RNA–Protein interactions for RNA: ENST00000539067.5

CRX-202, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRX, Length 2,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-202ENST00000539067 RAPGEF2Q9Y4G8 1499 aa19.39■□□□□ 0.69
CRX-202ENST00000539067 CEP162Q5TB80 1403 aa19.38■□□□□ 0.69
CRX-202ENST00000539067 CEP170Q5SW79 1584 aa19.33■□□□□ 0.68
CRX-202ENST00000539067 HRCP23327 699 aa19.29■□□□□ 0.68
CRX-202ENST00000539067 NUP160Q12769 1436 aa19.28■□□□□ 0.68
CRX-202ENST00000539067 CLASP1Q7Z460 1538 aa19.24■□□□□ 0.67
CRX-202ENST00000539067 CLIP1P30622 1438 aa19.21■□□□□ 0.67
CRX-202ENST00000539067 RANGAP1P46060 587 aaPredicted RBP19.19■□□□□ 0.66
CRX-202ENST00000539067 JPH4Q96JJ6 628 aa19.17■□□□□ 0.66
CRX-202ENST00000539067 KIAA0586Q9BVV6 1533 aa19.16■□□□□ 0.66
CRX-202ENST00000539067 ERCC6L2Q5T890 1561 aa19.13■□□□□ 0.65
CRX-202ENST00000539067 PCGF6Q9BYE7 350 aa19.12■□□□□ 0.65
CRX-202ENST00000539067 CTTNBP2Q8WZ74 1663 aa19.12■□□□□ 0.65
CRX-202ENST00000539067 IQGAP2Q13576 1575 aa19.11■□□□□ 0.65
CRX-202ENST00000539067 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
CRX-202ENST00000539067 PRG4Q92954 1404 aaPredicted RBP19.1■□□□□ 0.65
CRX-202ENST00000539067 TRIM26Q12899 539 aaPredicted RBP19.09■□□□□ 0.65
CRX-202ENST00000539067 TTBK1Q5TCY1 1321 aaPredicted RBP19.09■□□□□ 0.65
CRX-202ENST00000539067 RIMBP3CA6NJZ7 1639 aa19.08■□□□□ 0.65
CRX-202ENST00000539067 RIMBP3BA6NNM3 1639 aa19.08■□□□□ 0.65
CRX-202ENST00000539067 RIMBP3Q9UFD9 1639 aa19.08■□□□□ 0.65
CRX-202ENST00000539067 SHROOM2Q13796 1616 aa19.08■□□□□ 0.64
CRX-202ENST00000539067 VPS8Q8N3P4 1428 aa19.06■□□□□ 0.64
CRX-202ENST00000539067 P3H3Q8IVL6 736 aa19.04■□□□□ 0.64
CRX-202ENST00000539067 CYB5RLQ6IPT4 315 aa19.02■□□□□ 0.64
CRX-202ENST00000539067 PPARGC1BQ86YN6 1023 aaKnown RBP19.02■□□□□ 0.64
CRX-202ENST00000539067 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
CRX-202ENST00000539067 DISP1Q96F81 1524 aa19■□□□□ 0.63
CRX-202ENST00000539067 UGGT2Q9NYU1 1516 aa18.99■□□□□ 0.63
CRX-202ENST00000539067 ARHGAP35Q9NRY4 1499 aa18.98■□□□□ 0.63
CRX-202ENST00000539067 CARMIL2Q6F5E8 1435 aa18.95■□□□□ 0.62
CRX-202ENST00000539067 KIAA0556O60303 1618 aa18.93■□□□□ 0.62
CRX-202ENST00000539067 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
CRX-202ENST00000539067 FHOD3Q2V2M9 1422 aa18.89■□□□□ 0.62
CRX-202ENST00000539067 PTPRGP23470 1445 aa18.89■□□□□ 0.61
CRX-202ENST00000539067 SAMD9Q5K651 1589 aa18.88■□□□□ 0.61
CRX-202ENST00000539067 APLP2Q06481 763 aa18.87■□□□□ 0.61
CRX-202ENST00000539067 ARID3CA6NKF2 412 aa18.8■□□□□ 0.6
CRX-202ENST00000539067 PLB1Q6P1J6 1458 aa18.8■□□□□ 0.6
CRX-202ENST00000539067 ADCY10Q96PN6 1610 aa18.75■□□□□ 0.59
CRX-202ENST00000539067 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
CRX-202ENST00000539067 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
CRX-202ENST00000539067 PCF11O94913 1555 aaKnown RBP18.73■□□□□ 0.59
CRX-202ENST00000539067 MAP3K1Q13233 1512 aa18.71■□□□□ 0.59
CRX-202ENST00000539067 FMN1Q68DA7 1419 aa18.7■□□□□ 0.58
CRX-202ENST00000539067 ABCA8O94911 1581 aa18.7■□□□□ 0.58
CRX-202ENST00000539067 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
CRX-202ENST00000539067 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
CRX-202ENST00000539067 ABCC2Q92887 1545 aa18.69■□□□□ 0.58
CRX-202ENST00000539067 CASKIN1Q8WXD9 1431 aa18.67■□□□□ 0.58
CRX-202ENST00000539067 CFAP43Q8NDM7 1665 aa18.67■□□□□ 0.58
CRX-202ENST00000539067 RAPGEF6Q8TEU7 1601 aa18.67■□□□□ 0.58
CRX-202ENST00000539067 NPM1P06748 294 aaKnown RBP eCLIP18.66■□□□□ 0.58
CRX-202ENST00000539067 UHRF1BP1LA0JNW5 1464 aa18.65■□□□□ 0.58
CRX-202ENST00000539067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.64■□□□□ 0.57
CRX-202ENST00000539067 HNRNPUL2Q1KMD3 747 aaKnown RBP18.64■□□□□ 0.57
CRX-202ENST00000539067 NUP153P49790 1475 aaKnown RBP18.63■□□□□ 0.57
CRX-202ENST00000539067 KANK4Q5T7N3 995 aaPredicted RBP18.63■□□□□ 0.57
CRX-202ENST00000539067 ZCCHC11Q5TAX3 1644 aaKnown RBP18.6■□□□□ 0.57
CRX-202ENST00000539067 ATP10BO94823 1461 aa18.59■□□□□ 0.57
CRX-202ENST00000539067 KDM5BQ9UGL1 1544 aa18.59■□□□□ 0.57
CRX-202ENST00000539067 CDK13Q14004 1512 aaKnown RBP18.58■□□□□ 0.57
CRX-202ENST00000539067 LRRC9Q6ZRR7 1453 aa18.58■□□□□ 0.56
CRX-202ENST00000539067 LRRIQ1Q96JM4 1722 aa18.56■□□□□ 0.56
CRX-202ENST00000539067 HECW1Q76N89 1606 aa18.55■□□□□ 0.56
CRX-202ENST00000539067 TRHP20396 242 aaPredicted RBP18.54■□□□□ 0.56
CRX-202ENST00000539067 ASXL2Q76L83 1435 aa18.54■□□□□ 0.56
CRX-202ENST00000539067 EPRSP07814 1512 aaKnown RBP18.54■□□□□ 0.56
CRX-202ENST00000539067 KCNH8Q96L42 1107 aa18.53■□□□□ 0.56
CRX-202ENST00000539067 MAPKBP1O60336 1514 aa18.5■□□□□ 0.55
CRX-202ENST00000539067 RRBP1Q9P2E9 1410 aaKnown RBP18.5■□□□□ 0.55
CRX-202ENST00000539067 CCDC18Q5T9S5 1454 aa18.49■□□□□ 0.55
CRX-202ENST00000539067 FAM69CQ0P6D2 419 aa18.47■□□□□ 0.55
CRX-202ENST00000539067 PLEKHD1A6NEE1 506 aa18.46■□□□□ 0.55
CRX-202ENST00000539067 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.55
CRX-202ENST00000539067 CCNB3Q8WWL7 1395 aa18.43■□□□□ 0.54
CRX-202ENST00000539067 EHBP1L1Q8N3D4 1523 aa18.43■□□□□ 0.54
CRX-202ENST00000539067 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
CRX-202ENST00000539067 MAGI3Q5TCQ9 1506 aa18.42■□□□□ 0.54
CRX-202ENST00000539067 ABCC10Q5T3U5 1492 aa18.42■□□□□ 0.54
CRX-202ENST00000539067 DIP2BQ9P265 1576 aa18.41■□□□□ 0.54
CRX-202ENST00000539067 KIF13AQ9H1H9 1805 aa18.41■□□□□ 0.54
CRX-202ENST00000539067 PHLDB1Q86UU1 1377 aa18.4■□□□□ 0.54
CRX-202ENST00000539067 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
CRX-202ENST00000539067 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
CRX-202ENST00000539067 SUPT6HQ7KZ85 1726 aaKnown RBP18.38■□□□□ 0.53
CRX-202ENST00000539067 TROQ12816 1431 aaPredicted RBP18.36■□□□□ 0.53
CRX-202ENST00000539067 KIF14Q15058 1648 aa18.35■□□□□ 0.53
CRX-202ENST00000539067 TSPOAP1O95153 1857 aa18.35■□□□□ 0.53
CRX-202ENST00000539067 NCOA2Q15596 1464 aa18.33■□□□□ 0.52
CRX-202ENST00000539067 CCER1Q8TC90 406 aaPredicted RBP18.32■□□□□ 0.52
CRX-202ENST00000539067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.31■□□□□ 0.52
CRX-202ENST00000539067 TTC37Q6PGP7 1564 aa18.31■□□□□ 0.52
CRX-202ENST00000539067 GLI2P10070 1586 aa18.29■□□□□ 0.52
CRX-202ENST00000539067 CD109Q6YHK3 1445 aa18.29■□□□□ 0.52
CRX-202ENST00000539067 FGD6Q6ZV73 1430 aa18.28■□□□□ 0.52
CRX-202ENST00000539067 MYOM3Q5VTT5 1437 aa18.27■□□□□ 0.52
CRX-202ENST00000539067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.52
CRX-202ENST00000539067 MAP3K4Q9Y6R4 1608 aa18.27■□□□□ 0.52
CRX-202ENST00000539067 ABCA9Q8IUA7 1624 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms