RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 FAM69CQ0P6D2 419 aa15.11■□□□□ 0.01
RTN4IP1-204ENST00000539449 ABCC10Q5T3U5 1492 aa15.09■□□□□ 0.01
RTN4IP1-204ENST00000539449 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
RTN4IP1-204ENST00000539449 HECW2Q9P2P5 1572 aa15.07■□□□□ 0
RTN4IP1-204ENST00000539449 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
RTN4IP1-204ENST00000539449 EEA1Q15075 1411 aa15.07■□□□□ 0
RTN4IP1-204ENST00000539449 SHROOM2Q13796 1616 aa15.06■□□□□ 0
RTN4IP1-204ENST00000539449 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
RTN4IP1-204ENST00000539449 DIP2BQ9P265 1576 aa15.06■□□□□ 0
RTN4IP1-204ENST00000539449 GRIN2AQ12879 1464 aa15.04■□□□□ -0
RTN4IP1-204ENST00000539449 KIF27Q86VH2 1401 aa15.04■□□□□ -0
RTN4IP1-204ENST00000539449 TSPOAP1O95153 1857 aa15.02■□□□□ -0
RTN4IP1-204ENST00000539449 FBXO41Q8TF61 875 aa15.01□□□□□ -0.01
RTN4IP1-204ENST00000539449 MAPKBP1O60336 1514 aa15.01□□□□□ -0.01
RTN4IP1-204ENST00000539449 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
RTN4IP1-204ENST00000539449 NUP160Q12769 1436 aa15□□□□□ -0.01
RTN4IP1-204ENST00000539449 ABCA5Q8WWZ7 1642 aa15□□□□□ -0.01
RTN4IP1-204ENST00000539449 IGF1RP08069 1367 aa14.98□□□□□ -0.01
RTN4IP1-204ENST00000539449 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
RTN4IP1-204ENST00000539449 KIF21BO75037 1637 aa14.95□□□□□ -0.02
RTN4IP1-204ENST00000539449 PRXQ9BXM0 1461 aa14.94□□□□□ -0.02
RTN4IP1-204ENST00000539449 ADAMTS12P58397 1594 aa14.94□□□□□ -0.02
RTN4IP1-204ENST00000539449 PRG4Q92954 1404 aaPredicted RBP14.93□□□□□ -0.02
RTN4IP1-204ENST00000539449 RAPGEF2Q9Y4G8 1499 aa14.92□□□□□ -0.02
RTN4IP1-204ENST00000539449 GOLGA3Q08378 1498 aa14.89□□□□□ -0.03
RTN4IP1-204ENST00000539449 ADCY10Q96PN6 1610 aa14.89□□□□□ -0.03
RTN4IP1-204ENST00000539449 CARMIL1Q5VZK9 1371 aa14.88□□□□□ -0.03
RTN4IP1-204ENST00000539449 PLPPR3Q6T4P5 718 aa14.88□□□□□ -0.03
RTN4IP1-204ENST00000539449 ERICH3Q5RHP9 1530 aa14.87□□□□□ -0.03
RTN4IP1-204ENST00000539449 LMTK3Q96Q04 1460 aa14.87□□□□□ -0.03
RTN4IP1-204ENST00000539449 CUL7Q14999 1698 aa14.86□□□□□ -0.03
RTN4IP1-204ENST00000539449 FHAD1B1AJZ9 1412 aa14.84□□□□□ -0.03
RTN4IP1-204ENST00000539449 UBTFP17480 764 aaKnown RBP14.84□□□□□ -0.03
RTN4IP1-204ENST00000539449 JPH4Q96JJ6 628 aa14.84□□□□□ -0.03
RTN4IP1-204ENST00000539449 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.04
RTN4IP1-204ENST00000539449 PPRC1Q5VV67 1664 aaKnown RBP14.81□□□□□ -0.04
RTN4IP1-204ENST00000539449 MSH5O43196 834 aa14.77□□□□□ -0.05
RTN4IP1-204ENST00000539449 COL17A1Q9UMD9 1497 aaPredicted RBP14.75□□□□□ -0.05
RTN4IP1-204ENST00000539449 SOCS7O14512 581 aa14.74□□□□□ -0.05
RTN4IP1-204ENST00000539449 CEP162Q5TB80 1403 aa14.73□□□□□ -0.05
RTN4IP1-204ENST00000539449 GLI2P10070 1586 aa14.72□□□□□ -0.05
RTN4IP1-204ENST00000539449 CTTNBP2Q8WZ74 1663 aa14.71□□□□□ -0.05
RTN4IP1-204ENST00000539449 RANGAP1P46060 587 aaPredicted RBP14.71□□□□□ -0.05
RTN4IP1-204ENST00000539449 ILDR2Q71H61 639 aa14.7□□□□□ -0.06
RTN4IP1-204ENST00000539449 PIAS4Q8N2W9 510 aaPredicted RBP14.67□□□□□ -0.06
RTN4IP1-204ENST00000539449 PPP6R1Q9UPN7 881 aa14.67□□□□□ -0.06
RTN4IP1-204ENST00000539449 CLIP1P30622 1438 aa14.66□□□□□ -0.06
RTN4IP1-204ENST00000539449 ASXL2Q76L83 1435 aa14.66□□□□□ -0.06
RTN4IP1-204ENST00000539449 PLB1Q6P1J6 1458 aa14.65□□□□□ -0.06
RTN4IP1-204ENST00000539449 MAP3K4Q9Y6R4 1608 aa14.63□□□□□ -0.07
RTN4IP1-204ENST00000539449 DISP3Q9P2K9 1392 aa14.62□□□□□ -0.07
RTN4IP1-204ENST00000539449 ABCC2Q92887 1545 aa14.62□□□□□ -0.07
RTN4IP1-204ENST00000539449 TEX14Q8IWB6 1497 aa14.61□□□□□ -0.07
RTN4IP1-204ENST00000539449 ARHGAP35Q9NRY4 1499 aa14.61□□□□□ -0.07
RTN4IP1-204ENST00000539449 ADRA2BP18089 450 aa14.6□□□□□ -0.07
RTN4IP1-204ENST00000539449 POTEDQ86YR6 584 aa14.6□□□□□ -0.07
RTN4IP1-204ENST00000539449 PTPRGP23470 1445 aa14.58□□□□□ -0.07
RTN4IP1-204ENST00000539449 IQGAP2Q13576 1575 aa14.58□□□□□ -0.08
RTN4IP1-204ENST00000539449 EPRSP07814 1512 aaKnown RBP14.56□□□□□ -0.08
RTN4IP1-204ENST00000539449 KIAA0586Q9BVV6 1533 aa14.56□□□□□ -0.08
RTN4IP1-204ENST00000539449 P3H3Q8IVL6 736 aa14.56□□□□□ -0.08
RTN4IP1-204ENST00000539449 TTBK1Q5TCY1 1321 aaPredicted RBP14.55□□□□□ -0.08
RTN4IP1-204ENST00000539449 SAMD9Q5K651 1589 aa14.54□□□□□ -0.08
RTN4IP1-204ENST00000539449 UGGT2Q9NYU1 1516 aa14.51□□□□□ -0.09
RTN4IP1-204ENST00000539449 FHOD3Q2V2M9 1422 aa14.51□□□□□ -0.09
RTN4IP1-204ENST00000539449 EFCAB5A4FU69 1503 aa14.51□□□□□ -0.09
RTN4IP1-204ENST00000539449 UHRF1BP1LA0JNW5 1464 aa14.5□□□□□ -0.09
RTN4IP1-204ENST00000539449 PTPRMP28827 1452 aa14.5□□□□□ -0.09
RTN4IP1-204ENST00000539449 PCF11O94913 1555 aaKnown RBP14.5□□□□□ -0.09
RTN4IP1-204ENST00000539449 VPS8Q8N3P4 1428 aa14.49□□□□□ -0.09
RTN4IP1-204ENST00000539449 CERKQ8TCT0 537 aa14.48□□□□□ -0.09
RTN4IP1-204ENST00000539449 DISP1Q96F81 1524 aa14.47□□□□□ -0.09
RTN4IP1-204ENST00000539449 ADAMTSL3P82987 1691 aa14.47□□□□□ -0.09
RTN4IP1-204ENST00000539449 KIAA0556O60303 1618 aa14.45□□□□□ -0.1
RTN4IP1-204ENST00000539449 SPATA31D1Q6ZQQ2 1576 aa14.45□□□□□ -0.1
RTN4IP1-204ENST00000539449 PPARGC1BQ86YN6 1023 aaKnown RBP14.45□□□□□ -0.1
RTN4IP1-204ENST00000539449 UACAQ9BZF9 1416 aa14.45□□□□□ -0.1
RTN4IP1-204ENST00000539449 KDM5BQ9UGL1 1544 aa14.45□□□□□ -0.1
RTN4IP1-204ENST00000539449 CARMIL2Q6F5E8 1435 aa14.44□□□□□ -0.1
RTN4IP1-204ENST00000539449 ZCCHC11Q5TAX3 1644 aaKnown RBP14.44□□□□□ -0.1
RTN4IP1-204ENST00000539449 MAGI3Q5TCQ9 1506 aa14.41□□□□□ -0.1
RTN4IP1-204ENST00000539449 CFAP43Q8NDM7 1665 aa14.39□□□□□ -0.11
RTN4IP1-204ENST00000539449 LRRIQ1Q96JM4 1722 aa14.38□□□□□ -0.11
RTN4IP1-204ENST00000539449 CD109Q6YHK3 1445 aa14.38□□□□□ -0.11
RTN4IP1-204ENST00000539449 WDR7Q9Y4E6 1490 aa14.38□□□□□ -0.11
RTN4IP1-204ENST00000539449 MADDQ8WXG6 1647 aa14.37□□□□□ -0.11
RTN4IP1-204ENST00000539449 HSPA2P54652 639 aa14.36□□□□□ -0.11
RTN4IP1-204ENST00000539449 BCORL1Q5H9F3 1711 aa14.35□□□□□ -0.11
RTN4IP1-204ENST00000539449 FMN1Q68DA7 1419 aa14.35□□□□□ -0.11
RTN4IP1-204ENST00000539449 CASKIN1Q8WXD9 1431 aa14.35□□□□□ -0.11
RTN4IP1-204ENST00000539449 ATP1B4Q9UN42 357 aaPredicted RBP14.33□□□□□ -0.12
RTN4IP1-204ENST00000539449 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
RTN4IP1-204ENST00000539449 KANK4Q5T7N3 995 aaPredicted RBP14.32□□□□□ -0.12
RTN4IP1-204ENST00000539449 ARAP3Q8WWN8 1544 aa14.31□□□□□ -0.12
RTN4IP1-204ENST00000539449 TIAM1Q13009 1591 aa14.3□□□□□ -0.12
RTN4IP1-204ENST00000539449 RIMS1Q86UR5 1692 aaKnown RBP14.3□□□□□ -0.12
RTN4IP1-204ENST00000539449 RAPGEF6Q8TEU7 1601 aa14.3□□□□□ -0.12
RTN4IP1-204ENST00000539449 APLP2Q06481 763 aa14.28□□□□□ -0.12
RTN4IP1-204ENST00000539449 KCNH8Q96L42 1107 aa14.28□□□□□ -0.12
RTN4IP1-204ENST00000539449 ABCA8O94911 1581 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms