RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 WDR62O43379 1518 aa21.67■■□□□ 1.06
ACTN1-205ENST00000538545 HNRNPUL2Q1KMD3 747 aaKnown RBP21.66■■□□□ 1.06
ACTN1-205ENST00000538545 FHOD3Q2V2M9 1422 aa21.66■■□□□ 1.06
ACTN1-205ENST00000538545 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
ACTN1-205ENST00000538545 THOC2Q8NI27 1593 aaKnown RBP21.6■■□□□ 1.05
ACTN1-205ENST00000538545 CTTNBP2Q8WZ74 1663 aa21.59■■□□□ 1.05
ACTN1-205ENST00000538545 IFT140Q96RY7 1462 aa21.57■■□□□ 1.04
ACTN1-205ENST00000538545 CCER1Q8TC90 406 aaPredicted RBP21.54■■□□□ 1.04
ACTN1-205ENST00000538545 GRIN2BQ13224 1484 aa21.53■■□□□ 1.04
ACTN1-205ENST00000538545 FBLN2P98095 1184 aa21.51■■□□□ 1.03
ACTN1-205ENST00000538545 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
ACTN1-205ENST00000538545 FHAD1B1AJZ9 1412 aa21.51■■□□□ 1.03
ACTN1-205ENST00000538545 ADAMTS12P58397 1594 aa21.49■■□□□ 1.03
ACTN1-205ENST00000538545 SNAPC4Q5SXM2 1469 aa21.49■■□□□ 1.03
ACTN1-205ENST00000538545 PCF11O94913 1555 aaKnown RBP21.49■■□□□ 1.03
ACTN1-205ENST00000538545 ITGAEP38570 1179 aa21.43■■□□□ 1.02
ACTN1-205ENST00000538545 ARID3CA6NKF2 412 aa21.43■■□□□ 1.02
ACTN1-205ENST00000538545 TIAM1Q13009 1591 aa21.41■■□□□ 1.02
ACTN1-205ENST00000538545 EFCAB5A4FU69 1503 aa21.4■■□□□ 1.02
ACTN1-205ENST00000538545 CHMP7Q8WUX9 453 aaPredicted RBP21.39■■□□□ 1.01
ACTN1-205ENST00000538545 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
ACTN1-205ENST00000538545 IQGAP2Q13576 1575 aa21.35■■□□□ 1.01
ACTN1-205ENST00000538545 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
ACTN1-205ENST00000538545 LRRC9Q6ZRR7 1453 aa21.34■■□□□ 1.01
ACTN1-205ENST00000538545 GRIN2AQ12879 1464 aa21.33■■□□□ 1
ACTN1-205ENST00000538545 CASKIN1Q8WXD9 1431 aa21.32■■□□□ 1
ACTN1-205ENST00000538545 PHLDB1Q86UU1 1377 aa21.31■■□□□ 1
ACTN1-205ENST00000538545 FMN1Q68DA7 1419 aa21.31■■□□□ 1
ACTN1-205ENST00000538545 FYCO1Q9BQS8 1478 aa21.29■■□□□ 1
ACTN1-205ENST00000538545 LRRIQ1Q96JM4 1722 aa21.29■■□□□ 1
ACTN1-205ENST00000538545 CCNB3Q8WWL7 1395 aa21.27■■□□□ 1
ACTN1-205ENST00000538545 CFAP43Q8NDM7 1665 aa21.26■□□□□ 0.99
ACTN1-205ENST00000538545 RRBP1Q9P2E9 1410 aaKnown RBP21.26■□□□□ 0.99
ACTN1-205ENST00000538545 FAM50AQ14320 339 aaKnown RBP21.26■□□□□ 0.99
ACTN1-205ENST00000538545 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
ACTN1-205ENST00000538545 SYNJ2O15056 1496 aa21.23■□□□□ 0.99
ACTN1-205ENST00000538545 CEP170Q5SW79 1584 aa21.23■□□□□ 0.99
ACTN1-205ENST00000538545 MAP3K1Q13233 1512 aa21.23■□□□□ 0.99
ACTN1-205ENST00000538545 KIAA0586Q9BVV6 1533 aa21.22■□□□□ 0.99
ACTN1-205ENST00000538545 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
ACTN1-205ENST00000538545 DISP1Q96F81 1524 aa21.19■□□□□ 0.98
ACTN1-205ENST00000538545 UGGT2Q9NYU1 1516 aa21.17■□□□□ 0.98
ACTN1-205ENST00000538545 CDK13Q14004 1512 aaKnown RBP21.16■□□□□ 0.98
ACTN1-205ENST00000538545 JPH4Q96JJ6 628 aa21.14■□□□□ 0.98
ACTN1-205ENST00000538545 MAGI3Q5TCQ9 1506 aa21.14■□□□□ 0.97
ACTN1-205ENST00000538545 KIAA0556O60303 1618 aa21.13■□□□□ 0.97
ACTN1-205ENST00000538545 NUP160Q12769 1436 aa21.08■□□□□ 0.97
ACTN1-205ENST00000538545 EPRSP07814 1512 aaKnown RBP21.07■□□□□ 0.96
ACTN1-205ENST00000538545 NCOA2Q15596 1464 aa21.06■□□□□ 0.96
ACTN1-205ENST00000538545 PLB1Q6P1J6 1458 aa21.05■□□□□ 0.96
ACTN1-205ENST00000538545 HECW1Q76N89 1606 aa21.04■□□□□ 0.96
ACTN1-205ENST00000538545 CHD1O14646 1710 aa21.03■□□□□ 0.96
ACTN1-205ENST00000538545 DHX57Q6P158 1386 aaKnown RBP21.02■□□□□ 0.96
ACTN1-205ENST00000538545 FGD6Q6ZV73 1430 aa21.01■□□□□ 0.95
ACTN1-205ENST00000538545 RAB3GAP2Q9H2M9 1393 aa21■□□□□ 0.95
ACTN1-205ENST00000538545 NUP153P49790 1475 aaKnown RBP21■□□□□ 0.95
ACTN1-205ENST00000538545 CCDC18Q5T9S5 1454 aa20.97■□□□□ 0.95
ACTN1-205ENST00000538545 EHBP1L1Q8N3D4 1523 aa20.97■□□□□ 0.95
ACTN1-205ENST00000538545 SUPT6HQ7KZ85 1726 aaKnown RBP20.97■□□□□ 0.95
ACTN1-205ENST00000538545 RAPGEF6Q8TEU7 1601 aa20.96■□□□□ 0.95
ACTN1-205ENST00000538545 PTPRKQ15262 1439 aa20.95■□□□□ 0.94
ACTN1-205ENST00000538545 MYOM3Q5VTT5 1437 aa20.95■□□□□ 0.94
ACTN1-205ENST00000538545 CARMIL2Q6F5E8 1435 aa20.94■□□□□ 0.94
ACTN1-205ENST00000538545 PRG4Q92954 1404 aaPredicted RBP20.94■□□□□ 0.94
ACTN1-205ENST00000538545 CHIC2Q9UKJ5 165 aa20.93■□□□□ 0.94
ACTN1-205ENST00000538545 SETD5Q9C0A6 1442 aa20.9■□□□□ 0.94
ACTN1-205ENST00000538545 ZNF644Q9H582 1327 aaPredicted RBP20.89■□□□□ 0.93
ACTN1-205ENST00000538545 ERCC6L2Q5T890 1561 aa20.88■□□□□ 0.93
ACTN1-205ENST00000538545 ARHGEF11O15085 1522 aa20.87■□□□□ 0.93
ACTN1-205ENST00000538545 PTPN23Q9H3S7 1636 aa20.86■□□□□ 0.93
ACTN1-205ENST00000538545 RRP7BPQ9NSQ0 103 aa20.85■□□□□ 0.93
ACTN1-205ENST00000538545 PTPRGP23470 1445 aa20.82■□□□□ 0.92
ACTN1-205ENST00000538545 CDK11AQ9UQ88 783 aaPredicted RBP20.81■□□□□ 0.92
ACTN1-205ENST00000538545 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
ACTN1-205ENST00000538545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.8■□□□□ 0.92
ACTN1-205ENST00000538545 SIN3AQ96ST3 1273 aa20.79■□□□□ 0.92
ACTN1-205ENST00000538545 KIF14Q15058 1648 aa20.79■□□□□ 0.92
ACTN1-205ENST00000538545 ATP10BO94823 1461 aa20.77■□□□□ 0.92
ACTN1-205ENST00000538545 ABCA8O94911 1581 aa20.77■□□□□ 0.92
ACTN1-205ENST00000538545 NEUROD1Q13562 356 aa20.77■□□□□ 0.91
ACTN1-205ENST00000538545 MAPKBP1O60336 1514 aa20.76■□□□□ 0.91
ACTN1-205ENST00000538545 TROQ12816 1431 aaPredicted RBP20.76■□□□□ 0.91
ACTN1-205ENST00000538545 PLEKHD1A6NEE1 506 aa20.74■□□□□ 0.91
ACTN1-205ENST00000538545 NAIPQ13075 1403 aa20.72■□□□□ 0.91
ACTN1-205ENST00000538545 CFDP1Q9UEE9 299 aaPredicted RBP20.71■□□□□ 0.91
ACTN1-205ENST00000538545 TCOF1Q13428 1488 aaKnown RBP20.7■□□□□ 0.9
ACTN1-205ENST00000538545 HFM1A2PYH4 1435 aa20.69■□□□□ 0.9
ACTN1-205ENST00000538545 SHROOM2Q13796 1616 aa20.69■□□□□ 0.9
ACTN1-205ENST00000538545 CLSPNQ9HAW4 1339 aa20.69■□□□□ 0.9
ACTN1-205ENST00000538545 MIA2Q96PC5 1412 aa20.68■□□□□ 0.9
ACTN1-205ENST00000538545 ZNF316A6NFI3 1004 aaPredicted RBP20.68■□□□□ 0.9
ACTN1-205ENST00000538545 KDM6BO15054 1643 aa20.67■□□□□ 0.9
ACTN1-205ENST00000538545 GPATCH8Q9UKJ3 1502 aaKnown RBP20.66■□□□□ 0.9
ACTN1-205ENST00000538545 DIEXFQ68CQ4 756 aaKnown RBP20.65■□□□□ 0.9
ACTN1-205ENST00000538545 UACAQ9BZF9 1416 aa20.65■□□□□ 0.9
ACTN1-205ENST00000538545 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.89
ACTN1-205ENST00000538545 KCNH8Q96L42 1107 aa20.64■□□□□ 0.89
ACTN1-205ENST00000538545 TRIM52Q96A61 297 aa20.63■□□□□ 0.89
ACTN1-205ENST00000538545 ABCC5O15440 1437 aa20.62■□□□□ 0.89
ACTN1-205ENST00000538545 DAPK1P53355 1430 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms