RNA–Protein interactions for RNA: ENST00000539595.5

TRPT1-208, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 5

Gene TRPT1, Length 1,809 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-208ENST00000539595 PBRM1Q86U86 1689 aa27.33■■□□□ 1.97
TRPT1-208ENST00000539595 FHAD1B1AJZ9 1412 aa27.32■■□□□ 1.96
TRPT1-208ENST00000539595 MAP3K1Q13233 1512 aa27.31■■□□□ 1.96
TRPT1-208ENST00000539595 IFT140Q96RY7 1462 aa27.28■■□□□ 1.96
TRPT1-208ENST00000539595 TIAM1Q13009 1591 aa27.28■■□□□ 1.96
TRPT1-208ENST00000539595 FHOD3Q2V2M9 1422 aa27.27■■□□□ 1.96
TRPT1-208ENST00000539595 AQRO60306 1485 aaKnown RBP eCLIP27.26■■□□□ 1.956e-9■■■■■ 37.6
TRPT1-208ENST00000539595 PCF11O94913 1555 aaKnown RBP27.26■■□□□ 1.95
TRPT1-208ENST00000539595 HNRNPUL2Q1KMD3 747 aaKnown RBP27.25■■□□□ 1.95
TRPT1-208ENST00000539595 ERCC6Q03468 1493 aa27.24■■□□□ 1.95
TRPT1-208ENST00000539595 ADAMTS12P58397 1594 aa27.23■■□□□ 1.95
TRPT1-208ENST00000539595 P3H3Q8IVL6 736 aa27.23■■□□□ 1.95
TRPT1-208ENST00000539595 GRIN2BQ13224 1484 aa27.21■■□□□ 1.95
TRPT1-208ENST00000539595 RRBP1Q9P2E9 1410 aaKnown RBP27.2■■□□□ 1.94
TRPT1-208ENST00000539595 CFAP43Q8NDM7 1665 aa27.2■■□□□ 1.94
TRPT1-208ENST00000539595 SAMD9Q5K651 1589 aa27.19■■□□□ 1.94
TRPT1-208ENST00000539595 THOC2Q8NI27 1593 aaKnown RBP27.19■■□□□ 1.94
TRPT1-208ENST00000539595 FYCO1Q9BQS8 1478 aa27.18■■□□□ 1.94
TRPT1-208ENST00000539595 ZNF608Q9ULD9 1512 aaPredicted RBP27.18■■□□□ 1.94
TRPT1-208ENST00000539595 CASKIN1Q8WXD9 1431 aa27.15■■□□□ 1.94
TRPT1-208ENST00000539595 LRRC9Q6ZRR7 1453 aa27.15■■□□□ 1.94
TRPT1-208ENST00000539595 FMN1Q68DA7 1419 aa27.12■■□□□ 1.93
TRPT1-208ENST00000539595 EIF4G3O43432 1585 aaKnown RBP27.08■■□□□ 1.93
TRPT1-208ENST00000539595 SNAPC4Q5SXM2 1469 aa27.07■■□□□ 1.92
TRPT1-208ENST00000539595 CCNB3Q8WWL7 1395 aa27.07■■□□□ 1.92
TRPT1-208ENST00000539595 IQGAP2Q13576 1575 aa27.04■■□□□ 1.92
TRPT1-208ENST00000539595 ATP1B4Q9UN42 357 aaPredicted RBP27.01■■□□□ 1.91
TRPT1-208ENST00000539595 PHLDB1Q86UU1 1377 aa26.96■■□□□ 1.91
TRPT1-208ENST00000539595 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
TRPT1-208ENST00000539595 MAGI1Q96QZ7 1491 aaPredicted RBP26.91■■□□□ 1.9
TRPT1-208ENST00000539595 UGGT2Q9NYU1 1516 aa26.9■■□□□ 1.9
TRPT1-208ENST00000539595 LRRIQ1Q96JM4 1722 aa26.9■■□□□ 1.9
TRPT1-208ENST00000539595 KIAA0586Q9BVV6 1533 aa26.87■■□□□ 1.89
TRPT1-208ENST00000539595 SYNJ2O15056 1496 aa26.82■■□□□ 1.88
TRPT1-208ENST00000539595 MTUS2Q5JR59 1369 aa26.8■■□□□ 1.88
TRPT1-208ENST00000539595 HECW1Q76N89 1606 aa26.8■■□□□ 1.88
TRPT1-208ENST00000539595 CCDC18Q5T9S5 1454 aa26.79■■□□□ 1.88
TRPT1-208ENST00000539595 DHX57Q6P158 1386 aaKnown RBP26.78■■□□□ 1.88
TRPT1-208ENST00000539595 ITGAEP38570 1179 aa26.78■■□□□ 1.88
TRPT1-208ENST00000539595 KIAA0556O60303 1618 aa26.77■■□□□ 1.88
TRPT1-208ENST00000539595 EHBP1L1Q8N3D4 1523 aa26.76■■□□□ 1.87
TRPT1-208ENST00000539595 DISP1Q96F81 1524 aa26.75■■□□□ 1.87
TRPT1-208ENST00000539595 CEP170Q5SW79 1584 aa26.74■■□□□ 1.87
TRPT1-208ENST00000539595 CLSPNQ9HAW4 1339 aa26.73■■□□□ 1.87
TRPT1-208ENST00000539595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.73■■□□□ 1.87
TRPT1-208ENST00000539595 FAM50AQ14320 339 aaKnown RBP26.72■■□□□ 1.87
TRPT1-208ENST00000539595 CHMP7Q8WUX9 453 aaPredicted RBP26.72■■□□□ 1.87
TRPT1-208ENST00000539595 FGD6Q6ZV73 1430 aa26.71■■□□□ 1.87
TRPT1-208ENST00000539595 SUPT6HQ7KZ85 1726 aaKnown RBP26.71■■□□□ 1.87
TRPT1-208ENST00000539595 NCOA2Q15596 1464 aa26.7■■□□□ 1.86
TRPT1-208ENST00000539595 MAGI3Q5TCQ9 1506 aa26.69■■□□□ 1.86
TRPT1-208ENST00000539595 EPRSP07814 1512 aaKnown RBP26.69■■□□□ 1.86
TRPT1-208ENST00000539595 NUP160Q12769 1436 aa26.67■■□□□ 1.86
TRPT1-208ENST00000539595 RAB3GAP2Q9H2M9 1393 aa26.66■■□□□ 1.86
TRPT1-208ENST00000539595 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
TRPT1-208ENST00000539595 MYOM3Q5VTT5 1437 aa26.64■■□□□ 1.85
TRPT1-208ENST00000539595 SETD5Q9C0A6 1442 aa26.64■■□□□ 1.85
TRPT1-208ENST00000539595 CDK13Q14004 1512 aaKnown RBP26.63■■□□□ 1.85
TRPT1-208ENST00000539595 FBLN2P98095 1184 aa26.62■■□□□ 1.85
TRPT1-208ENST00000539595 RAPGEF6Q8TEU7 1601 aa26.57■■□□□ 1.84
TRPT1-208ENST00000539595 NUP153P49790 1475 aaKnown RBP26.54■■□□□ 1.84
TRPT1-208ENST00000539595 PTPN23Q9H3S7 1636 aa26.51■■□□□ 1.84
TRPT1-208ENST00000539595 CARMIL2Q6F5E8 1435 aa26.5■■□□□ 1.83
TRPT1-208ENST00000539595 ARID3CA6NKF2 412 aa26.49■■□□□ 1.83
TRPT1-208ENST00000539595 JPH4Q96JJ6 628 aa26.49■■□□□ 1.83
TRPT1-208ENST00000539595 MAPKBP1O60336 1514 aa26.47■■□□□ 1.83
TRPT1-208ENST00000539595 ZNF316A6NFI3 1004 aaPredicted RBP26.46■■□□□ 1.83
TRPT1-208ENST00000539595 TCOF1Q13428 1488 aaKnown RBP26.46■■□□□ 1.83
TRPT1-208ENST00000539595 PTPRKQ15262 1439 aa26.45■■□□□ 1.83
TRPT1-208ENST00000539595 PLB1Q6P1J6 1458 aa26.42■■□□□ 1.82
TRPT1-208ENST00000539595 HFM1A2PYH4 1435 aa26.4■■□□□ 1.82
TRPT1-208ENST00000539595 MIA2Q96PC5 1412 aa26.4■■□□□ 1.82
TRPT1-208ENST00000539595 DIEXFQ68CQ4 756 aaKnown RBP26.39■■□□□ 1.81
TRPT1-208ENST00000539595 CHD1O14646 1710 aa26.38■■□□□ 1.81
TRPT1-208ENST00000539595 CDK11AQ9UQ88 783 aaPredicted RBP26.35■■□□□ 1.81
TRPT1-208ENST00000539595 ABCA8O94911 1581 aa26.33■■□□□ 1.81
TRPT1-208ENST00000539595 NAIPQ13075 1403 aa26.32■■□□□ 1.8
TRPT1-208ENST00000539595 TROQ12816 1431 aaPredicted RBP26.32■■□□□ 1.8
TRPT1-208ENST00000539595 PRG4Q92954 1404 aaPredicted RBP26.29■■□□□ 1.8
TRPT1-208ENST00000539595 ADCY10Q96PN6 1610 aa26.27■■□□□ 1.8
TRPT1-208ENST00000539595 AKNAQ7Z591 1439 aa26.25■■□□□ 1.79
TRPT1-208ENST00000539595 GCC2Q8IWJ2 1684 aa26.25■■□□□ 1.79
TRPT1-208ENST00000539595 UACAQ9BZF9 1416 aa26.24■■□□□ 1.79
TRPT1-208ENST00000539595 SHROOM2Q13796 1616 aa26.22■■□□□ 1.79
TRPT1-208ENST00000539595 KIF14Q15058 1648 aa26.21■■□□□ 1.79
TRPT1-208ENST00000539595 ITSN2Q9NZM3 1697 aa26.19■■□□□ 1.78
TRPT1-208ENST00000539595 DNMT1P26358 1616 aaKnown RBP26.18■■□□□ 1.78
TRPT1-208ENST00000539595 ATP10BO94823 1461 aa26.18■■□□□ 1.78
TRPT1-208ENST00000539595 PTPRGP23470 1445 aa26.18■■□□□ 1.78
TRPT1-208ENST00000539595 DAPK1P53355 1430 aa26.17■■□□□ 1.78
TRPT1-208ENST00000539595 CHIC2Q9UKJ5 165 aa26.16■■□□□ 1.78
TRPT1-208ENST00000539595 RRP7BPQ9NSQ0 103 aa26.15■■□□□ 1.78
TRPT1-208ENST00000539595 SIN3AQ96ST3 1273 aa26.14■■□□□ 1.78
TRPT1-208ENST00000539595 GPATCH8Q9UKJ3 1502 aaKnown RBP26.14■■□□□ 1.77
TRPT1-208ENST00000539595 ABCC5O15440 1437 aa26.13■■□□□ 1.77
TRPT1-208ENST00000539595 ZNF644Q9H582 1327 aaPredicted RBP26.12■■□□□ 1.77
TRPT1-208ENST00000539595 CAMSAP2Q08AD1 1489 aa26.11■■□□□ 1.77
TRPT1-208ENST00000539595 ROCK1Q13464 1354 aa26.11■■□□□ 1.77
TRPT1-208ENST00000539595 NEUROD1Q13562 356 aa26.09■■□□□ 1.77
TRPT1-208ENST00000539595 KDM6BO15054 1643 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms