RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 CHIC1Q5VXU3 224 aa37.3■■■■□ 3.56
VPS37C-202ENST00000535818 KIAA0586Q9BVV6 1533 aa37.27■■■■□ 3.56
VPS37C-202ENST00000535818 ERCC6L2Q5T890 1561 aa37.25■■■■□ 3.55
VPS37C-202ENST00000535818 JPH4Q96JJ6 628 aa37.25■■■■□ 3.55
VPS37C-202ENST00000535818 PRG4Q92954 1404 aaPredicted RBP37.2■■■■□ 3.55
VPS37C-202ENST00000535818 EEA1Q15075 1411 aa37.18■■■■□ 3.54
VPS37C-202ENST00000535818 PRXQ9BXM0 1461 aa37.13■■■■□ 3.53
VPS37C-202ENST00000535818 CSRNP3Q8WYN3 585 aa37.12■■■■□ 3.53
VPS37C-202ENST00000535818 IQGAP2Q13576 1575 aa37.1■■■■□ 3.53
VPS37C-202ENST00000535818 FAM9AQ8IZU1 332 aaPredicted RBP37.05■■■■□ 3.52
VPS37C-202ENST00000535818 CTTNBP2Q8WZ74 1663 aa36.99■■■■□ 3.51
VPS37C-202ENST00000535818 CARMIL2Q6F5E8 1435 aa36.93■■■■□ 3.5
VPS37C-202ENST00000535818 UGGT2Q9NYU1 1516 aa36.86■■■■□ 3.49
VPS37C-202ENST00000535818 DISP1Q96F81 1524 aa36.8■■■■□ 3.48
VPS37C-202ENST00000535818 KIF21BO75037 1637 aa36.79■■■■□ 3.48
VPS37C-202ENST00000535818 TNIKQ9UKE5 1360 aa36.78■■■■□ 3.48
VPS37C-202ENST00000535818 TTBK1Q5TCY1 1321 aaPredicted RBP36.77■■■■□ 3.48
VPS37C-202ENST00000535818 PTPRGP23470 1445 aa36.76■■■■□ 3.47
VPS37C-202ENST00000535818 KIAA0556O60303 1618 aa36.74■■■■□ 3.47
VPS37C-202ENST00000535818 GOLGA3Q08378 1498 aa36.7■■■■□ 3.47
VPS37C-202ENST00000535818 TRHP20396 242 aaPredicted RBP36.67■■■■□ 3.46
VPS37C-202ENST00000535818 ADCY10Q96PN6 1610 aa36.64■■■■□ 3.46
VPS37C-202ENST00000535818 EHMT2Q96KQ7 1210 aa36.61■■■■□ 3.45
VPS37C-202ENST00000535818 NPM1P06748 294 aaKnown RBP eCLIP36.59■■■■□ 3.45
VPS37C-202ENST00000535818 UBTFP17480 764 aaKnown RBP36.52■■■■□ 3.44
VPS37C-202ENST00000535818 UACAQ9BZF9 1416 aa36.51■■■■□ 3.44
VPS37C-202ENST00000535818 RANGAP1P46060 587 aaPredicted RBP36.5■■■■□ 3.43
VPS37C-202ENST00000535818 SAMD9Q5K651 1589 aa36.47■■■■□ 3.43
VPS37C-202ENST00000535818 P3H3Q8IVL6 736 aa36.46■■■■□ 3.43
VPS37C-202ENST00000535818 ABCC2Q92887 1545 aa36.45■■■■□ 3.43
VPS37C-202ENST00000535818 UHRF1BP1LA0JNW5 1464 aa36.45■■■■□ 3.43
VPS37C-202ENST00000535818 MAPKBP1O60336 1514 aa36.4■■■■□ 3.42
VPS37C-202ENST00000535818 PLB1Q6P1J6 1458 aa36.37■■■■□ 3.41
VPS37C-202ENST00000535818 EFCAB5A4FU69 1503 aa36.34■■■■□ 3.41
VPS37C-202ENST00000535818 ABCA8O94911 1581 aa36.32■■■■□ 3.4
VPS37C-202ENST00000535818 KDM5BQ9UGL1 1544 aa36.29■■■■□ 3.4
VPS37C-202ENST00000535818 FHOD3Q2V2M9 1422 aa36.28■■■■□ 3.4
VPS37C-202ENST00000535818 ZCCHC11Q5TAX3 1644 aaKnown RBP36.25■■■■□ 3.39
VPS37C-202ENST00000535818 KIF13AQ9H1H9 1805 aa36.24■■■■□ 3.39
VPS37C-202ENST00000535818 ABCC10Q5T3U5 1492 aa36.24■■■■□ 3.39
VPS37C-202ENST00000535818 DIP2BQ9P265 1576 aa36.2■■■■□ 3.39
VPS37C-202ENST00000535818 ASXL2Q76L83 1435 aa36.2■■■■□ 3.39
VPS37C-202ENST00000535818 FAM69CQ0P6D2 419 aa36.19■■■■□ 3.38
VPS37C-202ENST00000535818 RAPGEF6Q8TEU7 1601 aa36.16■■■■□ 3.38
VPS37C-202ENST00000535818 ARHGAP35Q9NRY4 1499 aa36.11■■■■□ 3.37
VPS37C-202ENST00000535818 ARID3CA6NKF2 412 aa36.08■■■■□ 3.37
VPS37C-202ENST00000535818 WDR7Q9Y4E6 1490 aa36.03■■■■□ 3.36
VPS37C-202ENST00000535818 ATP10BO94823 1461 aa36■■■■□ 3.35
VPS37C-202ENST00000535818 FMN1Q68DA7 1419 aa36■■■■□ 3.35
VPS37C-202ENST00000535818 NUP153P49790 1475 aaKnown RBP35.99■■■■□ 3.35
VPS37C-202ENST00000535818 EPRSP07814 1512 aaKnown RBP35.98■■■■□ 3.35
VPS37C-202ENST00000535818 GLI2P10070 1586 aa35.98■■■■□ 3.35
VPS37C-202ENST00000535818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.96■■■■□ 3.35
VPS37C-202ENST00000535818 HNRNPUL2Q1KMD3 747 aaKnown RBP35.96■■■■□ 3.35
VPS37C-202ENST00000535818 TSPOAP1O95153 1857 aa35.93■■■■□ 3.34
VPS37C-202ENST00000535818 CLIP1P30622 1438 aa35.92■■■■□ 3.34
VPS37C-202ENST00000535818 KCNH8Q96L42 1107 aa35.88■■■■□ 3.33
VPS37C-202ENST00000535818 ATP1B4Q9UN42 357 aaPredicted RBP35.86■■■■□ 3.33
VPS37C-202ENST00000535818 HECW1Q76N89 1606 aa35.86■■■■□ 3.33
VPS37C-202ENST00000535818 MAP3K4Q9Y6R4 1608 aa35.83■■■■□ 3.33
VPS37C-202ENST00000535818 LOC105371045A0A1W2PR82 267 aa35.79■■■■□ 3.32
VPS37C-202ENST00000535818 CDK13Q14004 1512 aaKnown RBP35.77■■■■□ 3.32
VPS37C-202ENST00000535818 CEP162Q5TB80 1403 aa35.76■■■■□ 3.32
VPS37C-202ENST00000535818 PPRC1Q5VV67 1664 aaKnown RBP35.75■■■■□ 3.31
VPS37C-202ENST00000535818 CFAP43Q8NDM7 1665 aa35.75■■■■□ 3.31
VPS37C-202ENST00000535818 PLEKHD1A6NEE1 506 aa35.74■■■■□ 3.31
VPS37C-202ENST00000535818 PCF11O94913 1555 aaKnown RBP35.72■■■■□ 3.31
VPS37C-202ENST00000535818 CD109Q6YHK3 1445 aa35.7■■■■□ 3.31
VPS37C-202ENST00000535818 TEX14Q8IWB6 1497 aa35.7■■■■□ 3.31
VPS37C-202ENST00000535818 CASKIN1Q8WXD9 1431 aa35.68■■■■□ 3.3
VPS37C-202ENST00000535818 KDM6BO15054 1643 aa35.67■■■■□ 3.3
VPS37C-202ENST00000535818 ABCA9Q8IUA7 1624 aa35.64■■■■□ 3.3
VPS37C-202ENST00000535818 FYCO1Q9BQS8 1478 aa35.62■■■■□ 3.29
VPS37C-202ENST00000535818 LRRIQ1Q96JM4 1722 aa35.61■■■■□ 3.29
VPS37C-202ENST00000535818 MAGI3Q5TCQ9 1506 aa35.61■■■■□ 3.29
VPS37C-202ENST00000535818 CDK11AQ9UQ88 783 aaPredicted RBP35.6■■■■□ 3.29
VPS37C-202ENST00000535818 CCDC18Q5T9S5 1454 aa35.59■■■■□ 3.29
VPS37C-202ENST00000535818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.48■■■■□ 3.272e-7■■■□□ 19.1
VPS37C-202ENST00000535818 TROQ12816 1431 aaPredicted RBP35.47■■■■□ 3.27
VPS37C-202ENST00000535818 TTC37Q6PGP7 1564 aa35.45■■■■□ 3.27
VPS37C-202ENST00000535818 KIF14Q15058 1648 aa35.43■■■■□ 3.26
VPS37C-202ENST00000535818 COL17A1Q9UMD9 1497 aaPredicted RBP35.4■■■■□ 3.26
VPS37C-202ENST00000535818 NEO1Q92859 1461 aa35.35■■■■□ 3.25
VPS37C-202ENST00000535818 PHLDB1Q86UU1 1377 aa35.34■■■■□ 3.25
VPS37C-202ENST00000535818 VPS8Q8N3P4 1428 aa35.32■■■■□ 3.25
VPS37C-202ENST00000535818 CFAP74Q9C0B2 1584 aa35.31■■■■□ 3.24
VPS37C-202ENST00000535818 MYO5CQ9NQX4 1742 aa35.3■■■■□ 3.24
VPS37C-202ENST00000535818 FANCAO15360 1455 aa35.29■■■■□ 3.24
VPS37C-202ENST00000535818 ARAP3Q8WWN8 1544 aa35.29■■■■□ 3.24
VPS37C-202ENST00000535818 PLCH2O75038 1416 aa35.26■■■■□ 3.24
VPS37C-202ENST00000535818 MTUS2Q5JR59 1369 aa35.24■■■■□ 3.23
VPS37C-202ENST00000535818 AKNAQ7Z591 1439 aa35.22■■■■□ 3.23
VPS37C-202ENST00000535818 ARHGAP5Q13017 1502 aa35.17■■■■□ 3.22
VPS37C-202ENST00000535818 EHBP1L1Q8N3D4 1523 aa35.16■■■■□ 3.22
VPS37C-202ENST00000535818 EFCAB2Q5VUJ9 269 aa35.15■■■■□ 3.22
VPS37C-202ENST00000535818 RAPGEF3O95398 923 aa35.13■■■■□ 3.21
VPS37C-202ENST00000535818 DENND4BO75064 1496 aaPredicted RBP35.13■■■■□ 3.21
VPS37C-202ENST00000535818 PREX2Q70Z35 1606 aa35.13■■■■□ 3.21
VPS37C-202ENST00000535818 TIAM1Q13009 1591 aa35.13■■■■□ 3.21
VPS37C-202ENST00000535818 ADGRL1O94910 1474 aa35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms