RNA–Protein interactions for RNA: ENST00000539030.5

SCNN1A-213, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 315 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-213ENST00000539030 UBTFP17480 764 aaKnown RBP11.4□□□□□ -0.58
SCNN1A-213ENST00000539030 ARHGEF11O15085 1522 aa11.4□□□□□ -0.59
SCNN1A-213ENST00000539030 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
SCNN1A-213ENST00000539030 EHMT2Q96KQ7 1210 aa11.38□□□□□ -0.59
SCNN1A-213ENST00000539030 LOC105371045A0A1W2PR82 267 aa11.36□□□□□ -0.59
SCNN1A-213ENST00000539030 ILDR1Q86SU0 546 aaPredicted RBP11.36□□□□□ -0.59
SCNN1A-213ENST00000539030 NUP160Q12769 1436 aa11.35□□□□□ -0.59
SCNN1A-213ENST00000539030 TNIKQ9UKE5 1360 aa11.34□□□□□ -0.59
SCNN1A-213ENST00000539030 CHD1O14646 1710 aa11.34□□□□□ -0.59
SCNN1A-213ENST00000539030 KIAA0586Q9BVV6 1533 aa11.33□□□□□ -0.6
SCNN1A-213ENST00000539030 CEP170Q5SW79 1584 aa11.31□□□□□ -0.6
SCNN1A-213ENST00000539030 IQGAP2Q13576 1575 aa11.28□□□□□ -0.6
SCNN1A-213ENST00000539030 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.6
SCNN1A-213ENST00000539030 JPH4Q96JJ6 628 aa11.27□□□□□ -0.61
SCNN1A-213ENST00000539030 CLASP1Q7Z460 1538 aa11.26□□□□□ -0.61
SCNN1A-213ENST00000539030 UGGT2Q9NYU1 1516 aa11.24□□□□□ -0.61
SCNN1A-213ENST00000539030 RANGAP1P46060 587 aaPredicted RBP11.23□□□□□ -0.61
SCNN1A-213ENST00000539030 CLIP1P30622 1438 aa11.23□□□□□ -0.61
SCNN1A-213ENST00000539030 CEP162Q5TB80 1403 aa11.23□□□□□ -0.61
SCNN1A-213ENST00000539030 CARMIL2Q6F5E8 1435 aa11.23□□□□□ -0.61
SCNN1A-213ENST00000539030 EFCAB5A4FU69 1503 aa11.21□□□□□ -0.61
SCNN1A-213ENST00000539030 CYB5RLQ6IPT4 315 aa11.21□□□□□ -0.61
SCNN1A-213ENST00000539030 PRG4Q92954 1404 aaPredicted RBP11.2□□□□□ -0.62
SCNN1A-213ENST00000539030 SHROOM2Q13796 1616 aa11.2□□□□□ -0.62
SCNN1A-213ENST00000539030 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
SCNN1A-213ENST00000539030 DISP1Q96F81 1524 aa11.18□□□□□ -0.62
SCNN1A-213ENST00000539030 ARHGAP35Q9NRY4 1499 aa11.18□□□□□ -0.62
SCNN1A-213ENST00000539030 SAMD9Q5K651 1589 aa11.17□□□□□ -0.62
SCNN1A-213ENST00000539030 P3H3Q8IVL6 736 aa11.17□□□□□ -0.62
SCNN1A-213ENST00000539030 KIAA0556O60303 1618 aa11.16□□□□□ -0.62
SCNN1A-213ENST00000539030 FHOD3Q2V2M9 1422 aa11.14□□□□□ -0.63
SCNN1A-213ENST00000539030 PTPRGP23470 1445 aa11.13□□□□□ -0.63
SCNN1A-213ENST00000539030 FMN1Q68DA7 1419 aa11.13□□□□□ -0.63
SCNN1A-213ENST00000539030 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
SCNN1A-213ENST00000539030 TTBK1Q5TCY1 1321 aaPredicted RBP11.1□□□□□ -0.63
SCNN1A-213ENST00000539030 VPS8Q8N3P4 1428 aa11.09□□□□□ -0.63
SCNN1A-213ENST00000539030 CASKIN1Q8WXD9 1431 aa11.05□□□□□ -0.64
SCNN1A-213ENST00000539030 UACAQ9BZF9 1416 aa11.05□□□□□ -0.64
SCNN1A-213ENST00000539030 ATP1B4Q9UN42 357 aaPredicted RBP11.04□□□□□ -0.64
SCNN1A-213ENST00000539030 APLP2Q06481 763 aa11.03□□□□□ -0.64
SCNN1A-213ENST00000539030 PLB1Q6P1J6 1458 aa11.03□□□□□ -0.64
SCNN1A-213ENST00000539030 FYCO1Q9BQS8 1478 aa11.03□□□□□ -0.64
SCNN1A-213ENST00000539030 ABCA8O94911 1581 aa11.03□□□□□ -0.64
SCNN1A-213ENST00000539030 UHRF1BP1LA0JNW5 1464 aa11.02□□□□□ -0.65
SCNN1A-213ENST00000539030 RAPGEF6Q8TEU7 1601 aa11.02□□□□□ -0.65
SCNN1A-213ENST00000539030 ABCC2Q92887 1545 aa11.01□□□□□ -0.65
SCNN1A-213ENST00000539030 HECW1Q76N89 1606 aa11.01□□□□□ -0.65
SCNN1A-213ENST00000539030 PCF11O94913 1555 aaKnown RBP11□□□□□ -0.65
SCNN1A-213ENST00000539030 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
SCNN1A-213ENST00000539030 NUP153P49790 1475 aaKnown RBP10.99□□□□□ -0.65
SCNN1A-213ENST00000539030 CCDC18Q5T9S5 1454 aa10.99□□□□□ -0.65
SCNN1A-213ENST00000539030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.98□□□□□ -0.65
SCNN1A-213ENST00000539030 HNRNPUL2Q1KMD3 747 aaKnown RBP10.98□□□□□ -0.65
SCNN1A-213ENST00000539030 CDK11AQ9UQ88 783 aaPredicted RBP10.98□□□□□ -0.65
SCNN1A-213ENST00000539030 EPRSP07814 1512 aaKnown RBP10.97□□□□□ -0.65
SCNN1A-213ENST00000539030 KDM5BQ9UGL1 1544 aa10.96□□□□□ -0.65
SCNN1A-213ENST00000539030 MAP3K1Q13233 1512 aa10.95□□□□□ -0.66
SCNN1A-213ENST00000539030 ATP10BO94823 1461 aa10.95□□□□□ -0.66
SCNN1A-213ENST00000539030 ARID3CA6NKF2 412 aa10.95□□□□□ -0.66
SCNN1A-213ENST00000539030 ADCY10Q96PN6 1610 aa10.95□□□□□ -0.66
SCNN1A-213ENST00000539030 PLEKHD1A6NEE1 506 aa10.94□□□□□ -0.66
SCNN1A-213ENST00000539030 TIAM1Q13009 1591 aa10.92□□□□□ -0.66
SCNN1A-213ENST00000539030 CDK13Q14004 1512 aaKnown RBP10.92□□□□□ -0.66
SCNN1A-213ENST00000539030 MTUS2Q5JR59 1369 aa10.91□□□□□ -0.66
SCNN1A-213ENST00000539030 ZCCHC11Q5TAX3 1644 aaKnown RBP10.9□□□□□ -0.66
SCNN1A-213ENST00000539030 CFAP43Q8NDM7 1665 aa10.89□□□□□ -0.67
SCNN1A-213ENST00000539030 LRRC9Q6ZRR7 1453 aa10.89□□□□□ -0.67
SCNN1A-213ENST00000539030 TROQ12816 1431 aaPredicted RBP10.89□□□□□ -0.67
SCNN1A-213ENST00000539030 KANK4Q5T7N3 995 aaPredicted RBP10.88□□□□□ -0.67
SCNN1A-213ENST00000539030 LRRIQ1Q96JM4 1722 aa10.87□□□□□ -0.67
SCNN1A-213ENST00000539030 ASXL2Q76L83 1435 aa10.87□□□□□ -0.67
SCNN1A-213ENST00000539030 EHBP1L1Q8N3D4 1523 aa10.87□□□□□ -0.67
SCNN1A-213ENST00000539030 WDR7Q9Y4E6 1490 aa10.87□□□□□ -0.67
SCNN1A-213ENST00000539030 MAPKBP1O60336 1514 aa10.86□□□□□ -0.67
SCNN1A-213ENST00000539030 KCNH8Q96L42 1107 aa10.85□□□□□ -0.67
SCNN1A-213ENST00000539030 LMTK3Q96Q04 1460 aa10.84□□□□□ -0.67
SCNN1A-213ENST00000539030 KIF13AQ9H1H9 1805 aa10.84□□□□□ -0.67
SCNN1A-213ENST00000539030 MAGI3Q5TCQ9 1506 aa10.84□□□□□ -0.67
SCNN1A-213ENST00000539030 PPARGC1BQ86YN6 1023 aaKnown RBP10.83□□□□□ -0.68
SCNN1A-213ENST00000539030 FBXO41Q8TF61 875 aa10.82□□□□□ -0.68
SCNN1A-213ENST00000539030 KIF14Q15058 1648 aa10.82□□□□□ -0.68
SCNN1A-213ENST00000539030 KDM4FA0A1W2PPD8 638 aa10.81□□□□□ -0.68
SCNN1A-213ENST00000539030 HECW2Q9P2P5 1572 aa10.81□□□□□ -0.68
SCNN1A-213ENST00000539030 SUPT6HQ7KZ85 1726 aaKnown RBP10.81□□□□□ -0.68
SCNN1A-213ENST00000539030 NCOA2Q15596 1464 aa10.81□□□□□ -0.68
SCNN1A-213ENST00000539030 ABCC10Q5T3U5 1492 aa10.8□□□□□ -0.68
SCNN1A-213ENST00000539030 CCNB3Q8WWL7 1395 aa10.79□□□□□ -0.68
SCNN1A-213ENST00000539030 FAM69CQ0P6D2 419 aa10.79□□□□□ -0.68
SCNN1A-213ENST00000539030 GLI2P10070 1586 aa10.77□□□□□ -0.68
SCNN1A-213ENST00000539030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.77□□□□□ -0.69
SCNN1A-213ENST00000539030 ABCA9Q8IUA7 1624 aa10.76□□□□□ -0.69
SCNN1A-213ENST00000539030 PHLDB1Q86UU1 1377 aa10.76□□□□□ -0.69
SCNN1A-213ENST00000539030 MYOM3Q5VTT5 1437 aa10.75□□□□□ -0.69
SCNN1A-213ENST00000539030 CD109Q6YHK3 1445 aa10.75□□□□□ -0.69
SCNN1A-213ENST00000539030 DIP2BQ9P265 1576 aa10.75□□□□□ -0.69
SCNN1A-213ENST00000539030 CFDP1Q9UEE9 299 aaPredicted RBP10.75□□□□□ -0.69
SCNN1A-213ENST00000539030 PLCH2O75038 1416 aa10.75□□□□□ -0.69
SCNN1A-213ENST00000539030 MIA2Q96PC5 1412 aa10.75□□□□□ -0.69
SCNN1A-213ENST00000539030 GPATCH8Q9UKJ3 1502 aaKnown RBP10.74□□□□□ -0.69
SCNN1A-213ENST00000539030 SOCS7O14512 581 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms