RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PRG4Q92954 1404 aaPredicted RBP28.96■■■□□ 2.23
DDB1-215ENST00000539712 TRHP20396 242 aaPredicted RBP28.96■■■□□ 2.23
DDB1-215ENST00000539712 CARMIL1Q5VZK9 1371 aa28.93■■■□□ 2.22
DDB1-215ENST00000539712 KIAA0586Q9BVV6 1533 aa28.89■■■□□ 2.22
DDB1-215ENST00000539712 RAPGEF2Q9Y4G8 1499 aa28.68■■■□□ 2.18
DDB1-215ENST00000539712 IQGAP2Q13576 1575 aa28.62■■■□□ 2.17
DDB1-215ENST00000539712 ADCY10Q96PN6 1610 aa28.59■■■□□ 2.17
DDB1-215ENST00000539712 PTPRGP23470 1445 aa28.56■■■□□ 2.16
DDB1-215ENST00000539712 DISP1Q96F81 1524 aa28.54■■■□□ 2.16
DDB1-215ENST00000539712 CARMIL2Q6F5E8 1435 aa28.53■■■□□ 2.16
DDB1-215ENST00000539712 PRXQ9BXM0 1461 aa28.53■■■□□ 2.16
DDB1-215ENST00000539712 TNIKQ9UKE5 1360 aa28.52■■■□□ 2.16
DDB1-215ENST00000539712 UGGT2Q9NYU1 1516 aa28.5■■■□□ 2.15
DDB1-215ENST00000539712 NPM1P06748 294 aaKnown RBP eCLIP28.48■■■□□ 2.15
DDB1-215ENST00000539712 MAPKBP1O60336 1514 aa28.48■■■□□ 2.15
DDB1-215ENST00000539712 KIF13AQ9H1H9 1805 aa28.47■■■□□ 2.15
DDB1-215ENST00000539712 TTBK1Q5TCY1 1321 aaPredicted RBP28.45■■■□□ 2.15
DDB1-215ENST00000539712 ABCC10Q5T3U5 1492 aa28.43■■■□□ 2.14
DDB1-215ENST00000539712 FAM69CQ0P6D2 419 aa28.38■■■□□ 2.13
DDB1-215ENST00000539712 KIAA0556O60303 1618 aa28.37■■■□□ 2.13
DDB1-215ENST00000539712 CSRNP3Q8WYN3 585 aa28.37■■■□□ 2.13
DDB1-215ENST00000539712 CTTNBP2Q8WZ74 1663 aa28.36■■■□□ 2.13
DDB1-215ENST00000539712 UHRF1BP1LA0JNW5 1464 aa28.36■■■□□ 2.13
DDB1-215ENST00000539712 ABCC2Q92887 1545 aa28.36■■■□□ 2.13
DDB1-215ENST00000539712 UACAQ9BZF9 1416 aa28.35■■■□□ 2.13
DDB1-215ENST00000539712 DIP2BQ9P265 1576 aa28.34■■■□□ 2.13
DDB1-215ENST00000539712 EEA1Q15075 1411 aa28.26■■■□□ 2.11
DDB1-215ENST00000539712 GOLGA3Q08378 1498 aa28.24■■■□□ 2.11
DDB1-215ENST00000539712 KDM5BQ9UGL1 1544 aa28.23■■■□□ 2.11
DDB1-215ENST00000539712 ASXL2Q76L83 1435 aa28.23■■■□□ 2.11
DDB1-215ENST00000539712 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
DDB1-215ENST00000539712 PLB1Q6P1J6 1458 aa28.19■■■□□ 2.1
DDB1-215ENST00000539712 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
DDB1-215ENST00000539712 ABCA8O94911 1581 aa28.13■■■□□ 2.09
DDB1-215ENST00000539712 ZCCHC11Q5TAX3 1644 aaKnown RBP28.13■■■□□ 2.09
DDB1-215ENST00000539712 GLI2P10070 1586 aa28.11■■■□□ 2.09
DDB1-215ENST00000539712 P3H3Q8IVL6 736 aa28.08■■■□□ 2.09
DDB1-215ENST00000539712 TSPOAP1O95153 1857 aa28.08■■■□□ 2.09
DDB1-215ENST00000539712 EPRSP07814 1512 aaKnown RBP28.07■■■□□ 2.08
DDB1-215ENST00000539712 SAMD9Q5K651 1589 aa28.06■■■□□ 2.08
DDB1-215ENST00000539712 PPRC1Q5VV67 1664 aaKnown RBP28.01■■■□□ 2.07
DDB1-215ENST00000539712 KIF21BO75037 1637 aa28.01■■■□□ 2.07
DDB1-215ENST00000539712 WDR7Q9Y4E6 1490 aa27.99■■■□□ 2.07
DDB1-215ENST00000539712 KDM6BO15054 1643 aa27.96■■■□□ 2.07
DDB1-215ENST00000539712 MAP3K4Q9Y6R4 1608 aa27.96■■■□□ 2.07
DDB1-215ENST00000539712 AEBP2Q6ZN18 517 aaPredicted RBP27.95■■■□□ 2.06
DDB1-215ENST00000539712 ATP10BO94823 1461 aa27.92■■■□□ 2.06
DDB1-215ENST00000539712 RANGAP1P46060 587 aaPredicted RBP27.92■■■□□ 2.06
DDB1-215ENST00000539712 ARID3CA6NKF2 412 aa27.88■■■□□ 2.05
DDB1-215ENST00000539712 FHOD3Q2V2M9 1422 aa27.88■■■□□ 2.05
DDB1-215ENST00000539712 KCNH8Q96L42 1107 aa27.87■■■□□ 2.05
DDB1-215ENST00000539712 COL17A1Q9UMD9 1497 aaPredicted RBP27.87■■■□□ 2.05
DDB1-215ENST00000539712 RAPGEF6Q8TEU7 1601 aa27.84■■■□□ 2.05
DDB1-215ENST00000539712 EHMT2Q96KQ7 1210 aa27.82■■■□□ 2.04
DDB1-215ENST00000539712 NUP153P49790 1475 aaKnown RBP27.81■■■□□ 2.04
DDB1-215ENST00000539712 TEX14Q8IWB6 1497 aa27.8■■■□□ 2.04
DDB1-215ENST00000539712 EFCAB5A4FU69 1503 aa27.8■■■□□ 2.04
DDB1-215ENST00000539712 CD109Q6YHK3 1445 aa27.79■■■□□ 2.04
DDB1-215ENST00000539712 UBTFP17480 764 aaKnown RBP27.78■■■□□ 2.04
DDB1-215ENST00000539712 MAGI3Q5TCQ9 1506 aa27.77■■■□□ 2.04
DDB1-215ENST00000539712 CFAP43Q8NDM7 1665 aa27.76■■■□□ 2.03
DDB1-215ENST00000539712 ARHGAP35Q9NRY4 1499 aa27.68■■■□□ 2.02
DDB1-215ENST00000539712 KDM4FA0A1W2PPD8 638 aa27.66■■■□□ 2.02
DDB1-215ENST00000539712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.66■■■□□ 2.02
DDB1-215ENST00000539712 HNRNPUL2Q1KMD3 747 aaKnown RBP27.66■■■□□ 2.02
DDB1-215ENST00000539712 ABCA9Q8IUA7 1624 aa27.66■■■□□ 2.02
DDB1-215ENST00000539712 PLEKHD1A6NEE1 506 aa27.58■■■□□ 2.01
DDB1-215ENST00000539712 ARAP3Q8WWN8 1544 aa27.56■■■□□ 2
DDB1-215ENST00000539712 FMN1Q68DA7 1419 aa27.55■■■□□ 2
DDB1-215ENST00000539712 CDK13Q14004 1512 aaKnown RBP27.54■■■□□ 2
DDB1-215ENST00000539712 PHLDB1Q86UU1 1377 aa27.5■■□□□ 1.99
DDB1-215ENST00000539712 NEO1Q92859 1461 aa27.47■■□□□ 1.99
DDB1-215ENST00000539712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.46■■□□□ 1.99
DDB1-215ENST00000539712 ADGRL1O94910 1474 aa27.44■■□□□ 1.98
DDB1-215ENST00000539712 ATP1B4Q9UN42 357 aaPredicted RBP27.44■■□□□ 1.98
DDB1-215ENST00000539712 HECW1Q76N89 1606 aa27.44■■□□□ 1.98
DDB1-215ENST00000539712 RAPGEF3O95398 923 aa27.42■■□□□ 1.98
DDB1-215ENST00000539712 TTC37Q6PGP7 1564 aa27.41■■□□□ 1.98
DDB1-215ENST00000539712 LRRIQ1Q96JM4 1722 aa27.36■■□□□ 1.97
DDB1-215ENST00000539712 FRMPD1Q5SYB0 1578 aa27.35■■□□□ 1.97
DDB1-215ENST00000539712 AKNAQ7Z591 1439 aa27.34■■□□□ 1.97
DDB1-215ENST00000539712 FANCAO15360 1455 aa27.34■■□□□ 1.97
DDB1-215ENST00000539712 CASKIN1Q8WXD9 1431 aa27.33■■□□□ 1.97
DDB1-215ENST00000539712 CDK11AQ9UQ88 783 aaPredicted RBP27.32■■□□□ 1.96
DDB1-215ENST00000539712 CLIP1P30622 1438 aa27.32■■□□□ 1.96
DDB1-215ENST00000539712 PLCH2O75038 1416 aa27.31■■□□□ 1.96
DDB1-215ENST00000539712 TROQ12816 1431 aaPredicted RBP27.3■■□□□ 1.96
DDB1-215ENST00000539712 PCF11O94913 1555 aaKnown RBP27.3■■□□□ 1.96
DDB1-215ENST00000539712 KIF14Q15058 1648 aa27.28■■□□□ 1.96
DDB1-215ENST00000539712 DENND4BO75064 1496 aaPredicted RBP27.27■■□□□ 1.96
DDB1-215ENST00000539712 CFAP74Q9C0B2 1584 aa27.25■■□□□ 1.95
DDB1-215ENST00000539712 RICTORQ6R327 1708 aa27.24■■□□□ 1.95
DDB1-215ENST00000539712 CCDC18Q5T9S5 1454 aa27.21■■□□□ 1.95
DDB1-215ENST00000539712 FYCO1Q9BQS8 1478 aa27.21■■□□□ 1.95
DDB1-215ENST00000539712 EFCAB2Q5VUJ9 269 aa27.18■■□□□ 1.94
DDB1-215ENST00000539712 SCAPERQ9BY12 1400 aa27.17■■□□□ 1.94
DDB1-215ENST00000539712 MYO5CQ9NQX4 1742 aa27.17■■□□□ 1.94
DDB1-215ENST00000539712 ZMYM4Q5VZL5 1548 aa27.16■■□□□ 1.94
DDB1-215ENST00000539712 ARHGEF40Q8TER5 1519 aa27.13■■□□□ 1.93
DDB1-215ENST00000539712 POGZQ7Z3K3 1410 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms