RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 IGF1RP08069 1367 aa21.66■■□□□ 1.06
PRKDC-207ENST00000536483 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
PRKDC-207ENST00000536483 KIF13AQ9H1H9 1805 aa21.6■■□□□ 1.05
PRKDC-207ENST00000536483 NPM1P06748 294 aaKnown RBP eCLIP21.6■■□□□ 1.05
PRKDC-207ENST00000536483 KIAA0586Q9BVV6 1533 aa21.6■■□□□ 1.05
PRKDC-207ENST00000536483 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
PRKDC-207ENST00000536483 CUL7Q14999 1698 aa21.54■■□□□ 1.04
PRKDC-207ENST00000536483 ABCC10Q5T3U5 1492 aa21.54■■□□□ 1.04
PRKDC-207ENST00000536483 ADCY10Q96PN6 1610 aa21.52■■□□□ 1.04
PRKDC-207ENST00000536483 MAPKBP1O60336 1514 aa21.51■■□□□ 1.03
PRKDC-207ENST00000536483 CARMIL1Q5VZK9 1371 aa21.5■■□□□ 1.03
PRKDC-207ENST00000536483 DIP2BQ9P265 1576 aa21.46■■□□□ 1.03
PRKDC-207ENST00000536483 TTBK1Q5TCY1 1321 aaPredicted RBP21.46■■□□□ 1.03
PRKDC-207ENST00000536483 PTPRGP23470 1445 aa21.45■■□□□ 1.02
PRKDC-207ENST00000536483 CARMIL2Q6F5E8 1435 aa21.38■■□□□ 1.01
PRKDC-207ENST00000536483 TNIKQ9UKE5 1360 aa21.38■■□□□ 1.01
PRKDC-207ENST00000536483 IQGAP2Q13576 1575 aa21.34■■□□□ 1.01
PRKDC-207ENST00000536483 TSPOAP1O95153 1857 aa21.32■■□□□ 1
PRKDC-207ENST00000536483 ABCC2Q92887 1545 aa21.31■■□□□ 1
PRKDC-207ENST00000536483 KDM6BO15054 1643 aa21.3■■□□□ 1
PRKDC-207ENST00000536483 DISP1Q96F81 1524 aa21.28■■□□□ 1
PRKDC-207ENST00000536483 ASXL2Q76L83 1435 aa21.28■■□□□ 1
PRKDC-207ENST00000536483 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
PRKDC-207ENST00000536483 UACAQ9BZF9 1416 aa21.27■■□□□ 1
PRKDC-207ENST00000536483 UHRF1BP1LA0JNW5 1464 aa21.26■□□□□ 0.99
PRKDC-207ENST00000536483 PLB1Q6P1J6 1458 aa21.25■□□□□ 0.99
PRKDC-207ENST00000536483 UGGT2Q9NYU1 1516 aa21.22■□□□□ 0.99
PRKDC-207ENST00000536483 KDM4FA0A1W2PPD8 638 aa21.21■□□□□ 0.99
PRKDC-207ENST00000536483 GLI2P10070 1586 aa21.19■□□□□ 0.98
PRKDC-207ENST00000536483 KDM5BQ9UGL1 1544 aa21.17■□□□□ 0.98
PRKDC-207ENST00000536483 KIAA0556O60303 1618 aa21.16■□□□□ 0.98
PRKDC-207ENST00000536483 PPRC1Q5VV67 1664 aaKnown RBP21.15■□□□□ 0.98
PRKDC-207ENST00000536483 EPRSP07814 1512 aaKnown RBP21.14■□□□□ 0.97
PRKDC-207ENST00000536483 ZCCHC11Q5TAX3 1644 aaKnown RBP21.11■□□□□ 0.97
PRKDC-207ENST00000536483 COL17A1Q9UMD9 1497 aaPredicted RBP21.07■□□□□ 0.96
PRKDC-207ENST00000536483 MAP3K4Q9Y6R4 1608 aa21.06■□□□□ 0.96
PRKDC-207ENST00000536483 CTTNBP2Q8WZ74 1663 aa21.05■□□□□ 0.96
PRKDC-207ENST00000536483 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
PRKDC-207ENST00000536483 TEX14Q8IWB6 1497 aa21.03■□□□□ 0.96
PRKDC-207ENST00000536483 PRXQ9BXM0 1461 aa21.03■□□□□ 0.96
PRKDC-207ENST00000536483 WDR7Q9Y4E6 1490 aa21.03■□□□□ 0.96
PRKDC-207ENST00000536483 KCNH8Q96L42 1107 aa20.99■□□□□ 0.95
PRKDC-207ENST00000536483 ABCA8O94911 1581 aa20.98■□□□□ 0.95
PRKDC-207ENST00000536483 ADGRL1O94910 1474 aa20.97■□□□□ 0.95
PRKDC-207ENST00000536483 EEA1Q15075 1411 aa20.95■□□□□ 0.94
PRKDC-207ENST00000536483 CD109Q6YHK3 1445 aa20.95■□□□□ 0.94
PRKDC-207ENST00000536483 P3H3Q8IVL6 736 aa20.93■□□□□ 0.94
PRKDC-207ENST00000536483 CSRNP3Q8WYN3 585 aa20.93■□□□□ 0.94
PRKDC-207ENST00000536483 ARID3CA6NKF2 412 aa20.91■□□□□ 0.94
PRKDC-207ENST00000536483 MAGI3Q5TCQ9 1506 aa20.9■□□□□ 0.94
PRKDC-207ENST00000536483 FAM9AQ8IZU1 332 aaPredicted RBP20.88■□□□□ 0.93
PRKDC-207ENST00000536483 CFAP43Q8NDM7 1665 aa20.88■□□□□ 0.93
PRKDC-207ENST00000536483 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
PRKDC-207ENST00000536483 ATP10BO94823 1461 aa20.84■□□□□ 0.93
PRKDC-207ENST00000536483 SAMD9Q5K651 1589 aa20.77■□□□□ 0.92
PRKDC-207ENST00000536483 RANGAP1P46060 587 aaPredicted RBP20.76■□□□□ 0.91
PRKDC-207ENST00000536483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.75■□□□□ 0.91
PRKDC-207ENST00000536483 HNRNPUL2Q1KMD3 747 aaKnown RBP20.75■□□□□ 0.91
PRKDC-207ENST00000536483 ARAP3Q8WWN8 1544 aa20.73■□□□□ 0.91
PRKDC-207ENST00000536483 RAPGEF6Q8TEU7 1601 aa20.72■□□□□ 0.91
PRKDC-207ENST00000536483 HECW2Q9P2P5 1572 aa20.72■□□□□ 0.91
PRKDC-207ENST00000536483 ABCA9Q8IUA7 1624 aa20.71■□□□□ 0.91
PRKDC-207ENST00000536483 KIF21BO75037 1637 aa20.69■□□□□ 0.9
PRKDC-207ENST00000536483 ILDR1Q86SU0 546 aaPredicted RBP20.69■□□□□ 0.9
PRKDC-207ENST00000536483 PHLDB1Q86UU1 1377 aa20.69■□□□□ 0.9
PRKDC-207ENST00000536483 RAPGEF3O95398 923 aa20.68■□□□□ 0.9
PRKDC-207ENST00000536483 FHOD3Q2V2M9 1422 aa20.68■□□□□ 0.9
PRKDC-207ENST00000536483 NUP153P49790 1475 aaKnown RBP20.68■□□□□ 0.9
PRKDC-207ENST00000536483 NEO1Q92859 1461 aa20.63■□□□□ 0.89
PRKDC-207ENST00000536483 PLEKHD1A6NEE1 506 aa20.61■□□□□ 0.89
PRKDC-207ENST00000536483 FRMPD1Q5SYB0 1578 aa20.55■□□□□ 0.88
PRKDC-207ENST00000536483 ARID4BQ4LE39 1312 aaPredicted RBP20.54■□□□□ 0.88
PRKDC-207ENST00000536483 EFCAB5A4FU69 1503 aa20.53■□□□□ 0.88
PRKDC-207ENST00000536483 PTPRMP28827 1452 aa20.53■□□□□ 0.88
PRKDC-207ENST00000536483 ADAMTSL3P82987 1691 aa20.52■□□□□ 0.88
PRKDC-207ENST00000536483 EHMT2Q96KQ7 1210 aa20.52■□□□□ 0.88
PRKDC-207ENST00000536483 AKNAQ7Z591 1439 aa20.52■□□□□ 0.87
PRKDC-207ENST00000536483 DENND4BO75064 1496 aaPredicted RBP20.51■□□□□ 0.87
PRKDC-207ENST00000536483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.5■□□□□ 0.87
PRKDC-207ENST00000536483 FANCAO15360 1455 aa20.5■□□□□ 0.87
PRKDC-207ENST00000536483 UBTFP17480 764 aaKnown RBP20.47■□□□□ 0.87
PRKDC-207ENST00000536483 CDK13Q14004 1512 aaKnown RBP20.47■□□□□ 0.87
PRKDC-207ENST00000536483 BCORL1Q5H9F3 1711 aa20.47■□□□□ 0.87
PRKDC-207ENST00000536483 TTC37Q6PGP7 1564 aa20.46■□□□□ 0.87
PRKDC-207ENST00000536483 ATP1B4Q9UN42 357 aaPredicted RBP20.45■□□□□ 0.86
PRKDC-207ENST00000536483 RICTORQ6R327 1708 aa20.44■□□□□ 0.86
PRKDC-207ENST00000536483 ARHGEF40Q8TER5 1519 aa20.44■□□□□ 0.86
PRKDC-207ENST00000536483 MADDQ8WXG6 1647 aa20.44■□□□□ 0.86
PRKDC-207ENST00000536483 CFAP74Q9C0B2 1584 aa20.43■□□□□ 0.86
PRKDC-207ENST00000536483 PLCH2O75038 1416 aa20.39■□□□□ 0.85
PRKDC-207ENST00000536483 YEATS2Q9ULM3 1422 aa20.39■□□□□ 0.85
PRKDC-207ENST00000536483 FMN1Q68DA7 1419 aa20.38■□□□□ 0.85
PRKDC-207ENST00000536483 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
PRKDC-207ENST00000536483 ARHGAP35Q9NRY4 1499 aa20.37■□□□□ 0.85
PRKDC-207ENST00000536483 SCAPERQ9BY12 1400 aa20.37■□□□□ 0.85
PRKDC-207ENST00000536483 ZFYVE16Q7Z3T8 1539 aa20.37■□□□□ 0.85
PRKDC-207ENST00000536483 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
PRKDC-207ENST00000536483 RIMS1Q86UR5 1692 aaKnown RBP20.35■□□□□ 0.85
PRKDC-207ENST00000536483 MAGI2Q86UL8 1455 aa20.35■□□□□ 0.85
PRKDC-207ENST00000536483 POGZQ7Z3K3 1410 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms