RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 EEA1Q15075 1411 aa25.53■■□□□ 1.68
SRRM4-202ENST00000537597 KIAA0586Q9BVV6 1533 aa25.52■■□□□ 1.68
SRRM4-202ENST00000537597 CSRNP3Q8WYN3 585 aa25.51■■□□□ 1.67
SRRM4-202ENST00000537597 JPH4Q96JJ6 628 aa25.47■■□□□ 1.67
SRRM4-202ENST00000537597 ARAP1Q96P48 1450 aa25.45■■□□□ 1.66
SRRM4-202ENST00000537597 ERCC6L2Q5T890 1561 aa25.42■■□□□ 1.66
SRRM4-202ENST00000537597 PRG4Q92954 1404 aaPredicted RBP25.36■■□□□ 1.65
SRRM4-202ENST00000537597 CYB5RLQ6IPT4 315 aa25.33■■□□□ 1.65
SRRM4-202ENST00000537597 IQGAP2Q13576 1575 aa25.29■■□□□ 1.64
SRRM4-202ENST00000537597 UGGT2Q9NYU1 1516 aa25.27■■□□□ 1.64
SRRM4-202ENST00000537597 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
SRRM4-202ENST00000537597 KIF21BO75037 1637 aa25.25■■□□□ 1.63
SRRM4-202ENST00000537597 DISP1Q96F81 1524 aa25.23■■□□□ 1.63
SRRM4-202ENST00000537597 CTTNBP2Q8WZ74 1663 aa25.19■■□□□ 1.62
SRRM4-202ENST00000537597 CARMIL2Q6F5E8 1435 aa25.12■■□□□ 1.61
SRRM4-202ENST00000537597 TNIKQ9UKE5 1360 aa25.11■■□□□ 1.61
SRRM4-202ENST00000537597 PTPRGP23470 1445 aa25.07■■□□□ 1.6
SRRM4-202ENST00000537597 KIAA0556O60303 1618 aa25.07■■□□□ 1.6
SRRM4-202ENST00000537597 GOLGA3Q08378 1498 aa25.05■■□□□ 1.6
SRRM4-202ENST00000537597 SAMD9Q5K651 1589 aa25.01■■□□□ 1.59
SRRM4-202ENST00000537597 UHRF1BP1LA0JNW5 1464 aa24.97■■□□□ 1.59
SRRM4-202ENST00000537597 ADCY10Q96PN6 1610 aa24.97■■□□□ 1.59
SRRM4-202ENST00000537597 UACAQ9BZF9 1416 aa24.93■■□□□ 1.58
SRRM4-202ENST00000537597 UBTFP17480 764 aaKnown RBP24.9■■□□□ 1.58
SRRM4-202ENST00000537597 ABCA8O94911 1581 aa24.87■■□□□ 1.57
SRRM4-202ENST00000537597 ABCC2Q92887 1545 aa24.86■■□□□ 1.57
SRRM4-202ENST00000537597 EFCAB5A4FU69 1503 aa24.85■■□□□ 1.57
SRRM4-202ENST00000537597 PLB1Q6P1J6 1458 aa24.84■■□□□ 1.57
SRRM4-202ENST00000537597 KDM5BQ9UGL1 1544 aa24.84■■□□□ 1.57
SRRM4-202ENST00000537597 P3H3Q8IVL6 736 aa24.83■■□□□ 1.57
SRRM4-202ENST00000537597 MAPKBP1O60336 1514 aa24.82■■□□□ 1.56
SRRM4-202ENST00000537597 EHMT2Q96KQ7 1210 aa24.82■■□□□ 1.56
SRRM4-202ENST00000537597 ARHGAP35Q9NRY4 1499 aa24.82■■□□□ 1.56
SRRM4-202ENST00000537597 TTBK1Q5TCY1 1321 aaPredicted RBP24.79■■□□□ 1.56
SRRM4-202ENST00000537597 FHOD3Q2V2M9 1422 aa24.78■■□□□ 1.56
SRRM4-202ENST00000537597 NPM1P06748 294 aaKnown RBP eCLIP24.75■■□□□ 1.55
SRRM4-202ENST00000537597 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
SRRM4-202ENST00000537597 ABCC10Q5T3U5 1492 aa24.7■■□□□ 1.55
SRRM4-202ENST00000537597 LOC105371045A0A1W2PR82 267 aa24.68■■□□□ 1.54
SRRM4-202ENST00000537597 ATP10BO94823 1461 aa24.68■■□□□ 1.54
SRRM4-202ENST00000537597 ZCCHC11Q5TAX3 1644 aaKnown RBP24.68■■□□□ 1.54
SRRM4-202ENST00000537597 ASXL2Q76L83 1435 aa24.66■■□□□ 1.54
SRRM4-202ENST00000537597 NUP153P49790 1475 aaKnown RBP24.65■■□□□ 1.54
SRRM4-202ENST00000537597 RAPGEF6Q8TEU7 1601 aa24.65■■□□□ 1.54
SRRM4-202ENST00000537597 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.54
SRRM4-202ENST00000537597 KIF13AQ9H1H9 1805 aa24.63■■□□□ 1.53
SRRM4-202ENST00000537597 DIP2BQ9P265 1576 aa24.62■■□□□ 1.53
SRRM4-202ENST00000537597 FMN1Q68DA7 1419 aa24.61■■□□□ 1.53
SRRM4-202ENST00000537597 CLIP1P30622 1438 aa24.61■■□□□ 1.53
SRRM4-202ENST00000537597 GLI2P10070 1586 aa24.58■■□□□ 1.52
SRRM4-202ENST00000537597 EPRSP07814 1512 aaKnown RBP24.56■■□□□ 1.52
SRRM4-202ENST00000537597 FAM69CQ0P6D2 419 aa24.55■■□□□ 1.52
SRRM4-202ENST00000537597 WDR7Q9Y4E6 1490 aa24.54■■□□□ 1.52
SRRM4-202ENST00000537597 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
SRRM4-202ENST00000537597 CASKIN1Q8WXD9 1431 aa24.5■■□□□ 1.51
SRRM4-202ENST00000537597 ARID3CA6NKF2 412 aa24.45■■□□□ 1.5
SRRM4-202ENST00000537597 HECW1Q76N89 1606 aa24.42■■□□□ 1.5
SRRM4-202ENST00000537597 MAP3K4Q9Y6R4 1608 aa24.42■■□□□ 1.5
SRRM4-202ENST00000537597 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
SRRM4-202ENST00000537597 CDK13Q14004 1512 aaKnown RBP24.41■■□□□ 1.5
SRRM4-202ENST00000537597 PPRC1Q5VV67 1664 aaKnown RBP24.4■■□□□ 1.5
SRRM4-202ENST00000537597 PCF11O94913 1555 aaKnown RBP24.39■■□□□ 1.5
SRRM4-202ENST00000537597 FYCO1Q9BQS8 1478 aa24.38■■□□□ 1.49
SRRM4-202ENST00000537597 PLEKHD1A6NEE1 506 aa24.37■■□□□ 1.49
SRRM4-202ENST00000537597 KCNH8Q96L42 1107 aa24.36■■□□□ 1.49
SRRM4-202ENST00000537597 ABCA9Q8IUA7 1624 aa24.34■■□□□ 1.49
SRRM4-202ENST00000537597 MAGI3Q5TCQ9 1506 aa24.34■■□□□ 1.49
SRRM4-202ENST00000537597 CFAP43Q8NDM7 1665 aa24.31■■□□□ 1.48
SRRM4-202ENST00000537597 CD109Q6YHK3 1445 aa24.31■■□□□ 1.48
SRRM4-202ENST00000537597 CCDC18Q5T9S5 1454 aa24.31■■□□□ 1.48
SRRM4-202ENST00000537597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.3■■□□□ 1.48
SRRM4-202ENST00000537597 HNRNPUL2Q1KMD3 747 aaKnown RBP24.3■■□□□ 1.48
SRRM4-202ENST00000537597 ATP1B4Q9UN42 357 aaPredicted RBP24.27■■□□□ 1.48
SRRM4-202ENST00000537597 TROQ12816 1431 aaPredicted RBP24.27■■□□□ 1.48
SRRM4-202ENST00000537597 VPS8Q8N3P4 1428 aa24.26■■□□□ 1.47
SRRM4-202ENST00000537597 TSPOAP1O95153 1857 aa24.26■■□□□ 1.47
SRRM4-202ENST00000537597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.25■■□□□ 1.47
SRRM4-202ENST00000537597 CDK11AQ9UQ88 783 aaPredicted RBP24.25■■□□□ 1.47
SRRM4-202ENST00000537597 COL17A1Q9UMD9 1497 aaPredicted RBP24.23■■□□□ 1.47
SRRM4-202ENST00000537597 TEX14Q8IWB6 1497 aa24.21■■□□□ 1.47
SRRM4-202ENST00000537597 TTC37Q6PGP7 1564 aa24.17■■□□□ 1.46
SRRM4-202ENST00000537597 KIF14Q15058 1648 aa24.16■■□□□ 1.46
SRRM4-202ENST00000537597 PLCH2O75038 1416 aa24.16■■□□□ 1.46
SRRM4-202ENST00000537597 PHLDB1Q86UU1 1377 aa24.16■■□□□ 1.46
SRRM4-202ENST00000537597 MAP3K1Q13233 1512 aa24.14■■□□□ 1.45
SRRM4-202ENST00000537597 ARAP3Q8WWN8 1544 aa24.14■■□□□ 1.45
SRRM4-202ENST00000537597 NEO1Q92859 1461 aa24.13■■□□□ 1.45
SRRM4-202ENST00000537597 KDM6BO15054 1643 aa24.1■■□□□ 1.45
SRRM4-202ENST00000537597 TIAM1Q13009 1591 aa24.08■■□□□ 1.44
SRRM4-202ENST00000537597 FANCAO15360 1455 aa24.04■■□□□ 1.44
SRRM4-202ENST00000537597 AKNAQ7Z591 1439 aa24.03■■□□□ 1.44
SRRM4-202ENST00000537597 LRRC9Q6ZRR7 1453 aa24.01■■□□□ 1.43
SRRM4-202ENST00000537597 EHBP1L1Q8N3D4 1523 aa24.01■■□□□ 1.43
SRRM4-202ENST00000537597 GPATCH8Q9UKJ3 1502 aaKnown RBP24.01■■□□□ 1.43
SRRM4-202ENST00000537597 KANK4Q5T7N3 995 aaPredicted RBP24.01■■□□□ 1.43
SRRM4-202ENST00000537597 MTUS2Q5JR59 1369 aa24.01■■□□□ 1.43
SRRM4-202ENST00000537597 MYO5CQ9NQX4 1742 aa23.99■■□□□ 1.43
SRRM4-202ENST00000537597 CDC42BPBQ9Y5S2 1711 aa23.99■■□□□ 1.43
SRRM4-202ENST00000537597 EFCAB2Q5VUJ9 269 aa23.99■■□□□ 1.43
SRRM4-202ENST00000537597 CDC42BPAQ5VT25 1732 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms