RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 SHROOM2Q13796 1616 aa17.14■□□□□ 0.33
CCDC170-202ENST00000537358 ERCC6L2Q5T890 1561 aa17.11■□□□□ 0.33
CCDC170-202ENST00000537358 KIF27Q86VH2 1401 aa17.08■□□□□ 0.32
CCDC170-202ENST00000537358 CUL7Q14999 1698 aa17.06■□□□□ 0.32
CCDC170-202ENST00000537358 PRG4Q92954 1404 aaPredicted RBP17.05■□□□□ 0.32
CCDC170-202ENST00000537358 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
CCDC170-202ENST00000537358 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
CCDC170-202ENST00000537358 IGF1RP08069 1367 aa17■□□□□ 0.31
CCDC170-202ENST00000537358 KIAA0586Q9BVV6 1533 aa16.97■□□□□ 0.31
CCDC170-202ENST00000537358 NPM1P06748 294 aaKnown RBP eCLIP16.95■□□□□ 0.3
CCDC170-202ENST00000537358 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
CCDC170-202ENST00000537358 KIF13AQ9H1H9 1805 aa16.87■□□□□ 0.29
CCDC170-202ENST00000537358 CARMIL2Q6F5E8 1435 aa16.86■□□□□ 0.29
CCDC170-202ENST00000537358 IQGAP2Q13576 1575 aa16.85■□□□□ 0.29
CCDC170-202ENST00000537358 ADCY10Q96PN6 1610 aa16.84■□□□□ 0.29
CCDC170-202ENST00000537358 MAPKBP1O60336 1514 aa16.83■□□□□ 0.28
CCDC170-202ENST00000537358 PTPRGP23470 1445 aa16.81■□□□□ 0.28
CCDC170-202ENST00000537358 ABCC10Q5T3U5 1492 aa16.8■□□□□ 0.28
CCDC170-202ENST00000537358 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
CCDC170-202ENST00000537358 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
CCDC170-202ENST00000537358 TNIKQ9UKE5 1360 aa16.79■□□□□ 0.28
CCDC170-202ENST00000537358 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
CCDC170-202ENST00000537358 DIP2BQ9P265 1576 aa16.76■□□□□ 0.27
CCDC170-202ENST00000537358 ABCC2Q92887 1545 aa16.71■□□□□ 0.27
CCDC170-202ENST00000537358 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
CCDC170-202ENST00000537358 CTTNBP2Q8WZ74 1663 aa16.7■□□□□ 0.26
CCDC170-202ENST00000537358 TSPOAP1O95153 1857 aa16.69■□□□□ 0.26
CCDC170-202ENST00000537358 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
CCDC170-202ENST00000537358 UHRF1BP1LA0JNW5 1464 aa16.68■□□□□ 0.26
CCDC170-202ENST00000537358 UACAQ9BZF9 1416 aa16.68■□□□□ 0.26
CCDC170-202ENST00000537358 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
CCDC170-202ENST00000537358 KIAA0556O60303 1618 aa16.67■□□□□ 0.26
CCDC170-202ENST00000537358 ASXL2Q76L83 1435 aa16.64■□□□□ 0.25
CCDC170-202ENST00000537358 KDM6BO15054 1643 aa16.64■□□□□ 0.25
CCDC170-202ENST00000537358 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
CCDC170-202ENST00000537358 PPP6R1Q9UPN7 881 aa16.62■□□□□ 0.25
CCDC170-202ENST00000537358 ADRA2BP18089 450 aa16.61■□□□□ 0.25
CCDC170-202ENST00000537358 FAM9AQ8IZU1 332 aaPredicted RBP16.61■□□□□ 0.25
CCDC170-202ENST00000537358 KDM5BQ9UGL1 1544 aa16.6■□□□□ 0.25
CCDC170-202ENST00000537358 GLI2P10070 1586 aa16.6■□□□□ 0.25
CCDC170-202ENST00000537358 PRXQ9BXM0 1461 aa16.59■□□□□ 0.25
CCDC170-202ENST00000537358 ZCCHC11Q5TAX3 1644 aaKnown RBP16.59■□□□□ 0.25
CCDC170-202ENST00000537358 EPRSP07814 1512 aaKnown RBP16.53■□□□□ 0.24
CCDC170-202ENST00000537358 TEX14Q8IWB6 1497 aa16.52■□□□□ 0.23
CCDC170-202ENST00000537358 PPRC1Q5VV67 1664 aaKnown RBP16.51■□□□□ 0.23
CCDC170-202ENST00000537358 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
CCDC170-202ENST00000537358 MAP3K4Q9Y6R4 1608 aa16.51■□□□□ 0.23
CCDC170-202ENST00000537358 WDR7Q9Y4E6 1490 aa16.5■□□□□ 0.23
CCDC170-202ENST00000537358 EEA1Q15075 1411 aa16.5■□□□□ 0.23
CCDC170-202ENST00000537358 ABCA8O94911 1581 aa16.49■□□□□ 0.23
CCDC170-202ENST00000537358 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
CCDC170-202ENST00000537358 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
CCDC170-202ENST00000537358 KCNH8Q96L42 1107 aa16.42■□□□□ 0.22
CCDC170-202ENST00000537358 SAMD9Q5K651 1589 aa16.4■□□□□ 0.22
CCDC170-202ENST00000537358 CD109Q6YHK3 1445 aa16.4■□□□□ 0.22
CCDC170-202ENST00000537358 MAGI3Q5TCQ9 1506 aa16.37■□□□□ 0.21
CCDC170-202ENST00000537358 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
CCDC170-202ENST00000537358 KDM4FA0A1W2PPD8 638 aa16.36■□□□□ 0.21
CCDC170-202ENST00000537358 ARID3CA6NKF2 412 aa16.36■□□□□ 0.21
CCDC170-202ENST00000537358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
CCDC170-202ENST00000537358 RANGAP1P46060 587 aaPredicted RBP16.35■□□□□ 0.21
CCDC170-202ENST00000537358 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
CCDC170-202ENST00000537358 ATP10BO94823 1461 aa16.35■□□□□ 0.21
CCDC170-202ENST00000537358 COL17A1Q9UMD9 1497 aaPredicted RBP16.35■□□□□ 0.21
CCDC170-202ENST00000537358 KIF21BO75037 1637 aa16.34■□□□□ 0.21
CCDC170-202ENST00000537358 PIAS4Q8N2W9 510 aaPredicted RBP16.33■□□□□ 0.2
CCDC170-202ENST00000537358 ADGRL1O94910 1474 aa16.3■□□□□ 0.2
CCDC170-202ENST00000537358 EFCAB5A4FU69 1503 aa16.29■□□□□ 0.2
CCDC170-202ENST00000537358 FHOD3Q2V2M9 1422 aa16.29■□□□□ 0.2
CCDC170-202ENST00000537358 ABCA9Q8IUA7 1624 aa16.28■□□□□ 0.2
CCDC170-202ENST00000537358 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
CCDC170-202ENST00000537358 NUP153P49790 1475 aaKnown RBP16.25■□□□□ 0.19
CCDC170-202ENST00000537358 UBTFP17480 764 aaKnown RBP16.25■□□□□ 0.19
CCDC170-202ENST00000537358 ARAP3Q8WWN8 1544 aa16.24■□□□□ 0.19
CCDC170-202ENST00000537358 PLEKHD1A6NEE1 506 aa16.24■□□□□ 0.19
CCDC170-202ENST00000537358 NEO1Q92859 1461 aa16.22■□□□□ 0.19
CCDC170-202ENST00000537358 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
CCDC170-202ENST00000537358 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
CCDC170-202ENST00000537358 FMN1Q68DA7 1419 aa16.16■□□□□ 0.18
CCDC170-202ENST00000537358 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
CCDC170-202ENST00000537358 HECW1Q76N89 1606 aa16.13■□□□□ 0.17
CCDC170-202ENST00000537358 RAPGEF3O95398 923 aa16.13■□□□□ 0.17
CCDC170-202ENST00000537358 CDK11AQ9UQ88 783 aaPredicted RBP16.12■□□□□ 0.17
CCDC170-202ENST00000537358 CDK13Q14004 1512 aaKnown RBP16.11■□□□□ 0.17
CCDC170-202ENST00000537358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.11■□□□□ 0.17
CCDC170-202ENST00000537358 FANCAO15360 1455 aa16.1■□□□□ 0.17
CCDC170-202ENST00000537358 DENND4BO75064 1496 aaPredicted RBP16.1■□□□□ 0.17
CCDC170-202ENST00000537358 ARHGAP35Q9NRY4 1499 aa16.1■□□□□ 0.17
CCDC170-202ENST00000537358 AKNAQ7Z591 1439 aa16.09■□□□□ 0.17
CCDC170-202ENST00000537358 TTC37Q6PGP7 1564 aa16.09■□□□□ 0.17
CCDC170-202ENST00000537358 ARID4BQ4LE39 1312 aaPredicted RBP16.08■□□□□ 0.16
CCDC170-202ENST00000537358 FRMPD1Q5SYB0 1578 aa16.07■□□□□ 0.16
CCDC170-202ENST00000537358 RICTORQ6R327 1708 aa16.06■□□□□ 0.16
CCDC170-202ENST00000537358 HECW2Q9P2P5 1572 aa16.06■□□□□ 0.16
CCDC170-202ENST00000537358 ARHGEF40Q8TER5 1519 aa16.04■□□□□ 0.16
CCDC170-202ENST00000537358 MSH5O43196 834 aa16.04■□□□□ 0.16
CCDC170-202ENST00000537358 MYO5CQ9NQX4 1742 aa16.04■□□□□ 0.16
CCDC170-202ENST00000537358 CLIP1P30622 1438 aa16.03■□□□□ 0.16
CCDC170-202ENST00000537358 ADAMTSL3P82987 1691 aa16.03■□□□□ 0.16
CCDC170-202ENST00000537358 KIF14Q15058 1648 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms