RNA–Protein interactions for RNA: ENST00000539365.1

PTPN6-213, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-213ENST00000539365 CUL7Q14999 1698 aa23.47■■□□□ 1.35
PTPN6-213ENST00000539365 ERCC6L2Q5T890 1561 aa23.44■■□□□ 1.34
PTPN6-213ENST00000539365 KIAA0586Q9BVV6 1533 aa23.44■■□□□ 1.34
PTPN6-213ENST00000539365 RUSC2Q8N2Y8 1516 aa23.37■■□□□ 1.33
PTPN6-213ENST00000539365 NPM1P06748 294 aaKnown RBP eCLIP23.32■■□□□ 1.32
PTPN6-213ENST00000539365 RAPGEF2Q9Y4G8 1499 aa23.3■■□□□ 1.32
PTPN6-213ENST00000539365 CARMIL2Q6F5E8 1435 aa23.26■■□□□ 1.31
PTPN6-213ENST00000539365 PTPRGP23470 1445 aa23.22■■□□□ 1.31
PTPN6-213ENST00000539365 TNIKQ9UKE5 1360 aa23.18■■□□□ 1.3
PTPN6-213ENST00000539365 IQGAP2Q13576 1575 aa23.18■■□□□ 1.3
PTPN6-213ENST00000539365 TTBK1Q5TCY1 1321 aaPredicted RBP23.17■■□□□ 1.3
PTPN6-213ENST00000539365 CSRNP3Q8WYN3 585 aa23.14■■□□□ 1.29
PTPN6-213ENST00000539365 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
PTPN6-213ENST00000539365 FAM69CQ0P6D2 419 aa23.07■■□□□ 1.28
PTPN6-213ENST00000539365 UGGT2Q9NYU1 1516 aa23.07■■□□□ 1.28
PTPN6-213ENST00000539365 DISP1Q96F81 1524 aa23.05■■□□□ 1.28
PTPN6-213ENST00000539365 EEA1Q15075 1411 aa23.04■■□□□ 1.28
PTPN6-213ENST00000539365 ADCY10Q96PN6 1610 aa23.04■■□□□ 1.28
PTPN6-213ENST00000539365 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
PTPN6-213ENST00000539365 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
PTPN6-213ENST00000539365 UACAQ9BZF9 1416 aa23.01■■□□□ 1.27
PTPN6-213ENST00000539365 ABCC10Q5T3U5 1492 aa23.01■■□□□ 1.27
PTPN6-213ENST00000539365 GOLGA3Q08378 1498 aa23■■□□□ 1.27
PTPN6-213ENST00000539365 UHRF1BP1LA0JNW5 1464 aa22.98■■□□□ 1.27
PTPN6-213ENST00000539365 ABCC2Q92887 1545 aa22.97■■□□□ 1.27
PTPN6-213ENST00000539365 CHIC1Q5VXU3 224 aa22.94■■□□□ 1.26
PTPN6-213ENST00000539365 KIAA0556O60303 1618 aa22.93■■□□□ 1.26
PTPN6-213ENST00000539365 CTTNBP2Q8WZ74 1663 aa22.92■■□□□ 1.26
PTPN6-213ENST00000539365 PLB1Q6P1J6 1458 aa22.91■■□□□ 1.26
PTPN6-213ENST00000539365 KIF13AQ9H1H9 1805 aa22.88■■□□□ 1.25
PTPN6-213ENST00000539365 ASXL2Q76L83 1435 aa22.87■■□□□ 1.25
PTPN6-213ENST00000539365 DIP2BQ9P265 1576 aa22.86■■□□□ 1.25
PTPN6-213ENST00000539365 KDM5BQ9UGL1 1544 aa22.85■■□□□ 1.25
PTPN6-213ENST00000539365 P3H3Q8IVL6 736 aa22.84■■□□□ 1.25
PTPN6-213ENST00000539365 RANGAP1P46060 587 aaPredicted RBP22.76■■□□□ 1.23
PTPN6-213ENST00000539365 GLI2P10070 1586 aa22.74■■□□□ 1.23
PTPN6-213ENST00000539365 UBTFP17480 764 aaKnown RBP22.73■■□□□ 1.23
PTPN6-213ENST00000539365 ABCA8O94911 1581 aa22.72■■□□□ 1.23
PTPN6-213ENST00000539365 EPRSP07814 1512 aaKnown RBP22.72■■□□□ 1.23
PTPN6-213ENST00000539365 ZCCHC11Q5TAX3 1644 aaKnown RBP22.71■■□□□ 1.23
PTPN6-213ENST00000539365 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
PTPN6-213ENST00000539365 KIF21BO75037 1637 aa22.69■■□□□ 1.22
PTPN6-213ENST00000539365 WDR7Q9Y4E6 1490 aa22.69■■□□□ 1.22
PTPN6-213ENST00000539365 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
PTPN6-213ENST00000539365 SAMD9Q5K651 1589 aa22.66■■□□□ 1.22
PTPN6-213ENST00000539365 TSPOAP1O95153 1857 aa22.64■■□□□ 1.22
PTPN6-213ENST00000539365 ARID3CA6NKF2 412 aa22.64■■□□□ 1.21
PTPN6-213ENST00000539365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.21
PTPN6-213ENST00000539365 HNRNPUL2Q1KMD3 747 aaKnown RBP22.64■■□□□ 1.21
PTPN6-213ENST00000539365 EHMT2Q96KQ7 1210 aa22.64■■□□□ 1.21
PTPN6-213ENST00000539365 KDM6BO15054 1643 aa22.62■■□□□ 1.21
PTPN6-213ENST00000539365 ATP10BO94823 1461 aa22.61■■□□□ 1.21
PTPN6-213ENST00000539365 TEX14Q8IWB6 1497 aa22.61■■□□□ 1.21
PTPN6-213ENST00000539365 FHOD3Q2V2M9 1422 aa22.58■■□□□ 1.21
PTPN6-213ENST00000539365 CD109Q6YHK3 1445 aa22.57■■□□□ 1.2
PTPN6-213ENST00000539365 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
PTPN6-213ENST00000539365 MAP3K4Q9Y6R4 1608 aa22.55■■□□□ 1.2
PTPN6-213ENST00000539365 PLEKHD1A6NEE1 506 aa22.54■■□□□ 1.2
PTPN6-213ENST00000539365 RAPGEF6Q8TEU7 1601 aa22.53■■□□□ 1.2
PTPN6-213ENST00000539365 PPRC1Q5VV67 1664 aaKnown RBP22.5■■□□□ 1.19
PTPN6-213ENST00000539365 MAGI3Q5TCQ9 1506 aa22.5■■□□□ 1.19
PTPN6-213ENST00000539365 NUP153P49790 1475 aaKnown RBP22.48■■□□□ 1.19
PTPN6-213ENST00000539365 CFAP43Q8NDM7 1665 aa22.46■■□□□ 1.19
PTPN6-213ENST00000539365 ATP1B4Q9UN42 357 aaPredicted RBP22.45■■□□□ 1.18
PTPN6-213ENST00000539365 FMN1Q68DA7 1419 aa22.45■■□□□ 1.18
PTPN6-213ENST00000539365 COL17A1Q9UMD9 1497 aaPredicted RBP22.45■■□□□ 1.18
PTPN6-213ENST00000539365 PHLDB1Q86UU1 1377 aa22.43■■□□□ 1.18
PTPN6-213ENST00000539365 CDK11AQ9UQ88 783 aaPredicted RBP22.4■■□□□ 1.18
PTPN6-213ENST00000539365 ARHGAP35Q9NRY4 1499 aa22.4■■□□□ 1.18
PTPN6-213ENST00000539365 ABCA9Q8IUA7 1624 aa22.35■■□□□ 1.17
PTPN6-213ENST00000539365 KDM4FA0A1W2PPD8 638 aa22.34■■□□□ 1.17
PTPN6-213ENST00000539365 ARAP3Q8WWN8 1544 aa22.31■■□□□ 1.16
PTPN6-213ENST00000539365 NEO1Q92859 1461 aa22.3■■□□□ 1.16
PTPN6-213ENST00000539365 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
PTPN6-213ENST00000539365 CDK13Q14004 1512 aaKnown RBP22.26■■□□□ 1.15
PTPN6-213ENST00000539365 RAPGEF3O95398 923 aa22.24■■□□□ 1.15
PTPN6-213ENST00000539365 CLIP1P30622 1438 aa22.23■■□□□ 1.15
PTPN6-213ENST00000539365 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.21■■□□□ 1.15
PTPN6-213ENST00000539365 AKNAQ7Z591 1439 aa22.2■■□□□ 1.14
PTPN6-213ENST00000539365 CASKIN1Q8WXD9 1431 aa22.2■■□□□ 1.14
PTPN6-213ENST00000539365 FANCAO15360 1455 aa22.19■■□□□ 1.14
PTPN6-213ENST00000539365 EFCAB2Q5VUJ9 269 aa22.18■■□□□ 1.14
PTPN6-213ENST00000539365 ADGRL1O94910 1474 aa22.17■■□□□ 1.14
PTPN6-213ENST00000539365 PLCH2O75038 1416 aa22.17■■□□□ 1.14
PTPN6-213ENST00000539365 DENND4BO75064 1496 aaPredicted RBP22.16■■□□□ 1.14
PTPN6-213ENST00000539365 TROQ12816 1431 aaPredicted RBP22.16■■□□□ 1.14
PTPN6-213ENST00000539365 CCDC18Q5T9S5 1454 aa22.14■■□□□ 1.13
PTPN6-213ENST00000539365 TTC37Q6PGP7 1564 aa22.11■■□□□ 1.13
PTPN6-213ENST00000539365 CFAP74Q9C0B2 1584 aa22.11■■□□□ 1.13
PTPN6-213ENST00000539365 FYCO1Q9BQS8 1478 aa22.09■■□□□ 1.13
PTPN6-213ENST00000539365 SCAPERQ9BY12 1400 aa22.08■■□□□ 1.13
PTPN6-213ENST00000539365 ARID4BQ4LE39 1312 aaPredicted RBP22.07■■□□□ 1.12
PTPN6-213ENST00000539365 KIF14Q15058 1648 aa22.06■■□□□ 1.12
PTPN6-213ENST00000539365 PCF11O94913 1555 aaKnown RBP22.05■■□□□ 1.12
PTPN6-213ENST00000539365 MAGI2Q86UL8 1455 aa22.02■■□□□ 1.12
PTPN6-213ENST00000539365 CEP162Q5TB80 1403 aa22.01■■□□□ 1.11
PTPN6-213ENST00000539365 FRMPD1Q5SYB0 1578 aa22■■□□□ 1.11
PTPN6-213ENST00000539365 LOC105371045A0A1W2PR82 267 aa22■■□□□ 1.11
PTPN6-213ENST00000539365 ARHGAP5Q13017 1502 aa22■■□□□ 1.11
PTPN6-213ENST00000539365 MYO5CQ9NQX4 1742 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms