RNA–Protein interactions for RNA: ENST00000539267.5

MFSD4A-208, Transcript of major facilitator superfamily domain containing 4A, humanhuman

TSL 2

Gene MFSD4A, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD4A-208ENST00000539267 RANGAP1P46060 587 aaPredicted RBP29.15■■■□□ 2.26
MFSD4A-208ENST00000539267 CLIP1P30622 1438 aa29.14■■■□□ 2.26
MFSD4A-208ENST00000539267 GRIN2AQ12879 1464 aa29.13■■■□□ 2.25
MFSD4A-208ENST00000539267 CTTNBP2Q8WZ74 1663 aa28.98■■■□□ 2.23
MFSD4A-208ENST00000539267 PPARGC1BQ86YN6 1023 aaKnown RBP28.97■■■□□ 2.23
MFSD4A-208ENST00000539267 CEP170Q5SW79 1584 aa28.96■■■□□ 2.23
MFSD4A-208ENST00000539267 NUP160Q12769 1436 aa28.95■■■□□ 2.22
MFSD4A-208ENST00000539267 CHD1O14646 1710 aa28.93■■■□□ 2.22
MFSD4A-208ENST00000539267 KIAA0586Q9BVV6 1533 aa28.92■■■□□ 2.22
MFSD4A-208ENST00000539267 VPS8Q8N3P4 1428 aa28.91■■■□□ 2.22
MFSD4A-208ENST00000539267 ARHGAP35Q9NRY4 1499 aa28.9■■■□□ 2.22
MFSD4A-208ENST00000539267 IQGAP2Q13576 1575 aa28.88■■■□□ 2.21
MFSD4A-208ENST00000539267 P3H3Q8IVL6 736 aa28.84■■■□□ 2.21
MFSD4A-208ENST00000539267 ARAP1Q96P48 1450 aa28.83■■■□□ 2.21
MFSD4A-208ENST00000539267 UGGT2Q9NYU1 1516 aa28.76■■■□□ 2.19
MFSD4A-208ENST00000539267 JPH4Q96JJ6 628 aa28.75■■■□□ 2.19
MFSD4A-208ENST00000539267 EFCAB5A4FU69 1503 aa28.74■■■□□ 2.19
MFSD4A-208ENST00000539267 FHOD3Q2V2M9 1422 aa28.74■■■□□ 2.19
MFSD4A-208ENST00000539267 SAMD9Q5K651 1589 aa28.72■■■□□ 2.19
MFSD4A-208ENST00000539267 TTBK1Q5TCY1 1321 aaPredicted RBP28.72■■■□□ 2.19
MFSD4A-208ENST00000539267 APLP2Q06481 763 aa28.69■■■□□ 2.18
MFSD4A-208ENST00000539267 DISP1Q96F81 1524 aa28.67■■■□□ 2.18
MFSD4A-208ENST00000539267 CLASP1Q7Z460 1538 aa28.65■■■□□ 2.18
MFSD4A-208ENST00000539267 OSCARQ8IYS5 282 aa28.62■■■□□ 2.17
MFSD4A-208ENST00000539267 KIAA0556O60303 1618 aa28.6■■■□□ 2.17
MFSD4A-208ENST00000539267 HRCP23327 699 aa28.59■■■□□ 2.17
MFSD4A-208ENST00000539267 PRG4Q92954 1404 aaPredicted RBP28.59■■■□□ 2.17
MFSD4A-208ENST00000539267 CARMIL2Q6F5E8 1435 aa28.55■■■□□ 2.16
MFSD4A-208ENST00000539267 SHROOM2Q13796 1616 aa28.55■■■□□ 2.16
MFSD4A-208ENST00000539267 FMN1Q68DA7 1419 aa28.52■■■□□ 2.16
MFSD4A-208ENST00000539267 ERCC6L2Q5T890 1561 aa28.48■■■□□ 2.15
MFSD4A-208ENST00000539267 PCF11O94913 1555 aaKnown RBP28.45■■■□□ 2.15
MFSD4A-208ENST00000539267 ATP1B4Q9UN42 357 aaPredicted RBP28.45■■■□□ 2.15
MFSD4A-208ENST00000539267 CASKIN1Q8WXD9 1431 aa28.44■■■□□ 2.14
MFSD4A-208ENST00000539267 FYCO1Q9BQS8 1478 aa28.38■■■□□ 2.13
MFSD4A-208ENST00000539267 PTPRGP23470 1445 aa28.36■■■□□ 2.13
MFSD4A-208ENST00000539267 KANK4Q5T7N3 995 aaPredicted RBP28.35■■■□□ 2.13
MFSD4A-208ENST00000539267 PLB1Q6P1J6 1458 aa28.33■■■□□ 2.13
MFSD4A-208ENST00000539267 MAP3K1Q13233 1512 aa28.3■■■□□ 2.12
MFSD4A-208ENST00000539267 TIAM1Q13009 1591 aa28.28■■■□□ 2.12
MFSD4A-208ENST00000539267 ARID3CA6NKF2 412 aa28.27■■■□□ 2.12
MFSD4A-208ENST00000539267 RAPGEF6Q8TEU7 1601 aa28.25■■■□□ 2.11
MFSD4A-208ENST00000539267 NUP153P49790 1475 aaKnown RBP28.24■■■□□ 2.11
MFSD4A-208ENST00000539267 HECW1Q76N89 1606 aa28.23■■■□□ 2.11
MFSD4A-208ENST00000539267 ABCA8O94911 1581 aa28.23■■■□□ 2.11
MFSD4A-208ENST00000539267 LRRIQ1Q96JM4 1722 aa28.21■■■□□ 2.11
MFSD4A-208ENST00000539267 EPRSP07814 1512 aaKnown RBP28.2■■■□□ 2.1
MFSD4A-208ENST00000539267 UACAQ9BZF9 1416 aa28.18■■■□□ 2.1
MFSD4A-208ENST00000539267 CDK13Q14004 1512 aaKnown RBP28.18■■■□□ 2.1
MFSD4A-208ENST00000539267 CFAP43Q8NDM7 1665 aa28.17■■■□□ 2.1
MFSD4A-208ENST00000539267 LRRC9Q6ZRR7 1453 aa28.16■■■□□ 2.1
MFSD4A-208ENST00000539267 CCDC18Q5T9S5 1454 aa28.15■■■□□ 2.1
MFSD4A-208ENST00000539267 ARHGEF11O15085 1522 aa28.12■■■□□ 2.09
MFSD4A-208ENST00000539267 ZEB1P37275 1124 aaPredicted RBP28.11■■■□□ 2.09
MFSD4A-208ENST00000539267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.1■■■□□ 2.09
MFSD4A-208ENST00000539267 HNRNPUL2Q1KMD3 747 aaKnown RBP28.1■■■□□ 2.09
MFSD4A-208ENST00000539267 ATP10BO94823 1461 aa28.08■■■□□ 2.09
MFSD4A-208ENST00000539267 ABCC2Q92887 1545 aa28.07■■■□□ 2.08
MFSD4A-208ENST00000539267 RRBP1Q9P2E9 1410 aaKnown RBP28.07■■■□□ 2.08
MFSD4A-208ENST00000539267 MAGI3Q5TCQ9 1506 aa28.06■■■□□ 2.08
MFSD4A-208ENST00000539267 MTUS2Q5JR59 1369 aa28.06■■■□□ 2.08
MFSD4A-208ENST00000539267 UHRF1BP1LA0JNW5 1464 aa28.03■■■□□ 2.08
MFSD4A-208ENST00000539267 CCER1Q8TC90 406 aaPredicted RBP28.01■■■□□ 2.07
MFSD4A-208ENST00000539267 CCNB3Q8WWL7 1395 aa28■■■□□ 2.07
MFSD4A-208ENST00000539267 RIMBP3CA6NJZ7 1639 aa27.99■■■□□ 2.07
MFSD4A-208ENST00000539267 RIMBP3BA6NNM3 1639 aa27.99■■■□□ 2.07
MFSD4A-208ENST00000539267 RIMBP3Q9UFD9 1639 aa27.99■■■□□ 2.07
MFSD4A-208ENST00000539267 CDK11AQ9UQ88 783 aaPredicted RBP27.97■■■□□ 2.07
MFSD4A-208ENST00000539267 ADCY10Q96PN6 1610 aa27.96■■■□□ 2.07
MFSD4A-208ENST00000539267 EHBP1L1Q8N3D4 1523 aa27.96■■■□□ 2.07
MFSD4A-208ENST00000539267 PHLDB1Q86UU1 1377 aa27.94■■■□□ 2.06
MFSD4A-208ENST00000539267 CYB5RLQ6IPT4 315 aa27.93■■■□□ 2.06
MFSD4A-208ENST00000539267 KDM5BQ9UGL1 1544 aa27.93■■■□□ 2.06
MFSD4A-208ENST00000539267 PLEKHD1A6NEE1 506 aa27.91■■■□□ 2.06
MFSD4A-208ENST00000539267 TROQ12816 1431 aaPredicted RBP27.91■■■□□ 2.06
MFSD4A-208ENST00000539267 NCOA2Q15596 1464 aa27.89■■■□□ 2.05
MFSD4A-208ENST00000539267 ZCCHC11Q5TAX3 1644 aaKnown RBP27.87■■■□□ 2.05
MFSD4A-208ENST00000539267 SUPT6HQ7KZ85 1726 aaKnown RBP27.83■■■□□ 2.05
MFSD4A-208ENST00000539267 KIF14Q15058 1648 aa27.78■■■□□ 2.04
MFSD4A-208ENST00000539267 NPM1P06748 294 aaKnown RBP eCLIP27.77■■■□□ 2.04
MFSD4A-208ENST00000539267 ITGAEP38570 1179 aa27.76■■■□□ 2.03
MFSD4A-208ENST00000539267 FAM50AQ14320 339 aaKnown RBP27.76■■■□□ 2.03
MFSD4A-208ENST00000539267 KCNH8Q96L42 1107 aa27.74■■■□□ 2.03
MFSD4A-208ENST00000539267 MYOM3Q5VTT5 1437 aa27.74■■■□□ 2.03
MFSD4A-208ENST00000539267 FGD6Q6ZV73 1430 aa27.71■■■□□ 2.03
MFSD4A-208ENST00000539267 ASXL2Q76L83 1435 aa27.7■■■□□ 2.03
MFSD4A-208ENST00000539267 ABCC10Q5T3U5 1492 aa27.7■■■□□ 2.02
MFSD4A-208ENST00000539267 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.69■■■□□ 2.02
MFSD4A-208ENST00000539267 WDR7Q9Y4E6 1490 aa27.68■■■□□ 2.02
MFSD4A-208ENST00000539267 GPATCH8Q9UKJ3 1502 aaKnown RBP27.65■■■□□ 2.02
MFSD4A-208ENST00000539267 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.62■■■□□ 2.01
MFSD4A-208ENST00000539267 MIA2Q96PC5 1412 aa27.6■■■□□ 2.01
MFSD4A-208ENST00000539267 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
MFSD4A-208ENST00000539267 TTC37Q6PGP7 1564 aa27.58■■■□□ 2.01
MFSD4A-208ENST00000539267 CFDP1Q9UEE9 299 aaPredicted RBP27.58■■■□□ 2.01
MFSD4A-208ENST00000539267 ZNF644Q9H582 1327 aaPredicted RBP27.57■■■□□ 2
MFSD4A-208ENST00000539267 PTPN23Q9H3S7 1636 aa27.55■■■□□ 2
MFSD4A-208ENST00000539267 TCOF1Q13428 1488 aaKnown RBP27.53■■■□□ 2
MFSD4A-208ENST00000539267 MAPKBP1O60336 1514 aa27.53■■■□□ 2
MFSD4A-208ENST00000539267 ZNF777Q9ULD5 760 aaPredicted RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms