RNA–Protein interactions for RNA: ENST00000537022.5

COPS7A-206, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 4

Gene COPS7A, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-206ENST00000537022 CUL7Q14999 1698 aa24.21■■□□□ 1.47
COPS7A-206ENST00000537022 KIF27Q86VH2 1401 aa24.14■■□□□ 1.45
COPS7A-206ENST00000537022 KIAA0586Q9BVV6 1533 aa24.12■■□□□ 1.45
COPS7A-206ENST00000537022 IGF1RP08069 1367 aa24.11■■□□□ 1.45
COPS7A-206ENST00000537022 MAPKBP1O60336 1514 aa24.08■■□□□ 1.45
COPS7A-206ENST00000537022 ADCY10Q96PN6 1610 aa24.07■■□□□ 1.44
COPS7A-206ENST00000537022 ABCC10Q5T3U5 1492 aa24.02■■□□□ 1.44
COPS7A-206ENST00000537022 AEBP2Q6ZN18 517 aaPredicted RBP24.02■■□□□ 1.44
COPS7A-206ENST00000537022 DIP2BQ9P265 1576 aa24■■□□□ 1.43
COPS7A-206ENST00000537022 NPM1P06748 294 aaKnown RBP eCLIP23.99■■□□□ 1.43
COPS7A-206ENST00000537022 CARMIL1Q5VZK9 1371 aa23.95■■□□□ 1.42
COPS7A-206ENST00000537022 FAM69CQ0P6D2 419 aa23.91■■□□□ 1.42
COPS7A-206ENST00000537022 IQGAP2Q13576 1575 aa23.91■■□□□ 1.42
COPS7A-206ENST00000537022 CARMIL2Q6F5E8 1435 aa23.87■■□□□ 1.41
COPS7A-206ENST00000537022 PTPRGP23470 1445 aa23.86■■□□□ 1.41
COPS7A-206ENST00000537022 TSPOAP1O95153 1857 aa23.83■■□□□ 1.41
COPS7A-206ENST00000537022 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.41
COPS7A-206ENST00000537022 ABCC2Q92887 1545 aa23.81■■□□□ 1.4
COPS7A-206ENST00000537022 KDM6BO15054 1643 aa23.81■■□□□ 1.4
COPS7A-206ENST00000537022 UHRF1BP1LA0JNW5 1464 aa23.78■■□□□ 1.4
COPS7A-206ENST00000537022 RAPGEF2Q9Y4G8 1499 aa23.76■■□□□ 1.39
COPS7A-206ENST00000537022 DISP1Q96F81 1524 aa23.76■■□□□ 1.39
COPS7A-206ENST00000537022 UGGT2Q9NYU1 1516 aa23.74■■□□□ 1.39
COPS7A-206ENST00000537022 GLI2P10070 1586 aa23.73■■□□□ 1.39
COPS7A-206ENST00000537022 PLB1Q6P1J6 1458 aa23.72■■□□□ 1.39
COPS7A-206ENST00000537022 UACAQ9BZF9 1416 aa23.71■■□□□ 1.39
COPS7A-206ENST00000537022 ASXL2Q76L83 1435 aa23.7■■□□□ 1.38
COPS7A-206ENST00000537022 PPRC1Q5VV67 1664 aaKnown RBP23.69■■□□□ 1.38
COPS7A-206ENST00000537022 CTTNBP2Q8WZ74 1663 aa23.69■■□□□ 1.38
COPS7A-206ENST00000537022 KIAA0556O60303 1618 aa23.69■■□□□ 1.38
COPS7A-206ENST00000537022 TTBK1Q5TCY1 1321 aaPredicted RBP23.68■■□□□ 1.38
COPS7A-206ENST00000537022 KDM5BQ9UGL1 1544 aa23.66■■□□□ 1.38
COPS7A-206ENST00000537022 ZCCHC11Q5TAX3 1644 aaKnown RBP23.63■■□□□ 1.37
COPS7A-206ENST00000537022 MAP3K4Q9Y6R4 1608 aa23.61■■□□□ 1.37
COPS7A-206ENST00000537022 EPRSP07814 1512 aaKnown RBP23.58■■□□□ 1.36
COPS7A-206ENST00000537022 GOLGA3Q08378 1498 aa23.54■■□□□ 1.36
COPS7A-206ENST00000537022 TEX14Q8IWB6 1497 aa23.51■■□□□ 1.35
COPS7A-206ENST00000537022 PRXQ9BXM0 1461 aa23.5■■□□□ 1.35
COPS7A-206ENST00000537022 KDM4FA0A1W2PPD8 638 aa23.5■■□□□ 1.35
COPS7A-206ENST00000537022 WDR7Q9Y4E6 1490 aa23.49■■□□□ 1.35
COPS7A-206ENST00000537022 ABCA8O94911 1581 aa23.48■■□□□ 1.35
COPS7A-206ENST00000537022 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
COPS7A-206ENST00000537022 COL17A1Q9UMD9 1497 aaPredicted RBP23.43■■□□□ 1.34
COPS7A-206ENST00000537022 ADGRL1O94910 1474 aa23.36■■□□□ 1.33
COPS7A-206ENST00000537022 MAGI3Q5TCQ9 1506 aa23.36■■□□□ 1.33
COPS7A-206ENST00000537022 CD109Q6YHK3 1445 aa23.31■■□□□ 1.32
COPS7A-206ENST00000537022 SAMD9Q5K651 1589 aa23.31■■□□□ 1.32
COPS7A-206ENST00000537022 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
COPS7A-206ENST00000537022 KCNH8Q96L42 1107 aa23.24■■□□□ 1.31
COPS7A-206ENST00000537022 ATP10BO94823 1461 aa23.23■■□□□ 1.31
COPS7A-206ENST00000537022 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
COPS7A-206ENST00000537022 ABCA9Q8IUA7 1624 aa23.22■■□□□ 1.31
COPS7A-206ENST00000537022 RAPGEF6Q8TEU7 1601 aa23.22■■□□□ 1.31
COPS7A-206ENST00000537022 EEA1Q15075 1411 aa23.2■■□□□ 1.3
COPS7A-206ENST00000537022 ARAP3Q8WWN8 1544 aa23.18■■□□□ 1.3
COPS7A-206ENST00000537022 P3H3Q8IVL6 736 aa23.16■■□□□ 1.3
COPS7A-206ENST00000537022 KIF21BO75037 1637 aa23.13■■□□□ 1.29
COPS7A-206ENST00000537022 PHLDB1Q86UU1 1377 aa23.13■■□□□ 1.29
COPS7A-206ENST00000537022 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
COPS7A-206ENST00000537022 ARID3CA6NKF2 412 aa23.09■■□□□ 1.29
COPS7A-206ENST00000537022 NUP153P49790 1475 aaKnown RBP23.08■■□□□ 1.29
COPS7A-206ENST00000537022 NEO1Q92859 1461 aa23.07■■□□□ 1.28
COPS7A-206ENST00000537022 EFCAB5A4FU69 1503 aa23.04■■□□□ 1.28
COPS7A-206ENST00000537022 FHOD3Q2V2M9 1422 aa23.03■■□□□ 1.28
COPS7A-206ENST00000537022 FRMPD1Q5SYB0 1578 aa23■■□□□ 1.27
COPS7A-206ENST00000537022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
COPS7A-206ENST00000537022 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
COPS7A-206ENST00000537022 ADAMTSL3P82987 1691 aa22.97■■□□□ 1.27
COPS7A-206ENST00000537022 CFAP74Q9C0B2 1584 aa22.97■■□□□ 1.27
COPS7A-206ENST00000537022 RICTORQ6R327 1708 aa22.94■■□□□ 1.26
COPS7A-206ENST00000537022 BCORL1Q5H9F3 1711 aa22.92■■□□□ 1.26
COPS7A-206ENST00000537022 RAPGEF3O95398 923 aa22.92■■□□□ 1.26
COPS7A-206ENST00000537022 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
COPS7A-206ENST00000537022 PLEKHD1A6NEE1 506 aa22.91■■□□□ 1.26
COPS7A-206ENST00000537022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.91■■□□□ 1.26
COPS7A-206ENST00000537022 ARHGEF40Q8TER5 1519 aa22.9■■□□□ 1.26
COPS7A-206ENST00000537022 TTC37Q6PGP7 1564 aa22.89■■□□□ 1.25
COPS7A-206ENST00000537022 PTPRMP28827 1452 aa22.87■■□□□ 1.25
COPS7A-206ENST00000537022 ILDR1Q86SU0 546 aaPredicted RBP22.87■■□□□ 1.25
COPS7A-206ENST00000537022 FANCAO15360 1455 aa22.86■■□□□ 1.25
COPS7A-206ENST00000537022 DENND4BO75064 1496 aaPredicted RBP22.86■■□□□ 1.25
COPS7A-206ENST00000537022 AKNAQ7Z591 1439 aa22.85■■□□□ 1.25
COPS7A-206ENST00000537022 ZMYM4Q5VZL5 1548 aa22.84■■□□□ 1.25
COPS7A-206ENST00000537022 MADDQ8WXG6 1647 aa22.84■■□□□ 1.25
COPS7A-206ENST00000537022 CDK13Q14004 1512 aaKnown RBP22.83■■□□□ 1.25
COPS7A-206ENST00000537022 HECW1Q76N89 1606 aa22.82■■□□□ 1.24
COPS7A-206ENST00000537022 FMN1Q68DA7 1419 aa22.79■■□□□ 1.24
COPS7A-206ENST00000537022 MYO5CQ9NQX4 1742 aa22.77■■□□□ 1.24
COPS7A-206ENST00000537022 MAGI2Q86UL8 1455 aa22.76■■□□□ 1.23
COPS7A-206ENST00000537022 ARHGAP35Q9NRY4 1499 aa22.76■■□□□ 1.23
COPS7A-206ENST00000537022 RIMS1Q86UR5 1692 aaKnown RBP22.76■■□□□ 1.23
COPS7A-206ENST00000537022 ZFYVE16Q7Z3T8 1539 aa22.76■■□□□ 1.23
COPS7A-206ENST00000537022 ARID4BQ4LE39 1312 aaPredicted RBP22.75■■□□□ 1.23
COPS7A-206ENST00000537022 PLCH2O75038 1416 aa22.74■■□□□ 1.23
COPS7A-206ENST00000537022 SIGLEC1Q9BZZ2 1709 aa22.73■■□□□ 1.23
COPS7A-206ENST00000537022 PCF11O94913 1555 aaKnown RBP22.72■■□□□ 1.23
COPS7A-206ENST00000537022 UBTFP17480 764 aaKnown RBP22.72■■□□□ 1.23
COPS7A-206ENST00000537022 POGZQ7Z3K3 1410 aa22.71■■□□□ 1.23
COPS7A-206ENST00000537022 LRRIQ1Q96JM4 1722 aa22.7■■□□□ 1.22
COPS7A-206ENST00000537022 KIF14Q15058 1648 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms