.27■□□□□ 0.52
NCAPD2-209ENST00000539885 ARID3CA6NKF2 412 aa18.27■□□□□ 0.52
NCAPD2-209ENST00000539885 MAGI3Q5TCQ9 1506 aa18.27■□□□□ 0.51
NCAPD2-209ENST00000539885 KDM6BO15054 1643 aa18.27■□□□□ 0.51
NCAPD2-209ENST00000539885 CLIP1P30622 1438 aa18.25■□□□□ 0.51
NCAPD2-209ENST00000539885 CD109Q6YHK3 1445 aa18.25■□□□□ 0.51
NCAPD2-209ENST00000539885 TSPOAP1O95153 1857 aa18.25■□□□□ 0.51
NCAPD2-209ENST00000539885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
NCAPD2-209ENST00000539885 HNRNPUL2Q1KMD3 747 aaKnown RBP18.25■□□□□ 0.51
NCAPD2-209ENST00000539885 KCNH8Q96L42 1107 aa18.24■□□□□ 0.51
NCAPD2-209ENST00000539885 ABCA9Q8IUA7 1624 aa18.23■□□□□ 0.51
NCAPD2-209ENST00000539885 PLEKHD1A6NEE1 506 aa18.22■□□□□ 0.51
NCAPD2-209ENST00000539885 CASKIN1Q8WXD9 1431 aa18.2■□□□□ 0.5
NCAPD2-209ENST00000539885 CDK13Q14004 1512 aaKnown RBP18.19■□□□□ 0.5
NCAPD2-209ENST00000539885 HECW2Q9P2P5 1572 aa18.18■□□□□ 0.5
NCAPD2-209ENST00000539885 FBXO41Q8TF61 875 aa18.18■□□□□ 0.5
NCAPD2-209ENST00000539885 CDK11AQ9UQ88 783 aaPredicted RBP18.17■□□□□ 0.5
NCAPD2-209ENST00000539885 FYCO1Q9BQS8 1478 aa18.17■□□□□ 0.5
NCAPD2-209ENST00000539885 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
NCAPD2-209ENST00000539885 CCDC18Q5T9S5 1454 aa18.16■□□□□ 0.5
NCAPD2-209ENST00000539885 PCF11O94913 1555 aaKnown RBP18.16■□□□□ 0.5
NCAPD2-209ENST00000539885 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
NCAPD2-209ENST00000539885 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
NCAPD2-209ENST00000539885 NEO1Q92859 1461 aa18.13■□□□□ 0.49
NCAPD2-209ENST00000539885 COL17A1Q9UMD9 1497 aaPredicted RBP18.12■□□□□ 0.49
NCAPD2-209ENST00000539885 ARAP3Q8WWN8 1544 aa18.11■□□□□ 0.49
NCAPD2-209ENST00000539885 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.1■□□□□ 0.491e-6■□□□□ 10.3
NCAPD2-209ENST00000539885 TROQ12816 1431 aaPredicted RBP18.1■□□□□ 0.49
NCAPD2-209ENST00000539885 TTC37Q6PGP7 1564 aa18.08■□□□□ 0.48
NCAPD2-209ENST00000539885 ADGRL1O94910 1474 aa18.07■□□□□ 0.48
NCAPD2-209ENST00000539885 KIF14Q15058 1648 aa18.07■□□□□ 0.48
NCAPD2-209ENST00000539885 CFAP74Q9C0B2 1584 aa18.06■□□□□ 0.48
NCAPD2-209ENST00000539885 LRRIQ1Q96JM4 1722 aa18.04■□□□□ 0.48
NCAPD2-209ENST00000539885 LMTK3Q96Q04 1460 aa18.04■□□□□ 0.48
NCAPD2-209ENST00000539885 FANCAO15360 1455 aa18.03■□□□□ 0.48
NCAPD2-209ENST00000539885 PLCH2O75038 1416 aa18.03■□□□□ 0.48
NCAPD2-209ENST00000539885 LOC105371045A0A1W2PR82 267 aa18■□□□□ 0.47
NCAPD2-209ENST00000539885 AKNAQ7Z591 1439 aa17.99■□□□□ 0.47
NCAPD2-209ENST00000539885 DENND4BO75064 1496 aaPredicted RBP17.97■□□□□ 0.47
NCAPD2-209ENST00000539885 MYO5CQ9NQX4 1742 aa17.97■□□□□ 0.47
NCAPD2-209ENST00000539885 VPS8Q8N3P4 1428 aa17.96■□□□□ 0.47
NCAPD2-209ENST00000539885 EFCAB2Q5VUJ9 269 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms