RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 PRXQ9BXM0 1461 aa29.97■■■□□ 2.39
DDX55-204ENST00000536079 ERCC6L2Q5T890 1561 aa29.94■■■□□ 2.38
DDX55-204ENST00000536079 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
DDX55-204ENST00000536079 JPH4Q96JJ6 628 aa29.92■■■□□ 2.38
DDX55-204ENST00000536079 SHROOM2Q13796 1616 aa29.92■■■□□ 2.38
DDX55-204ENST00000536079 KIAA0586Q9BVV6 1533 aa29.91■■■□□ 2.38
DDX55-204ENST00000536079 EEA1Q15075 1411 aa29.91■■■□□ 2.38
DDX55-204ENST00000536079 CYB5RLQ6IPT4 315 aa29.88■■■□□ 2.37
DDX55-204ENST00000536079 PRG4Q92954 1404 aaPredicted RBP29.84■■■□□ 2.37
DDX55-204ENST00000536079 IQGAP2Q13576 1575 aa29.73■■■□□ 2.35
DDX55-204ENST00000536079 EHMT2Q96KQ7 1210 aa29.66■■■□□ 2.34
DDX55-204ENST00000536079 KIF21BO75037 1637 aa29.63■■■□□ 2.33
DDX55-204ENST00000536079 CTTNBP2Q8WZ74 1663 aa29.63■■■□□ 2.33
DDX55-204ENST00000536079 UGGT2Q9NYU1 1516 aa29.61■■■□□ 2.33
DDX55-204ENST00000536079 DISP1Q96F81 1524 aa29.61■■■□□ 2.33
DDX55-204ENST00000536079 CARMIL2Q6F5E8 1435 aa29.54■■■□□ 2.32
DDX55-204ENST00000536079 TTBK1Q5TCY1 1321 aaPredicted RBP29.52■■■□□ 2.32
DDX55-204ENST00000536079 TNIKQ9UKE5 1360 aa29.5■■■□□ 2.31
DDX55-204ENST00000536079 GOLGA3Q08378 1498 aa29.48■■■□□ 2.31
DDX55-204ENST00000536079 PTPRGP23470 1445 aa29.48■■■□□ 2.31
DDX55-204ENST00000536079 KIAA0556O60303 1618 aa29.48■■■□□ 2.31
DDX55-204ENST00000536079 UBTFP17480 764 aaKnown RBP29.44■■■□□ 2.3
DDX55-204ENST00000536079 RANGAP1P46060 587 aaPredicted RBP29.44■■■□□ 2.3
DDX55-204ENST00000536079 P3H3Q8IVL6 736 aa29.41■■■□□ 2.3
DDX55-204ENST00000536079 ADCY10Q96PN6 1610 aa29.36■■■□□ 2.29
DDX55-204ENST00000536079 SAMD9Q5K651 1589 aa29.33■■■□□ 2.29
DDX55-204ENST00000536079 UACAQ9BZF9 1416 aa29.28■■■□□ 2.28
DDX55-204ENST00000536079 PLB1Q6P1J6 1458 aa29.25■■■□□ 2.27
DDX55-204ENST00000536079 FHOD3Q2V2M9 1422 aa29.24■■■□□ 2.27
DDX55-204ENST00000536079 UHRF1BP1LA0JNW5 1464 aa29.23■■■□□ 2.27
DDX55-204ENST00000536079 ABCC2Q92887 1545 aa29.2■■■□□ 2.27
DDX55-204ENST00000536079 ABCA8O94911 1581 aa29.18■■■□□ 2.26
DDX55-204ENST00000536079 LOC105371045A0A1W2PR82 267 aa29.18■■■□□ 2.26
DDX55-204ENST00000536079 NPM1P06748 294 aaKnown RBP eCLIP29.17■■■□□ 2.26
DDX55-204ENST00000536079 TRHP20396 242 aaPredicted RBP29.17■■■□□ 2.26
DDX55-204ENST00000536079 ARHGAP35Q9NRY4 1499 aa29.17■■■□□ 2.26
DDX55-204ENST00000536079 EFCAB5A4FU69 1503 aa29.16■■■□□ 2.26
DDX55-204ENST00000536079 KDM5BQ9UGL1 1544 aa29.1■■■□□ 2.25
DDX55-204ENST00000536079 MAPKBP1O60336 1514 aa29.09■■■□□ 2.25
DDX55-204ENST00000536079 ARID3CA6NKF2 412 aa29.07■■■□□ 2.24
DDX55-204ENST00000536079 ZCCHC11Q5TAX3 1644 aaKnown RBP29.03■■■□□ 2.24
DDX55-204ENST00000536079 ASXL2Q76L83 1435 aa29.02■■■□□ 2.24
DDX55-204ENST00000536079 RAPGEF6Q8TEU7 1601 aa29.01■■■□□ 2.23
DDX55-204ENST00000536079 CLIP1P30622 1438 aa28.99■■■□□ 2.23
DDX55-204ENST00000536079 ATP10BO94823 1461 aa28.98■■■□□ 2.23
DDX55-204ENST00000536079 NUP153P49790 1475 aaKnown RBP28.97■■■□□ 2.23
DDX55-204ENST00000536079 ABCC10Q5T3U5 1492 aa28.97■■■□□ 2.23
DDX55-204ENST00000536079 FAM69CQ0P6D2 419 aa28.95■■■□□ 2.22
DDX55-204ENST00000536079 DIP2BQ9P265 1576 aa28.92■■■□□ 2.22
DDX55-204ENST00000536079 KIF13AQ9H1H9 1805 aa28.92■■■□□ 2.22
DDX55-204ENST00000536079 CEP162Q5TB80 1403 aa28.91■■■□□ 2.22
DDX55-204ENST00000536079 FMN1Q68DA7 1419 aa28.91■■■□□ 2.22
DDX55-204ENST00000536079 WDR7Q9Y4E6 1490 aa28.85■■■□□ 2.21
DDX55-204ENST00000536079 EPRSP07814 1512 aaKnown RBP28.84■■■□□ 2.21
DDX55-204ENST00000536079 ATP1B4Q9UN42 357 aaPredicted RBP28.83■■■□□ 2.21
DDX55-204ENST00000536079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.82■■■□□ 2.2
DDX55-204ENST00000536079 HNRNPUL2Q1KMD3 747 aaKnown RBP28.82■■■□□ 2.2
DDX55-204ENST00000536079 CDK13Q14004 1512 aaKnown RBP28.8■■■□□ 2.2
DDX55-204ENST00000536079 KCNH8Q96L42 1107 aa28.8■■■□□ 2.2
DDX55-204ENST00000536079 GLI2P10070 1586 aa28.77■■■□□ 2.2
DDX55-204ENST00000536079 PCF11O94913 1555 aaKnown RBP28.76■■■□□ 2.19
DDX55-204ENST00000536079 CASKIN1Q8WXD9 1431 aa28.76■■■□□ 2.19
DDX55-204ENST00000536079 HECW1Q76N89 1606 aa28.74■■■□□ 2.19
DDX55-204ENST00000536079 LRRIQ1Q96JM4 1722 aa28.71■■■□□ 2.19
DDX55-204ENST00000536079 PLEKHD1A6NEE1 506 aa28.67■■■□□ 2.18
DDX55-204ENST00000536079 TSPOAP1O95153 1857 aa28.66■■■□□ 2.18
DDX55-204ENST00000536079 MAP3K4Q9Y6R4 1608 aa28.65■■■□□ 2.18
DDX55-204ENST00000536079 FYCO1Q9BQS8 1478 aa28.65■■■□□ 2.18
DDX55-204ENST00000536079 PPRC1Q5VV67 1664 aaKnown RBP28.64■■■□□ 2.17
DDX55-204ENST00000536079 CD109Q6YHK3 1445 aa28.6■■■□□ 2.17
DDX55-204ENST00000536079 MAGI3Q5TCQ9 1506 aa28.55■■■□□ 2.16
DDX55-204ENST00000536079 CCDC18Q5T9S5 1454 aa28.55■■■□□ 2.16
DDX55-204ENST00000536079 ABCA9Q8IUA7 1624 aa28.54■■■□□ 2.16
DDX55-204ENST00000536079 CFAP43Q8NDM7 1665 aa28.53■■■□□ 2.16
DDX55-204ENST00000536079 VPS8Q8N3P4 1428 aa28.52■■■□□ 2.16
DDX55-204ENST00000536079 TROQ12816 1431 aaPredicted RBP28.52■■■□□ 2.16
DDX55-204ENST00000536079 CDK11AQ9UQ88 783 aaPredicted RBP28.51■■■□□ 2.15
DDX55-204ENST00000536079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.51■■■□□ 2.15
DDX55-204ENST00000536079 KIF14Q15058 1648 aa28.47■■■□□ 2.15
DDX55-204ENST00000536079 TTC37Q6PGP7 1564 aa28.47■■■□□ 2.15
DDX55-204ENST00000536079 COL17A1Q9UMD9 1497 aaPredicted RBP28.46■■■□□ 2.15
DDX55-204ENST00000536079 TEX14Q8IWB6 1497 aa28.45■■■□□ 2.14
DDX55-204ENST00000536079 KDM6BO15054 1643 aa28.39■■■□□ 2.13
DDX55-204ENST00000536079 PLCH2O75038 1416 aa28.34■■■□□ 2.13
DDX55-204ENST00000536079 MTUS2Q5JR59 1369 aa28.32■■■□□ 2.12
DDX55-204ENST00000536079 TIAM1Q13009 1591 aa28.31■■■□□ 2.12
DDX55-204ENST00000536079 FANCAO15360 1455 aa28.28■■■□□ 2.12
DDX55-204ENST00000536079 NEO1Q92859 1461 aa28.28■■■□□ 2.12
DDX55-204ENST00000536079 KANK4Q5T7N3 995 aaPredicted RBP28.28■■■□□ 2.12
DDX55-204ENST00000536079 AKNAQ7Z591 1439 aa28.26■■■□□ 2.11
DDX55-204ENST00000536079 ARAP3Q8WWN8 1544 aa28.25■■■□□ 2.11
DDX55-204ENST00000536079 EHBP1L1Q8N3D4 1523 aa28.24■■■□□ 2.11
DDX55-204ENST00000536079 MYO5CQ9NQX4 1742 aa28.23■■■□□ 2.11
DDX55-204ENST00000536079 RAPGEF3O95398 923 aa28.22■■■□□ 2.11
DDX55-204ENST00000536079 MAP3K1Q13233 1512 aa28.22■■■□□ 2.11
DDX55-204ENST00000536079 PHLDB1Q86UU1 1377 aa28.22■■■□□ 2.11
DDX55-204ENST00000536079 LRRC9Q6ZRR7 1453 aa28.21■■■□□ 2.11
DDX55-204ENST00000536079 GPATCH8Q9UKJ3 1502 aaKnown RBP28.2■■■□□ 2.1
DDX55-204ENST00000536079 EFCAB2Q5VUJ9 269 aa28.19■■■□□ 2.1
DDX55-204ENST00000536079 ARHGAP5Q13017 1502 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms