RNA–Protein interactions for RNA: ENST00000538243.1

KDM2B-207, Transcript of lysine demethylase 2B, humanhuman

TSL 2

Gene KDM2B, Length 4,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-207ENST00000538243 VPS8Q8N3P4 1428 aa22.26■■□□□ 1.15
KDM2B-207ENST00000538243 B4GALNT3Q6L9W6 998 aa22.25■■□□□ 1.15
KDM2B-207ENST00000538243 CCNB3Q8WWL7 1395 aa22.23■■□□□ 1.15
KDM2B-207ENST00000538243 RUSC2Q8N2Y8 1516 aa22.23■■□□□ 1.15
KDM2B-207ENST00000538243 EIF4G2P78344 907 aaKnown RBP eCLIP22.22■■□□□ 1.15
KDM2B-207ENST00000538243 TMC1Q8TDI8 760 aa22.21■■□□□ 1.15
KDM2B-207ENST00000538243 WIZO95785 1651 aa22.19■■□□□ 1.14
KDM2B-207ENST00000538243 MTUS2Q5JR59 1369 aa22.18■■□□□ 1.14
KDM2B-207ENST00000538243 BAZ1AQ9NRL2 1556 aaPredicted RBP22.18■■□□□ 1.14
KDM2B-207ENST00000538243 PPP4R2Q9NY27 417 aa22.1■■□□□ 1.13
KDM2B-207ENST00000538243 FBLN2P98095 1184 aa22.09■■□□□ 1.13
KDM2B-207ENST00000538243 RTN4Q9NQC3 1192 aaKnown RBP22.09■■□□□ 1.13
KDM2B-207ENST00000538243 DHX57Q6P158 1386 aaKnown RBP22.09■■□□□ 1.13
KDM2B-207ENST00000538243 KDM2AQ9Y2K7 1162 aa22.07■■□□□ 1.12
KDM2B-207ENST00000538243 RAB3GAP2Q9H2M9 1393 aa22.07■■□□□ 1.12
KDM2B-207ENST00000538243 NACADO15069 1562 aa22.07■■□□□ 1.12
KDM2B-207ENST00000538243 CANXP27824 592 aaKnown RBP22.03■■□□□ 1.12
KDM2B-207ENST00000538243 CCER2I3L3R5 266 aa22.03■■□□□ 1.12
KDM2B-207ENST00000538243 DEKP35659 375 aaKnown RBP22.02■■□□□ 1.12
KDM2B-207ENST00000538243 KIF27Q86VH2 1401 aa22.01■■□□□ 1.11
KDM2B-207ENST00000538243 NOP58Q9Y2X3 529 aaKnown RBP22■■□□□ 1.11
KDM2B-207ENST00000538243 ARXQ96QS3 562 aa22■■□□□ 1.11
KDM2B-207ENST00000538243 LAS1LQ9Y4W2 734 aaKnown RBP21.99■■□□□ 1.11
KDM2B-207ENST00000538243 RAPGEF2Q9Y4G8 1499 aa21.96■■□□□ 1.11
KDM2B-207ENST00000538243 SETD5Q9C0A6 1442 aa21.96■■□□□ 1.11
KDM2B-207ENST00000538243 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.1
KDM2B-207ENST00000538243 PPP1R15AO75807 674 aaPredicted RBP21.93■■□□□ 1.1
KDM2B-207ENST00000538243 HSPA5P11021 654 aaKnown RBP21.9■■□□□ 1.1
KDM2B-207ENST00000538243 FOXD1Q16676 465 aa21.87■■□□□ 1.09
KDM2B-207ENST00000538243 TIMELESSQ9UNS1 1208 aa21.86■■□□□ 1.09
KDM2B-207ENST00000538243 NEFMP07197 916 aa21.85■■□□□ 1.09
KDM2B-207ENST00000538243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.81■■□□□ 1.08
KDM2B-207ENST00000538243 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
KDM2B-207ENST00000538243 RGL3Q3MIN7 710 aa21.76■■□□□ 1.07
KDM2B-207ENST00000538243 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
KDM2B-207ENST00000538243 CUX2O14529 1486 aa21.73■■□□□ 1.07
KDM2B-207ENST00000538243 CARD11Q9BXL7 1154 aa21.71■■□□□ 1.07
KDM2B-207ENST00000538243 WDR43Q15061 677 aaKnown RBP eCLIP21.71■■□□□ 1.07
KDM2B-207ENST00000538243 RGS3P49796 1198 aa21.68■■□□□ 1.06
KDM2B-207ENST00000538243 FHAD1B1AJZ9 1412 aa21.67■■□□□ 1.06
KDM2B-207ENST00000538243 TSPY4P0CV99 314 aa21.66■■□□□ 1.06
KDM2B-207ENST00000538243 TSPY10P0CW01 314 aa21.66■■□□□ 1.06
KDM2B-207ENST00000538243 UPF2Q9HAU5 1272 aaKnown RBP21.66■■□□□ 1.06
KDM2B-207ENST00000538243 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.64■■□□□ 1.06
KDM2B-207ENST00000538243 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
KDM2B-207ENST00000538243 L3MBTL2Q969R5 705 aa21.62■■□□□ 1.05
KDM2B-207ENST00000538243 DDRGK1Q96HY6 314 aa21.62■■□□□ 1.05
KDM2B-207ENST00000538243 ARHGAP35Q9NRY4 1499 aa21.61■■□□□ 1.05
KDM2B-207ENST00000538243 ERICH6BQ5W0A0 696 aa21.6■■□□□ 1.05
KDM2B-207ENST00000538243 HSP90AA1P07900 732 aaKnown RBP21.59■■□□□ 1.05
KDM2B-207ENST00000538243 CC2D1BQ5T0F9 858 aaKnown RBP21.59■■□□□ 1.05
KDM2B-207ENST00000538243 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.58■■□□□ 1.05
KDM2B-207ENST00000538243 CFDP1Q9UEE9 299 aaPredicted RBP21.57■■□□□ 1.04
KDM2B-207ENST00000538243 IPO9Q96P70 1041 aaKnown RBP21.55■■□□□ 1.04
KDM2B-207ENST00000538243 MPHOSPH9Q99550 1183 aa21.55■■□□□ 1.04
KDM2B-207ENST00000538243 FANCIQ9NVI1 1328 aa21.55■■□□□ 1.04
KDM2B-207ENST00000538243 CHGAP10645 457 aaKnown RBP21.55■■□□□ 1.04
KDM2B-207ENST00000538243 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
KDM2B-207ENST00000538243 KIF21BO75037 1637 aa21.52■■□□□ 1.04
KDM2B-207ENST00000538243 PRKRIP1Q9H875 184 aaPredicted RBP21.52■■□□□ 1.04
KDM2B-207ENST00000538243 FHOD3Q2V2M9 1422 aa21.51■■□□□ 1.03
KDM2B-207ENST00000538243 NUDCQ9Y266 331 aa21.5■■□□□ 1.03
KDM2B-207ENST00000538243 DCAF11Q8TEB1 546 aa21.49■■□□□ 1.03
KDM2B-207ENST00000538243 SMARCA4P51532 1647 aa21.49■■□□□ 1.03
KDM2B-207ENST00000538243 NEUROD2Q15784 382 aa21.48■■□□□ 1.03
KDM2B-207ENST00000538243 RCAN3Q9UKA8 241 aa21.47■■□□□ 1.03
KDM2B-207ENST00000538243 SENP3Q9H4L4 574 aaPredicted RBP21.44■■□□□ 1.02
KDM2B-207ENST00000538243 PHLDB1Q86UU1 1377 aa21.42■■□□□ 1.02
KDM2B-207ENST00000538243 PKD2Q13563 968 aa21.41■■□□□ 1.02
KDM2B-207ENST00000538243 KNSTRNQ9Y448 316 aa21.41■■□□□ 1.02
KDM2B-207ENST00000538243 BECN1Q14457 450 aa21.41■■□□□ 1.02
KDM2B-207ENST00000538243 MSH5O43196 834 aa21.4■■□□□ 1.02
KDM2B-207ENST00000538243 FMN1Q68DA7 1419 aa21.4■■□□□ 1.02
KDM2B-207ENST00000538243 FRAT1Q92837 279 aaPredicted RBP21.39■■□□□ 1.02
KDM2B-207ENST00000538243 ANP32BQ92688 251 aaKnown RBP21.39■■□□□ 1.01
KDM2B-207ENST00000538243 SLC4A3P48751 1232 aa21.38■■□□□ 1.01
KDM2B-207ENST00000538243 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
KDM2B-207ENST00000538243 ZBED9Q6R2W3 1325 aa21.38■■□□□ 1.01
KDM2B-207ENST00000538243 TCERG1O14776 1098 aaKnown RBP21.37■■□□□ 1.01
KDM2B-207ENST00000538243 GLIPR1L2Q4G1C9 344 aa21.37■■□□□ 1.01
KDM2B-207ENST00000538243 PLEKHD1A6NEE1 506 aa21.35■■□□□ 1.01
KDM2B-207ENST00000538243 PAK3O75914 559 aaPredicted RBP21.35■■□□□ 1.01
KDM2B-207ENST00000538243 CCDC184Q52MB2 194 aa21.35■■□□□ 1.01
KDM2B-207ENST00000538243 EXOC6Q8TAG9 804 aa21.35■■□□□ 1.01
KDM2B-207ENST00000538243 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
KDM2B-207ENST00000538243 WASHC2AQ641Q2 1341 aa21.35■■□□□ 1.01
KDM2B-207ENST00000538243 PLIN1O60240 522 aa21.35■■□□□ 1.01
KDM2B-207ENST00000538243 SLC24A1O60721 1099 aa21.34■■□□□ 1.01
KDM2B-207ENST00000538243 SPRYD3Q8NCJ5 442 aa21.33■■□□□ 1.01
KDM2B-207ENST00000538243 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1
KDM2B-207ENST00000538243 TNNT2P45379 298 aaPredicted RBP21.33■■□□□ 1
KDM2B-207ENST00000538243 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
KDM2B-207ENST00000538243 PDE4AP27815 886 aa21.31■■□□□ 1
KDM2B-207ENST00000538243 CCDC18Q5T9S5 1454 aa21.31■■□□□ 1
KDM2B-207ENST00000538243 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
KDM2B-207ENST00000538243 SLKQ9H2G2 1235 aaPredicted RBP21.3■■□□□ 1
KDM2B-207ENST00000538243 RRBP1Q9P2E9 1410 aaKnown RBP21.29■■□□□ 1
KDM2B-207ENST00000538243 NAP1L5Q96NT1 182 aaPredicted RBP21.28■■□□□ 1
KDM2B-207ENST00000538243 SYNJ1O43426 1573 aa21.27■■□□□ 1
KDM2B-207ENST00000538243 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms