RNA–Protein interactions for RNA: ENST00000536411.1

SCNN1A-209, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-209ENST00000536411 JPH4Q96JJ6 628 aa24.08■■□□□ 1.45
SCNN1A-209ENST00000536411 PRG4Q92954 1404 aaPredicted RBP24.06■■□□□ 1.44
SCNN1A-209ENST00000536411 RAPGEF2Q9Y4G8 1499 aa24.02■■□□□ 1.44
SCNN1A-209ENST00000536411 ERCC6L2Q5T890 1561 aa23.98■■□□□ 1.43
SCNN1A-209ENST00000536411 CARMIL2Q6F5E8 1435 aa23.94■■□□□ 1.42
SCNN1A-209ENST00000536411 IQGAP2Q13576 1575 aa23.94■■□□□ 1.42
SCNN1A-209ENST00000536411 EEA1Q15075 1411 aa23.93■■□□□ 1.42
SCNN1A-209ENST00000536411 TRHP20396 242 aaPredicted RBP23.9■■□□□ 1.42
SCNN1A-209ENST00000536411 PRXQ9BXM0 1461 aa23.84■■□□□ 1.41
SCNN1A-209ENST00000536411 TNIKQ9UKE5 1360 aa23.81■■□□□ 1.4
SCNN1A-209ENST00000536411 NPM1P06748 294 aaKnown RBP eCLIP23.81■■□□□ 1.4
SCNN1A-209ENST00000536411 UGGT2Q9NYU1 1516 aa23.8■■□□□ 1.4
SCNN1A-209ENST00000536411 PTPRGP23470 1445 aa23.78■■□□□ 1.4
SCNN1A-209ENST00000536411 CTTNBP2Q8WZ74 1663 aa23.78■■□□□ 1.4
SCNN1A-209ENST00000536411 CSRNP3Q8WYN3 585 aa23.76■■□□□ 1.39
SCNN1A-209ENST00000536411 GOLGA3Q08378 1498 aa23.75■■□□□ 1.39
SCNN1A-209ENST00000536411 MAPKBP1O60336 1514 aa23.7■■□□□ 1.38
SCNN1A-209ENST00000536411 DISP1Q96F81 1524 aa23.7■■□□□ 1.38
SCNN1A-209ENST00000536411 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.38
SCNN1A-209ENST00000536411 KIAA0556O60303 1618 aa23.69■■□□□ 1.38
SCNN1A-209ENST00000536411 ADCY10Q96PN6 1610 aa23.68■■□□□ 1.38
SCNN1A-209ENST00000536411 UHRF1BP1LA0JNW5 1464 aa23.66■■□□□ 1.38
SCNN1A-209ENST00000536411 UACAQ9BZF9 1416 aa23.63■■□□□ 1.37
SCNN1A-209ENST00000536411 ABCC2Q92887 1545 aa23.62■■□□□ 1.37
SCNN1A-209ENST00000536411 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
SCNN1A-209ENST00000536411 ABCC10Q5T3U5 1492 aa23.58■■□□□ 1.37
SCNN1A-209ENST00000536411 KIF21BO75037 1637 aa23.58■■□□□ 1.36
SCNN1A-209ENST00000536411 TTBK1Q5TCY1 1321 aaPredicted RBP23.55■■□□□ 1.36
SCNN1A-209ENST00000536411 PLB1Q6P1J6 1458 aa23.54■■□□□ 1.36
SCNN1A-209ENST00000536411 KDM5BQ9UGL1 1544 aa23.5■■□□□ 1.35
SCNN1A-209ENST00000536411 KIF13AQ9H1H9 1805 aa23.49■■□□□ 1.35
SCNN1A-209ENST00000536411 DIP2BQ9P265 1576 aa23.49■■□□□ 1.35
SCNN1A-209ENST00000536411 FAM69CQ0P6D2 419 aa23.48■■□□□ 1.35
SCNN1A-209ENST00000536411 SAMD9Q5K651 1589 aa23.45■■□□□ 1.34
SCNN1A-209ENST00000536411 ASXL2Q76L83 1435 aa23.44■■□□□ 1.34
SCNN1A-209ENST00000536411 ABCA8O94911 1581 aa23.43■■□□□ 1.34
SCNN1A-209ENST00000536411 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
SCNN1A-209ENST00000536411 GLI2P10070 1586 aa23.4■■□□□ 1.34
SCNN1A-209ENST00000536411 ZCCHC11Q5TAX3 1644 aaKnown RBP23.4■■□□□ 1.34
SCNN1A-209ENST00000536411 WDR7Q9Y4E6 1490 aa23.34■■□□□ 1.33
SCNN1A-209ENST00000536411 UBTFP17480 764 aaKnown RBP23.33■■□□□ 1.33
SCNN1A-209ENST00000536411 EPRSP07814 1512 aaKnown RBP23.31■■□□□ 1.32
SCNN1A-209ENST00000536411 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
SCNN1A-209ENST00000536411 RAPGEF6Q8TEU7 1601 aa23.29■■□□□ 1.32
SCNN1A-209ENST00000536411 TEX14Q8IWB6 1497 aa23.28■■□□□ 1.32
SCNN1A-209ENST00000536411 FHOD3Q2V2M9 1422 aa23.24■■□□□ 1.31
SCNN1A-209ENST00000536411 MAP3K4Q9Y6R4 1608 aa23.22■■□□□ 1.31
SCNN1A-209ENST00000536411 KDM6BO15054 1643 aa23.22■■□□□ 1.31
SCNN1A-209ENST00000536411 FMN1Q68DA7 1419 aa23.21■■□□□ 1.31
SCNN1A-209ENST00000536411 TSPOAP1O95153 1857 aa23.21■■□□□ 1.31
SCNN1A-209ENST00000536411 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.3
SCNN1A-209ENST00000536411 ATP10BO94823 1461 aa23.19■■□□□ 1.3
SCNN1A-209ENST00000536411 CFAP43Q8NDM7 1665 aa23.19■■□□□ 1.3
SCNN1A-209ENST00000536411 NUP153P49790 1475 aaKnown RBP23.15■■□□□ 1.3
SCNN1A-209ENST00000536411 MAGI3Q5TCQ9 1506 aa23.13■■□□□ 1.29
SCNN1A-209ENST00000536411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
SCNN1A-209ENST00000536411 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
SCNN1A-209ENST00000536411 CD109Q6YHK3 1445 aa23.13■■□□□ 1.29
SCNN1A-209ENST00000536411 PPRC1Q5VV67 1664 aaKnown RBP23.13■■□□□ 1.29
SCNN1A-209ENST00000536411 ARHGAP35Q9NRY4 1499 aa23.11■■□□□ 1.29
SCNN1A-209ENST00000536411 KCNH8Q96L42 1107 aa23.1■■□□□ 1.29
SCNN1A-209ENST00000536411 HECW1Q76N89 1606 aa23.09■■□□□ 1.29
SCNN1A-209ENST00000536411 PLEKHD1A6NEE1 506 aa23.08■■□□□ 1.29
SCNN1A-209ENST00000536411 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.29
SCNN1A-209ENST00000536411 PHLDB1Q86UU1 1377 aa23.07■■□□□ 1.28
SCNN1A-209ENST00000536411 ABCA9Q8IUA7 1624 aa23.06■■□□□ 1.28
SCNN1A-209ENST00000536411 ARID3CA6NKF2 412 aa23.05■■□□□ 1.28
SCNN1A-209ENST00000536411 CDK11AQ9UQ88 783 aaPredicted RBP23.04■■□□□ 1.28
SCNN1A-209ENST00000536411 NEO1Q92859 1461 aa22.97■■□□□ 1.27
SCNN1A-209ENST00000536411 CLIP1P30622 1438 aa22.96■■□□□ 1.27
SCNN1A-209ENST00000536411 CCDC18Q5T9S5 1454 aa22.96■■□□□ 1.27
SCNN1A-209ENST00000536411 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
SCNN1A-209ENST00000536411 CFAP74Q9C0B2 1584 aa22.93■■□□□ 1.26
SCNN1A-209ENST00000536411 ARAP3Q8WWN8 1544 aa22.93■■□□□ 1.26
SCNN1A-209ENST00000536411 CASKIN1Q8WXD9 1431 aa22.93■■□□□ 1.26
SCNN1A-209ENST00000536411 ATP1B4Q9UN42 357 aaPredicted RBP22.93■■□□□ 1.26
SCNN1A-209ENST00000536411 CDK13Q14004 1512 aaKnown RBP22.92■■□□□ 1.26
SCNN1A-209ENST00000536411 FYCO1Q9BQS8 1478 aa22.91■■□□□ 1.26
SCNN1A-209ENST00000536411 COL17A1Q9UMD9 1497 aaPredicted RBP22.87■■□□□ 1.25
SCNN1A-209ENST00000536411 TROQ12816 1431 aaPredicted RBP22.86■■□□□ 1.25
SCNN1A-209ENST00000536411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.86■■□□□ 1.25
SCNN1A-209ENST00000536411 KIF14Q15058 1648 aa22.86■■□□□ 1.25
SCNN1A-209ENST00000536411 PCF11O94913 1555 aaKnown RBP22.84■■□□□ 1.25
SCNN1A-209ENST00000536411 FANCAO15360 1455 aa22.81■■□□□ 1.24
SCNN1A-209ENST00000536411 TTC37Q6PGP7 1564 aa22.8■■□□□ 1.24
SCNN1A-209ENST00000536411 CEP162Q5TB80 1403 aa22.79■■□□□ 1.24
SCNN1A-209ENST00000536411 PLCH2O75038 1416 aa22.78■■□□□ 1.24
SCNN1A-209ENST00000536411 AKNAQ7Z591 1439 aa22.77■■□□□ 1.24
SCNN1A-209ENST00000536411 DENND4BO75064 1496 aaPredicted RBP22.76■■□□□ 1.23
SCNN1A-209ENST00000536411 MYO5CQ9NQX4 1742 aa22.76■■□□□ 1.23
SCNN1A-209ENST00000536411 EFCAB2Q5VUJ9 269 aa22.73■■□□□ 1.23
SCNN1A-209ENST00000536411 LRRIQ1Q96JM4 1722 aa22.72■■□□□ 1.23
SCNN1A-209ENST00000536411 ADGRL1O94910 1474 aa22.69■■□□□ 1.22
SCNN1A-209ENST00000536411 MAGI2Q86UL8 1455 aa22.68■■□□□ 1.22
SCNN1A-209ENST00000536411 ARHGAP5Q13017 1502 aa22.67■■□□□ 1.22
SCNN1A-209ENST00000536411 RAPGEF3O95398 923 aa22.66■■□□□ 1.22
SCNN1A-209ENST00000536411 ZMYM4Q5VZL5 1548 aa22.66■■□□□ 1.22
SCNN1A-209ENST00000536411 FRMPD1Q5SYB0 1578 aa22.65■■□□□ 1.22
SCNN1A-209ENST00000536411 RICTORQ6R327 1708 aa22.65■■□□□ 1.22
SCNN1A-209ENST00000536411 MTUS2Q5JR59 1369 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms