RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 MAP3K1Q13233 1512 aa14.06□□□□□ -0.16
PTPRR-205ENST00000537619 FHOD3Q2V2M9 1422 aa14.06□□□□□ -0.16
PTPRR-205ENST00000537619 CTTNBP2Q8WZ74 1663 aa14.06□□□□□ -0.16
PTPRR-205ENST00000537619 P3H3Q8IVL6 736 aa14.04□□□□□ -0.16
PTPRR-205ENST00000537619 EFCAB5A4FU69 1503 aa14.03□□□□□ -0.16
PTPRR-205ENST00000537619 CFAP43Q8NDM7 1665 aa14.02□□□□□ -0.17
PTPRR-205ENST00000537619 FHAD1B1AJZ9 1412 aa14.02□□□□□ -0.17
PTPRR-205ENST00000537619 LRRC9Q6ZRR7 1453 aa14.01□□□□□ -0.17
PTPRR-205ENST00000537619 CCNB3Q8WWL7 1395 aa14□□□□□ -0.17
PTPRR-205ENST00000537619 MRC2Q9UBG0 1479 aa14□□□□□ -0.17
PTPRR-205ENST00000537619 FYCO1Q9BQS8 1478 aa13.97□□□□□ -0.17
PTPRR-205ENST00000537619 SAMD9Q5K651 1589 aa13.97□□□□□ -0.17
PTPRR-205ENST00000537619 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
PTPRR-205ENST00000537619 AQRO60306 1485 aaKnown RBP eCLIP13.96□□□□□ -0.17
PTPRR-205ENST00000537619 CASKIN1Q8WXD9 1431 aa13.96□□□□□ -0.17
PTPRR-205ENST00000537619 PBRM1Q86U86 1689 aa13.96□□□□□ -0.17
PTPRR-205ENST00000537619 DHX57Q6P158 1386 aaKnown RBP13.95□□□□□ -0.18
PTPRR-205ENST00000537619 SNAPC4Q5SXM2 1469 aa13.95□□□□□ -0.18
PTPRR-205ENST00000537619 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
PTPRR-205ENST00000537619 WDR62O43379 1518 aa13.92□□□□□ -0.18
PTPRR-205ENST00000537619 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.18
PTPRR-205ENST00000537619 FMN1Q68DA7 1419 aa13.9□□□□□ -0.18
PTPRR-205ENST00000537619 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.18
PTPRR-205ENST00000537619 LRRIQ1Q96JM4 1722 aa13.89□□□□□ -0.19
PTPRR-205ENST00000537619 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
PTPRR-205ENST00000537619 GRIN2BQ13224 1484 aa13.88□□□□□ -0.19
PTPRR-205ENST00000537619 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
PTPRR-205ENST00000537619 ITGAEP38570 1179 aa13.87□□□□□ -0.19
PTPRR-205ENST00000537619 ZNF316A6NFI3 1004 aaPredicted RBP13.85□□□□□ -0.19
PTPRR-205ENST00000537619 CLSPNQ9HAW4 1339 aa13.85□□□□□ -0.19
PTPRR-205ENST00000537619 DIEXFQ68CQ4 756 aaKnown RBP13.84□□□□□ -0.19
PTPRR-205ENST00000537619 IQGAP2Q13576 1575 aa13.83□□□□□ -0.19
PTPRR-205ENST00000537619 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.2
PTPRR-205ENST00000537619 THOC2Q8NI27 1593 aaKnown RBP13.82□□□□□ -0.2
PTPRR-205ENST00000537619 EIF4G3O43432 1585 aaKnown RBP13.8□□□□□ -0.2
PTPRR-205ENST00000537619 FAM50AQ14320 339 aaKnown RBP13.8□□□□□ -0.2
PTPRR-205ENST00000537619 MAPKBP1O60336 1514 aa13.79□□□□□ -0.2
PTPRR-205ENST00000537619 MAGI3Q5TCQ9 1506 aa13.79□□□□□ -0.2
PTPRR-205ENST00000537619 FGD6Q6ZV73 1430 aa13.78□□□□□ -0.2
PTPRR-205ENST00000537619 SETD5Q9C0A6 1442 aa13.78□□□□□ -0.2
PTPRR-205ENST00000537619 ERCC6Q03468 1493 aa13.78□□□□□ -0.2
PTPRR-205ENST00000537619 UGGT2Q9NYU1 1516 aa13.77□□□□□ -0.2
PTPRR-205ENST00000537619 MTUS2Q5JR59 1369 aa13.77□□□□□ -0.21
PTPRR-205ENST00000537619 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTPRR-205ENST00000537619 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
PTPRR-205ENST00000537619 EHBP1L1Q8N3D4 1523 aa13.76□□□□□ -0.21
PTPRR-205ENST00000537619 ARHGEF11O15085 1522 aa13.74□□□□□ -0.21
PTPRR-205ENST00000537619 GRIN2AQ12879 1464 aa13.74□□□□□ -0.21
PTPRR-205ENST00000537619 HECW1Q76N89 1606 aa13.74□□□□□ -0.21
PTPRR-205ENST00000537619 PTPRKQ15262 1439 aa13.73□□□□□ -0.21
PTPRR-205ENST00000537619 DISP1Q96F81 1524 aa13.73□□□□□ -0.21
PTPRR-205ENST00000537619 SUPT6HQ7KZ85 1726 aaKnown RBP13.72□□□□□ -0.21
PTPRR-205ENST00000537619 KIAA0586Q9BVV6 1533 aa13.72□□□□□ -0.21
PTPRR-205ENST00000537619 MYOM3Q5VTT5 1437 aa13.72□□□□□ -0.21
PTPRR-205ENST00000537619 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
PTPRR-205ENST00000537619 CDK13Q14004 1512 aaKnown RBP13.72□□□□□ -0.21
PTPRR-205ENST00000537619 EPRSP07814 1512 aaKnown RBP13.71□□□□□ -0.21
PTPRR-205ENST00000537619 KIAA0556O60303 1618 aa13.71□□□□□ -0.21
PTPRR-205ENST00000537619 MAGI1Q96QZ7 1491 aaPredicted RBP13.68□□□□□ -0.22
PTPRR-205ENST00000537619 CEP170Q5SW79 1584 aa13.68□□□□□ -0.22
PTPRR-205ENST00000537619 PTPN23Q9H3S7 1636 aa13.67□□□□□ -0.22
PTPRR-205ENST00000537619 SYNJ2O15056 1496 aa13.65□□□□□ -0.22
PTPRR-205ENST00000537619 TCOF1Q13428 1488 aaKnown RBP13.64□□□□□ -0.23
PTPRR-205ENST00000537619 HFM1A2PYH4 1435 aa13.64□□□□□ -0.23
PTPRR-205ENST00000537619 ARID3CA6NKF2 412 aa13.64□□□□□ -0.23
PTPRR-205ENST00000537619 NUP153P49790 1475 aaKnown RBP13.63□□□□□ -0.23
PTPRR-205ENST00000537619 MIER1Q8N108 512 aa13.62□□□□□ -0.23
PTPRR-205ENST00000537619 SCAF1Q9H7N4 1312 aaKnown RBP13.62□□□□□ -0.23
PTPRR-205ENST00000537619 NUP160Q12769 1436 aa13.62□□□□□ -0.23
PTPRR-205ENST00000537619 NAIPQ13075 1403 aa13.62□□□□□ -0.23
PTPRR-205ENST00000537619 SIN3AQ96ST3 1273 aa13.62□□□□□ -0.23
PTPRR-205ENST00000537619 RAPGEF6Q8TEU7 1601 aa13.61□□□□□ -0.23
PTPRR-205ENST00000537619 NEUROD1Q13562 356 aa13.6□□□□□ -0.23
PTPRR-205ENST00000537619 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
PTPRR-205ENST00000537619 ACIN1Q9UKV3 1341 aaKnown RBP13.58□□□□□ -0.24
PTPRR-205ENST00000537619 MIA2Q96PC5 1412 aa13.57□□□□□ -0.24
PTPRR-205ENST00000537619 UACAQ9BZF9 1416 aa13.56□□□□□ -0.24
PTPRR-205ENST00000537619 PLB1Q6P1J6 1458 aa13.56□□□□□ -0.24
PTPRR-205ENST00000537619 FBLN2P98095 1184 aa13.55□□□□□ -0.24
PTPRR-205ENST00000537619 KDM6BO15054 1643 aa13.54□□□□□ -0.24
PTPRR-205ENST00000537619 GCC2Q8IWJ2 1684 aa13.54□□□□□ -0.24
PTPRR-205ENST00000537619 AKNAQ7Z591 1439 aa13.52□□□□□ -0.24
PTPRR-205ENST00000537619 JPH4Q96JJ6 628 aa13.52□□□□□ -0.25
PTPRR-205ENST00000537619 RRP7BPQ9NSQ0 103 aa13.52□□□□□ -0.25
PTPRR-205ENST00000537619 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.25
PTPRR-205ENST00000537619 PRG4Q92954 1404 aaPredicted RBP13.52□□□□□ -0.25
PTPRR-205ENST00000537619 DENND4BO75064 1496 aaPredicted RBP13.52□□□□□ -0.25
PTPRR-205ENST00000537619 TROQ12816 1431 aaPredicted RBP13.5□□□□□ -0.25
PTPRR-205ENST00000537619 ZNF644Q9H582 1327 aaPredicted RBP13.49□□□□□ -0.25
PTPRR-205ENST00000537619 KIF14Q15058 1648 aa13.49□□□□□ -0.25
PTPRR-205ENST00000537619 ABCA8O94911 1581 aa13.48□□□□□ -0.25
PTPRR-205ENST00000537619 DAPK1P53355 1430 aa13.48□□□□□ -0.25
PTPRR-205ENST00000537619 CARMIL2Q6F5E8 1435 aa13.48□□□□□ -0.25
PTPRR-205ENST00000537619 ABCC5O15440 1437 aa13.48□□□□□ -0.25
PTPRR-205ENST00000537619 DNMT1P26358 1616 aaKnown RBP13.48□□□□□ -0.25
PTPRR-205ENST00000537619 KDM5BQ9UGL1 1544 aa13.47□□□□□ -0.25
PTPRR-205ENST00000537619 CENPBP07199 599 aaPredicted RBP13.47□□□□□ -0.25
PTPRR-205ENST00000537619 PPP1R15AO75807 674 aaPredicted RBP13.47□□□□□ -0.25
PTPRR-205ENST00000537619 YTHDC1Q96MU7 727 aaKnown RBP13.47□□□□□ -0.25
PTPRR-205ENST00000537619 TIMELESSQ9UNS1 1208 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms