RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 PRXQ9BXM0 1461 aa25.38■■□□□ 1.65
PRPF19-203ENST00000539180 EEA1Q15075 1411 aa25.37■■□□□ 1.65
PRPF19-203ENST00000539180 ERCC6L2Q5T890 1561 aa25.37■■□□□ 1.65
PRPF19-203ENST00000539180 KIAA0586Q9BVV6 1533 aa25.37■■□□□ 1.65
PRPF19-203ENST00000539180 CTTNBP2Q8WZ74 1663 aa25.31■■□□□ 1.64
PRPF19-203ENST00000539180 IQGAP2Q13576 1575 aa25.3■■□□□ 1.64
PRPF19-203ENST00000539180 PRG4Q92954 1404 aaPredicted RBP25.22■■□□□ 1.63
PRPF19-203ENST00000539180 KIF21BO75037 1637 aa25.21■■□□□ 1.63
PRPF19-203ENST00000539180 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
PRPF19-203ENST00000539180 JPH4Q96JJ6 628 aa25.18■■□□□ 1.62
PRPF19-203ENST00000539180 UGGT2Q9NYU1 1516 aa25.17■■□□□ 1.62
PRPF19-203ENST00000539180 CYB5RLQ6IPT4 315 aa25.13■■□□□ 1.61
PRPF19-203ENST00000539180 DISP1Q96F81 1524 aa25.1■■□□□ 1.61
PRPF19-203ENST00000539180 KIAA0556O60303 1618 aa25.08■■□□□ 1.61
PRPF19-203ENST00000539180 FAM9AQ8IZU1 332 aaPredicted RBP25.03■■□□□ 1.6
PRPF19-203ENST00000539180 CARMIL2Q6F5E8 1435 aa25.02■■□□□ 1.6
PRPF19-203ENST00000539180 ADCY10Q96PN6 1610 aa24.97■■□□□ 1.59
PRPF19-203ENST00000539180 SAMD9Q5K651 1589 aa24.97■■□□□ 1.59
PRPF19-203ENST00000539180 GOLGA3Q08378 1498 aa24.96■■□□□ 1.59
PRPF19-203ENST00000539180 TNIKQ9UKE5 1360 aa24.95■■□□□ 1.59
PRPF19-203ENST00000539180 PTPRGP23470 1445 aa24.89■■□□□ 1.58
PRPF19-203ENST00000539180 UHRF1BP1LA0JNW5 1464 aa24.83■■□□□ 1.57
PRPF19-203ENST00000539180 EFCAB5A4FU69 1503 aa24.83■■□□□ 1.57
PRPF19-203ENST00000539180 ABCC2Q92887 1545 aa24.83■■□□□ 1.57
PRPF19-203ENST00000539180 MAPKBP1O60336 1514 aa24.8■■□□□ 1.56
PRPF19-203ENST00000539180 ABCA8O94911 1581 aa24.8■■□□□ 1.56
PRPF19-203ENST00000539180 UACAQ9BZF9 1416 aa24.78■■□□□ 1.56
PRPF19-203ENST00000539180 PLB1Q6P1J6 1458 aa24.73■■□□□ 1.55
PRPF19-203ENST00000539180 KDM5BQ9UGL1 1544 aa24.71■■□□□ 1.55
PRPF19-203ENST00000539180 ZCCHC11Q5TAX3 1644 aaKnown RBP24.71■■□□□ 1.55
PRPF19-203ENST00000539180 KIF13AQ9H1H9 1805 aa24.7■■□□□ 1.55
PRPF19-203ENST00000539180 FHOD3Q2V2M9 1422 aa24.69■■□□□ 1.54
PRPF19-203ENST00000539180 TTBK1Q5TCY1 1321 aaPredicted RBP24.68■■□□□ 1.54
PRPF19-203ENST00000539180 ARHGAP35Q9NRY4 1499 aa24.67■■□□□ 1.54
PRPF19-203ENST00000539180 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
PRPF19-203ENST00000539180 RAPGEF6Q8TEU7 1601 aa24.67■■□□□ 1.54
PRPF19-203ENST00000539180 DIP2BQ9P265 1576 aa24.66■■□□□ 1.54
PRPF19-203ENST00000539180 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
PRPF19-203ENST00000539180 P3H3Q8IVL6 736 aa24.61■■□□□ 1.53
PRPF19-203ENST00000539180 ABCC10Q5T3U5 1492 aa24.6■■□□□ 1.53
PRPF19-203ENST00000539180 NPM1P06748 294 aaKnown RBP eCLIP24.57■■□□□ 1.52
PRPF19-203ENST00000539180 ASXL2Q76L83 1435 aa24.56■■□□□ 1.52
PRPF19-203ENST00000539180 RANGAP1P46060 587 aaPredicted RBP24.56■■□□□ 1.52
PRPF19-203ENST00000539180 NUP153P49790 1475 aaKnown RBP24.55■■□□□ 1.52
PRPF19-203ENST00000539180 TRHP20396 242 aaPredicted RBP24.54■■□□□ 1.52
PRPF19-203ENST00000539180 GLI2P10070 1586 aa24.51■■□□□ 1.51
PRPF19-203ENST00000539180 FMN1Q68DA7 1419 aa24.49■■□□□ 1.51
PRPF19-203ENST00000539180 ATP10BO94823 1461 aa24.49■■□□□ 1.51
PRPF19-203ENST00000539180 WDR7Q9Y4E6 1490 aa24.49■■□□□ 1.51
PRPF19-203ENST00000539180 HECW1Q76N89 1606 aa24.47■■□□□ 1.51
PRPF19-203ENST00000539180 EPRSP07814 1512 aaKnown RBP24.46■■□□□ 1.51
PRPF19-203ENST00000539180 CLIP1P30622 1438 aa24.46■■□□□ 1.51
PRPF19-203ENST00000539180 PCF11O94913 1555 aaKnown RBP24.44■■□□□ 1.5
PRPF19-203ENST00000539180 LRRIQ1Q96JM4 1722 aa24.44■■□□□ 1.5
PRPF19-203ENST00000539180 MAP3K4Q9Y6R4 1608 aa24.43■■□□□ 1.5
PRPF19-203ENST00000539180 PPRC1Q5VV67 1664 aaKnown RBP24.42■■□□□ 1.5
PRPF19-203ENST00000539180 CEP162Q5TB80 1403 aa24.4■■□□□ 1.5
PRPF19-203ENST00000539180 CDK13Q14004 1512 aaKnown RBP24.38■■□□□ 1.49
PRPF19-203ENST00000539180 CFAP43Q8NDM7 1665 aa24.37■■□□□ 1.49
PRPF19-203ENST00000539180 FAM69CQ0P6D2 419 aa24.37■■□□□ 1.49
PRPF19-203ENST00000539180 TSPOAP1O95153 1857 aa24.36■■□□□ 1.49
PRPF19-203ENST00000539180 CASKIN1Q8WXD9 1431 aa24.34■■□□□ 1.49
PRPF19-203ENST00000539180 FYCO1Q9BQS8 1478 aa24.33■■□□□ 1.49
PRPF19-203ENST00000539180 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
PRPF19-203ENST00000539180 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
PRPF19-203ENST00000539180 LOC105371045A0A1W2PR82 267 aa24.29■■□□□ 1.48
PRPF19-203ENST00000539180 CCDC18Q5T9S5 1454 aa24.26■■□□□ 1.47
PRPF19-203ENST00000539180 MAGI3Q5TCQ9 1506 aa24.23■■□□□ 1.47
PRPF19-203ENST00000539180 TTC37Q6PGP7 1564 aa24.2■■□□□ 1.47
PRPF19-203ENST00000539180 TEX14Q8IWB6 1497 aa24.2■■□□□ 1.47
PRPF19-203ENST00000539180 KDM6BO15054 1643 aa24.19■■□□□ 1.46
PRPF19-203ENST00000539180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.19■■□□□ 1.46
PRPF19-203ENST00000539180 CD109Q6YHK3 1445 aa24.17■■□□□ 1.46
PRPF19-203ENST00000539180 KIF14Q15058 1648 aa24.17■■□□□ 1.46
PRPF19-203ENST00000539180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.16■■□□□ 1.46
PRPF19-203ENST00000539180 HNRNPUL2Q1KMD3 747 aaKnown RBP24.16■■□□□ 1.46
PRPF19-203ENST00000539180 TROQ12816 1431 aaPredicted RBP24.15■■□□□ 1.46
PRPF19-203ENST00000539180 KCNH8Q96L42 1107 aa24.14■■□□□ 1.45
PRPF19-203ENST00000539180 VPS8Q8N3P4 1428 aa24.13■■□□□ 1.45
PRPF19-203ENST00000539180 PLEKHD1A6NEE1 506 aa24.12■■□□□ 1.45
PRPF19-203ENST00000539180 ATP1B4Q9UN42 357 aaPredicted RBP24.1■■□□□ 1.45
PRPF19-203ENST00000539180 MYO5CQ9NQX4 1742 aa24.09■■□□□ 1.45
PRPF19-203ENST00000539180 CFAP74Q9C0B2 1584 aa24.07■■□□□ 1.44
PRPF19-203ENST00000539180 COL17A1Q9UMD9 1497 aaPredicted RBP24.06■■□□□ 1.44
PRPF19-203ENST00000539180 ARAP3Q8WWN8 1544 aa24.05■■□□□ 1.44
PRPF19-203ENST00000539180 CDK11AQ9UQ88 783 aaPredicted RBP24.04■■□□□ 1.44
PRPF19-203ENST00000539180 NEO1Q92859 1461 aa24.04■■□□□ 1.44
PRPF19-203ENST00000539180 TIAM1Q13009 1591 aa24.03■■□□□ 1.44
PRPF19-203ENST00000539180 EHBP1L1Q8N3D4 1523 aa24.02■■□□□ 1.44
PRPF19-203ENST00000539180 PREX2Q70Z35 1606 aa24.02■■□□□ 1.44
PRPF19-203ENST00000539180 CDC42BPAQ5VT25 1732 aa23.98■■□□□ 1.43
PRPF19-203ENST00000539180 CDC42BPBQ9Y5S2 1711 aa23.98■■□□□ 1.43
PRPF19-203ENST00000539180 FANCAO15360 1455 aa23.97■■□□□ 1.43
PRPF19-203ENST00000539180 PLCH2O75038 1416 aa23.97■■□□□ 1.43
PRPF19-203ENST00000539180 FRMPD1Q5SYB0 1578 aa23.97■■□□□ 1.43
PRPF19-203ENST00000539180 MAP3K1Q13233 1512 aa23.96■■□□□ 1.43
PRPF19-203ENST00000539180 PHLDB1Q86UU1 1377 aa23.95■■□□□ 1.42
PRPF19-203ENST00000539180 RICTORQ6R327 1708 aa23.93■■□□□ 1.42
PRPF19-203ENST00000539180 MTUS2Q5JR59 1369 aa23.9■■□□□ 1.42
PRPF19-203ENST00000539180 AKNAQ7Z591 1439 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms