RNA–Protein interactions for RNA: ENST00000537345.5

ATP1A1-211, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ATP1A1, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-211ENST00000537345 TIAM1Q13009 1591 aa17.01■□□□□ 0.31
ATP1A1-211ENST00000537345 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
ATP1A1-211ENST00000537345 CUL7Q14999 1698 aa17■□□□□ 0.31
ATP1A1-211ENST00000537345 CFAP43Q8NDM7 1665 aa16.98■□□□□ 0.31
ATP1A1-211ENST00000537345 CTTNBP2Q8WZ74 1663 aa16.97■□□□□ 0.31
ATP1A1-211ENST00000537345 ABCA5Q8WWZ7 1642 aa16.95■□□□□ 0.3
ATP1A1-211ENST00000537345 PCF11O94913 1555 aaKnown RBP16.95■□□□□ 0.3
ATP1A1-211ENST00000537345 DHX57Q6P158 1386 aaKnown RBP16.94■□□□□ 0.3
ATP1A1-211ENST00000537345 KIF21AQ7Z4S6 1674 aa16.93■□□□□ 0.3
ATP1A1-211ENST00000537345 ITGAEP38570 1179 aa16.92■□□□□ 0.3
ATP1A1-211ENST00000537345 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
ATP1A1-211ENST00000537345 CCNB3Q8WWL7 1395 aa16.91■□□□□ 0.3
ATP1A1-211ENST00000537345 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
ATP1A1-211ENST00000537345 EFCAB5A4FU69 1503 aa16.89■□□□□ 0.3
ATP1A1-211ENST00000537345 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
ATP1A1-211ENST00000537345 FHAD1B1AJZ9 1412 aa16.86■□□□□ 0.29
ATP1A1-211ENST00000537345 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
ATP1A1-211ENST00000537345 FHOD3Q2V2M9 1422 aa16.84■□□□□ 0.29
ATP1A1-211ENST00000537345 SAMD9Q5K651 1589 aa16.84■□□□□ 0.29
ATP1A1-211ENST00000537345 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.297e-7■■■■■ 27.7
ATP1A1-211ENST00000537345 FYCO1Q9BQS8 1478 aa16.83■□□□□ 0.28
ATP1A1-211ENST00000537345 PHLDB1Q86UU1 1377 aa16.83■□□□□ 0.28
ATP1A1-211ENST00000537345 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.28
ATP1A1-211ENST00000537345 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
ATP1A1-211ENST00000537345 CASKIN1Q8WXD9 1431 aa16.81■□□□□ 0.28
ATP1A1-211ENST00000537345 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
ATP1A1-211ENST00000537345 GAPVD1Q14C86 1478 aa16.79■□□□□ 0.28
ATP1A1-211ENST00000537345 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
ATP1A1-211ENST00000537345 MAPKBP1O60336 1514 aa16.77■□□□□ 0.27
ATP1A1-211ENST00000537345 P3H3Q8IVL6 736 aa16.76■□□□□ 0.27
ATP1A1-211ENST00000537345 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
ATP1A1-211ENST00000537345 RAB3GAP2Q9H2M9 1393 aa16.73■□□□□ 0.27
ATP1A1-211ENST00000537345 MYT1Q01538 1121 aa16.73■□□□□ 0.27
ATP1A1-211ENST00000537345 FMN1Q68DA7 1419 aa16.7■□□□□ 0.26
ATP1A1-211ENST00000537345 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
ATP1A1-211ENST00000537345 KCNH8Q96L42 1107 aa16.68■□□□□ 0.26
ATP1A1-211ENST00000537345 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.67■□□□□ 0.26
ATP1A1-211ENST00000537345 SETD5Q9C0A6 1442 aa16.67■□□□□ 0.26
ATP1A1-211ENST00000537345 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
ATP1A1-211ENST00000537345 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
ATP1A1-211ENST00000537345 ATP1B4Q9UN42 357 aaPredicted RBP16.65■□□□□ 0.26
ATP1A1-211ENST00000537345 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
ATP1A1-211ENST00000537345 HIRIP3Q9BW71 556 aaPredicted RBP16.61■□□□□ 0.25
ATP1A1-211ENST00000537345 FGD6Q6ZV73 1430 aa16.61■□□□□ 0.25
ATP1A1-211ENST00000537345 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
ATP1A1-211ENST00000537345 MAGI3Q5TCQ9 1506 aa16.6■□□□□ 0.25
ATP1A1-211ENST00000537345 WDR62O43379 1518 aa16.58■□□□□ 0.25
ATP1A1-211ENST00000537345 IQGAP2Q13576 1575 aa16.58■□□□□ 0.24
ATP1A1-211ENST00000537345 SUPT6HQ7KZ85 1726 aaKnown RBP16.57■□□□□ 0.24
ATP1A1-211ENST00000537345 SIN3AQ96ST3 1273 aa16.57■□□□□ 0.24
ATP1A1-211ENST00000537345 FAM50AQ14320 339 aaKnown RBP16.57■□□□□ 0.24
ATP1A1-211ENST00000537345 EHBP1L1Q8N3D4 1523 aa16.56■□□□□ 0.24
ATP1A1-211ENST00000537345 PTPRKQ15262 1439 aa16.56■□□□□ 0.24
ATP1A1-211ENST00000537345 NCOA2Q15596 1464 aa16.56■□□□□ 0.24
ATP1A1-211ENST00000537345 UGGT2Q9NYU1 1516 aa16.55■□□□□ 0.24
ATP1A1-211ENST00000537345 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
ATP1A1-211ENST00000537345 HECW1Q76N89 1606 aa16.52■□□□□ 0.24
ATP1A1-211ENST00000537345 MYOM3Q5VTT5 1437 aa16.52■□□□□ 0.23
ATP1A1-211ENST00000537345 PTPN23Q9H3S7 1636 aa16.52■□□□□ 0.23
ATP1A1-211ENST00000537345 MTUS2Q5JR59 1369 aa16.51■□□□□ 0.23
ATP1A1-211ENST00000537345 CCDC18Q5T9S5 1454 aa16.51■□□□□ 0.23
ATP1A1-211ENST00000537345 IFT140Q96RY7 1462 aa16.51■□□□□ 0.23
ATP1A1-211ENST00000537345 HFM1A2PYH4 1435 aa16.49■□□□□ 0.23
ATP1A1-211ENST00000537345 SUPT16HQ9Y5B9 1047 aaKnown RBP16.48■□□□□ 0.23
ATP1A1-211ENST00000537345 EIF4G3O43432 1585 aaKnown RBP16.48■□□□□ 0.23
ATP1A1-211ENST00000537345 EPRSP07814 1512 aaKnown RBP16.47■□□□□ 0.23
ATP1A1-211ENST00000537345 TCOF1Q13428 1488 aaKnown RBP16.47■□□□□ 0.23
ATP1A1-211ENST00000537345 BCANQ96GW7 911 aa16.46■□□□□ 0.23
ATP1A1-211ENST00000537345 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.22
ATP1A1-211ENST00000537345 NAIPQ13075 1403 aa16.45■□□□□ 0.22
ATP1A1-211ENST00000537345 KIAA0556O60303 1618 aa16.44■□□□□ 0.22
ATP1A1-211ENST00000537345 DISP1Q96F81 1524 aa16.44■□□□□ 0.22
ATP1A1-211ENST00000537345 CDK13Q14004 1512 aaKnown RBP16.44■□□□□ 0.22
ATP1A1-211ENST00000537345 GCC2Q8IWJ2 1684 aa16.43■□□□□ 0.22
ATP1A1-211ENST00000537345 UACAQ9BZF9 1416 aa16.41■□□□□ 0.22
ATP1A1-211ENST00000537345 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
ATP1A1-211ENST00000537345 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
ATP1A1-211ENST00000537345 TIMELESSQ9UNS1 1208 aa16.38■□□□□ 0.21
ATP1A1-211ENST00000537345 KDM5BQ9UGL1 1544 aa16.38■□□□□ 0.21
ATP1A1-211ENST00000537345 DENND4BO75064 1496 aaPredicted RBP16.38■□□□□ 0.21
ATP1A1-211ENST00000537345 KDM6BO15054 1643 aa16.37■□□□□ 0.21
ATP1A1-211ENST00000537345 CEP170Q5SW79 1584 aa16.35■□□□□ 0.21
ATP1A1-211ENST00000537345 RAPGEF6Q8TEU7 1601 aa16.35■□□□□ 0.21
ATP1A1-211ENST00000537345 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
ATP1A1-211ENST00000537345 AKNAQ7Z591 1439 aa16.34■□□□□ 0.21
ATP1A1-211ENST00000537345 MIA2Q96PC5 1412 aa16.34■□□□□ 0.21
ATP1A1-211ENST00000537345 PPP1R15AO75807 674 aaPredicted RBP16.32■□□□□ 0.2
ATP1A1-211ENST00000537345 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
ATP1A1-211ENST00000537345 TRIM52Q96A61 297 aa16.31■□□□□ 0.2
ATP1A1-211ENST00000537345 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
ATP1A1-211ENST00000537345 DNMT1P26358 1616 aaKnown RBP16.28■□□□□ 0.2
ATP1A1-211ENST00000537345 ARID3CA6NKF2 412 aa16.27■□□□□ 0.2
ATP1A1-211ENST00000537345 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
ATP1A1-211ENST00000537345 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
ATP1A1-211ENST00000537345 ADCY10Q96PN6 1610 aa16.25■□□□□ 0.19
ATP1A1-211ENST00000537345 FKBP8Q14318 412 aa16.24■□□□□ 0.19
ATP1A1-211ENST00000537345 NUP160Q12769 1436 aa16.24■□□□□ 0.19
ATP1A1-211ENST00000537345 DAPK1P53355 1430 aa16.23■□□□□ 0.19
ATP1A1-211ENST00000537345 RRP7BPQ9NSQ0 103 aa16.22■□□□□ 0.19
ATP1A1-211ENST00000537345 ABCC5O15440 1437 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms