RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 EEA1Q15075 1411 aa19.18■□□□□ 0.66
SNHG1-206ENST00000537925 PRXQ9BXM0 1461 aa19.15■□□□□ 0.66
SNHG1-206ENST00000537925 KIAA0586Q9BVV6 1533 aa19.14■□□□□ 0.66
SNHG1-206ENST00000537925 ARAP1Q96P48 1450 aa19.12■□□□□ 0.65
SNHG1-206ENST00000537925 ERCC6L2Q5T890 1561 aa19.12■□□□□ 0.65
SNHG1-206ENST00000537925 CSRNP3Q8WYN3 585 aa19.11■□□□□ 0.65
SNHG1-206ENST00000537925 CTTNBP2Q8WZ74 1663 aa19.11■□□□□ 0.65
SNHG1-206ENST00000537925 IQGAP2Q13576 1575 aa19.08■□□□□ 0.65
SNHG1-206ENST00000537925 JPH4Q96JJ6 628 aa19.08■□□□□ 0.64
SNHG1-206ENST00000537925 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
SNHG1-206ENST00000537925 PRG4Q92954 1404 aaPredicted RBP19.05■□□□□ 0.64
SNHG1-206ENST00000537925 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
SNHG1-206ENST00000537925 FAM9AQ8IZU1 332 aaPredicted RBP19.03■□□□□ 0.64
SNHG1-206ENST00000537925 KIF21BO75037 1637 aa19.02■□□□□ 0.64
SNHG1-206ENST00000537925 UGGT2Q9NYU1 1516 aa18.97■□□□□ 0.63
SNHG1-206ENST00000537925 DISP1Q96F81 1524 aa18.93■□□□□ 0.62
SNHG1-206ENST00000537925 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
SNHG1-206ENST00000537925 KIAA0556O60303 1618 aa18.9■□□□□ 0.62
SNHG1-206ENST00000537925 GOLGA3Q08378 1498 aa18.86■□□□□ 0.61
SNHG1-206ENST00000537925 TNIKQ9UKE5 1360 aa18.85■□□□□ 0.61
SNHG1-206ENST00000537925 PTPRGP23470 1445 aa18.83■□□□□ 0.6
SNHG1-206ENST00000537925 SAMD9Q5K651 1589 aa18.82■□□□□ 0.6
SNHG1-206ENST00000537925 ADCY10Q96PN6 1610 aa18.81■□□□□ 0.6
SNHG1-206ENST00000537925 UBTFP17480 764 aaKnown RBP18.75■□□□□ 0.59
SNHG1-206ENST00000537925 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
SNHG1-206ENST00000537925 TTBK1Q5TCY1 1321 aaPredicted RBP18.73■□□□□ 0.59
SNHG1-206ENST00000537925 EFCAB5A4FU69 1503 aa18.73■□□□□ 0.59
SNHG1-206ENST00000537925 UHRF1BP1LA0JNW5 1464 aa18.72■□□□□ 0.59
SNHG1-206ENST00000537925 UACAQ9BZF9 1416 aa18.72■□□□□ 0.59
SNHG1-206ENST00000537925 ABCC2Q92887 1545 aa18.71■□□□□ 0.59
SNHG1-206ENST00000537925 ABCA8O94911 1581 aa18.69■□□□□ 0.58
SNHG1-206ENST00000537925 P3H3Q8IVL6 736 aa18.68■□□□□ 0.58
SNHG1-206ENST00000537925 MAPKBP1O60336 1514 aa18.67■□□□□ 0.58
SNHG1-206ENST00000537925 PLB1Q6P1J6 1458 aa18.67■□□□□ 0.58
SNHG1-206ENST00000537925 RANGAP1P46060 587 aaPredicted RBP18.66■□□□□ 0.58
SNHG1-206ENST00000537925 NPM1P06748 294 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNHG1-206ENST00000537925 KIF13AQ9H1H9 1805 aa18.64■□□□□ 0.57
SNHG1-206ENST00000537925 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
SNHG1-206ENST00000537925 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.57
SNHG1-206ENST00000537925 ZCCHC11Q5TAX3 1644 aaKnown RBP18.64■□□□□ 0.57
SNHG1-206ENST00000537925 ARHGAP35Q9NRY4 1499 aa18.63■□□□□ 0.57
SNHG1-206ENST00000537925 RAPGEF6Q8TEU7 1601 aa18.62■□□□□ 0.57
SNHG1-206ENST00000537925 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
SNHG1-206ENST00000537925 DIP2BQ9P265 1576 aa18.56■□□□□ 0.56
SNHG1-206ENST00000537925 ABCC10Q5T3U5 1492 aa18.55■□□□□ 0.56
SNHG1-206ENST00000537925 ASXL2Q76L83 1435 aa18.53■□□□□ 0.56
SNHG1-206ENST00000537925 FMN1Q68DA7 1419 aa18.52■□□□□ 0.55
SNHG1-206ENST00000537925 NUP153P49790 1475 aaKnown RBP18.51■□□□□ 0.55
SNHG1-206ENST00000537925 CLIP1P30622 1438 aa18.51■□□□□ 0.55
SNHG1-206ENST00000537925 ATP10BO94823 1461 aa18.5■□□□□ 0.55
SNHG1-206ENST00000537925 LOC105371045A0A1W2PR82 267 aa18.49■□□□□ 0.55
SNHG1-206ENST00000537925 GLI2P10070 1586 aa18.47■□□□□ 0.55
SNHG1-206ENST00000537925 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.55
SNHG1-206ENST00000537925 HECW1Q76N89 1606 aa18.46■□□□□ 0.55
SNHG1-206ENST00000537925 LRRIQ1Q96JM4 1722 aa18.46■□□□□ 0.55
SNHG1-206ENST00000537925 CEP162Q5TB80 1403 aa18.45■□□□□ 0.54
SNHG1-206ENST00000537925 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
SNHG1-206ENST00000537925 TSPOAP1O95153 1857 aa18.45■□□□□ 0.54
SNHG1-206ENST00000537925 EPRSP07814 1512 aaKnown RBP18.44■□□□□ 0.54
SNHG1-206ENST00000537925 ARID3CA6NKF2 412 aa18.42■□□□□ 0.54
SNHG1-206ENST00000537925 PCF11O94913 1555 aaKnown RBP18.42■□□□□ 0.54
SNHG1-206ENST00000537925 MAP3K4Q9Y6R4 1608 aa18.41■□□□□ 0.54
SNHG1-206ENST00000537925 PPRC1Q5VV67 1664 aaKnown RBP18.39■□□□□ 0.53
SNHG1-206ENST00000537925 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.53
SNHG1-206ENST00000537925 CASKIN1Q8WXD9 1431 aa18.38■□□□□ 0.53
SNHG1-206ENST00000537925 CFAP43Q8NDM7 1665 aa18.38■□□□□ 0.53
SNHG1-206ENST00000537925 FYCO1Q9BQS8 1478 aa18.36■□□□□ 0.53
SNHG1-206ENST00000537925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
SNHG1-206ENST00000537925 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
SNHG1-206ENST00000537925 ABCA9Q8IUA7 1624 aa18.34■□□□□ 0.53
SNHG1-206ENST00000537925 KCNH8Q96L42 1107 aa18.33■□□□□ 0.52
SNHG1-206ENST00000537925 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
SNHG1-206ENST00000537925 CCDC18Q5T9S5 1454 aa18.31■□□□□ 0.52
SNHG1-206ENST00000537925 PLEKHD1A6NEE1 506 aa18.31■□□□□ 0.52
SNHG1-206ENST00000537925 MAGI3Q5TCQ9 1506 aa18.27■□□□□ 0.52
SNHG1-206ENST00000537925 CD109Q6YHK3 1445 aa18.27■□□□□ 0.51
SNHG1-206ENST00000537925 TEX14Q8IWB6 1497 aa18.25■□□□□ 0.51
SNHG1-206ENST00000537925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNHG1-206ENST00000537925 CDK11AQ9UQ88 783 aaPredicted RBP18.25■□□□□ 0.51
SNHG1-206ENST00000537925 VPS8Q8N3P4 1428 aa18.24■□□□□ 0.51
SNHG1-206ENST00000537925 TTC37Q6PGP7 1564 aa18.24■□□□□ 0.51
SNHG1-206ENST00000537925 KDM6BO15054 1643 aa18.23■□□□□ 0.51
SNHG1-206ENST00000537925 KIF14Q15058 1648 aa18.23■□□□□ 0.51
SNHG1-206ENST00000537925 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
SNHG1-206ENST00000537925 MYO5CQ9NQX4 1742 aa18.2■□□□□ 0.5
SNHG1-206ENST00000537925 TIAM1Q13009 1591 aa18.14■□□□□ 0.5
SNHG1-206ENST00000537925 CFAP74Q9C0B2 1584 aa18.14■□□□□ 0.5
SNHG1-206ENST00000537925 KDM4FA0A1W2PPD8 638 aa18.14■□□□□ 0.49
SNHG1-206ENST00000537925 NEO1Q92859 1461 aa18.13■□□□□ 0.49
SNHG1-206ENST00000537925 COL17A1Q9UMD9 1497 aaPredicted RBP18.13■□□□□ 0.49
SNHG1-206ENST00000537925 CDC42BPAQ5VT25 1732 aa18.13■□□□□ 0.49
SNHG1-206ENST00000537925 CDC42BPBQ9Y5S2 1711 aa18.13■□□□□ 0.49
SNHG1-206ENST00000537925 ARAP3Q8WWN8 1544 aa18.13■□□□□ 0.49
SNHG1-206ENST00000537925 PLCH2O75038 1416 aa18.11■□□□□ 0.49
SNHG1-206ENST00000537925 EHBP1L1Q8N3D4 1523 aa18.11■□□□□ 0.49
SNHG1-206ENST00000537925 PHLDB1Q86UU1 1377 aa18.11■□□□□ 0.49
SNHG1-206ENST00000537925 MAP3K1Q13233 1512 aa18.1■□□□□ 0.49
SNHG1-206ENST00000537925 PREX2Q70Z35 1606 aa18.1■□□□□ 0.49
SNHG1-206ENST00000537925 FANCAO15360 1455 aa18.1■□□□□ 0.49
SNHG1-206ENST00000537925 MTUS2Q5JR59 1369 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms