RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 GRIN2AQ12879 1464 aa15.84■□□□□ 0.13
UBB-204ENST00000535788 CEP170Q5SW79 1584 aa15.84■□□□□ 0.13
UBB-204ENST00000535788 FHAD1B1AJZ9 1412 aa15.84■□□□□ 0.13
UBB-204ENST00000535788 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
UBB-204ENST00000535788 TTBK1Q5TCY1 1321 aaPredicted RBP15.8■□□□□ 0.12
UBB-204ENST00000535788 MYT1Q01538 1121 aa15.8■□□□□ 0.12
UBB-204ENST00000535788 KIF27Q86VH2 1401 aa15.78■□□□□ 0.12
UBB-204ENST00000535788 NUP160Q12769 1436 aa15.77■□□□□ 0.12
UBB-204ENST00000535788 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.11
UBB-204ENST00000535788 KDM6BO15054 1643 aa15.74■□□□□ 0.11
UBB-204ENST00000535788 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
UBB-204ENST00000535788 JPH4Q96JJ6 628 aa15.72■□□□□ 0.11
UBB-204ENST00000535788 CUL7Q14999 1698 aa15.72■□□□□ 0.11
UBB-204ENST00000535788 TSPOAP1O95153 1857 aa15.71■□□□□ 0.11
UBB-204ENST00000535788 IGF1RP08069 1367 aa15.71■□□□□ 0.11
UBB-204ENST00000535788 SHROOM2Q13796 1616 aa15.71■□□□□ 0.11
UBB-204ENST00000535788 DIP2BQ9P265 1576 aa15.67■□□□□ 0.1
UBB-204ENST00000535788 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
UBB-204ENST00000535788 RUSC2Q8N2Y8 1516 aa15.67■□□□□ 0.1
UBB-204ENST00000535788 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
UBB-204ENST00000535788 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
UBB-204ENST00000535788 ADGRL1O94910 1474 aa15.62■□□□□ 0.09
UBB-204ENST00000535788 HECW2Q9P2P5 1572 aa15.59■□□□□ 0.09
UBB-204ENST00000535788 ADCY10Q96PN6 1610 aa15.58■□□□□ 0.09
UBB-204ENST00000535788 KIAA0586Q9BVV6 1533 aa15.58■□□□□ 0.08
UBB-204ENST00000535788 FBXO41Q8TF61 875 aa15.54■□□□□ 0.08
UBB-204ENST00000535788 RAPGEF2Q9Y4G8 1499 aa15.53■□□□□ 0.08
UBB-204ENST00000535788 AMER1Q5JTC6 1135 aaPredicted RBP15.53■□□□□ 0.08
UBB-204ENST00000535788 RTN4Q9NQC3 1192 aaKnown RBP15.53■□□□□ 0.08
UBB-204ENST00000535788 PELP1Q8IZL8 1130 aaKnown RBP15.51■□□□□ 0.07
UBB-204ENST00000535788 IQGAP2Q13576 1575 aa15.49■□□□□ 0.07
UBB-204ENST00000535788 PRXQ9BXM0 1461 aa15.45■□□□□ 0.06
UBB-204ENST00000535788 COL17A1Q9UMD9 1497 aaPredicted RBP15.44■□□□□ 0.06
UBB-204ENST00000535788 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
UBB-204ENST00000535788 CTTNBP2Q8WZ74 1663 aa15.42■□□□□ 0.06
UBB-204ENST00000535788 PTPRGP23470 1445 aa15.42■□□□□ 0.06
UBB-204ENST00000535788 CARMIL2Q6F5E8 1435 aa15.42■□□□□ 0.06
UBB-204ENST00000535788 ASXL2Q76L83 1435 aa15.42■□□□□ 0.06
UBB-204ENST00000535788 UGGT2Q9NYU1 1516 aa15.4■□□□□ 0.06
UBB-204ENST00000535788 PPRC1Q5VV67 1664 aaKnown RBP15.4■□□□□ 0.06
UBB-204ENST00000535788 DISP1Q96F81 1524 aa15.39■□□□□ 0.05
UBB-204ENST00000535788 EEA1Q15075 1411 aa15.39■□□□□ 0.05
UBB-204ENST00000535788 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
UBB-204ENST00000535788 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
UBB-204ENST00000535788 PLB1Q6P1J6 1458 aa15.37■□□□□ 0.05
UBB-204ENST00000535788 KIAA0556O60303 1618 aa15.36■□□□□ 0.05
UBB-204ENST00000535788 ABCC2Q92887 1545 aa15.35■□□□□ 0.05
UBB-204ENST00000535788 GLI2P10070 1586 aa15.34■□□□□ 0.05
UBB-204ENST00000535788 LMTK3Q96Q04 1460 aa15.33■□□□□ 0.05
UBB-204ENST00000535788 FAM9AQ8IZU1 332 aaPredicted RBP15.32■□□□□ 0.04
UBB-204ENST00000535788 GOLGA3Q08378 1498 aa15.3■□□□□ 0.04
UBB-204ENST00000535788 TEX14Q8IWB6 1497 aa15.29■□□□□ 0.04
UBB-204ENST00000535788 ERICH6Q7L0X2 663 aa15.29■□□□□ 0.04
UBB-204ENST00000535788 EPRSP07814 1512 aaKnown RBP15.28■□□□□ 0.04
UBB-204ENST00000535788 UHRF1BP1LA0JNW5 1464 aa15.27■□□□□ 0.04
UBB-204ENST00000535788 UACAQ9BZF9 1416 aa15.27■□□□□ 0.04
UBB-204ENST00000535788 KIF21BO75037 1637 aa15.27■□□□□ 0.03
UBB-204ENST00000535788 MAP3K4Q9Y6R4 1608 aa15.25■□□□□ 0.03
UBB-204ENST00000535788 ILDR2Q71H61 639 aa15.23■□□□□ 0.03
UBB-204ENST00000535788 SAMD9Q5K651 1589 aa15.21■□□□□ 0.03
UBB-204ENST00000535788 KCNH8Q96L42 1107 aa15.21■□□□□ 0.03
UBB-204ENST00000535788 KDM5BQ9UGL1 1544 aa15.2■□□□□ 0.02
UBB-204ENST00000535788 ZCCHC11Q5TAX3 1644 aaKnown RBP15.19■□□□□ 0.02
UBB-204ENST00000535788 SOCS7O14512 581 aa15.19■□□□□ 0.02
UBB-204ENST00000535788 ABCA8O94911 1581 aa15.19■□□□□ 0.02
UBB-204ENST00000535788 P3H3Q8IVL6 736 aa15.18■□□□□ 0.02
UBB-204ENST00000535788 DISP3Q9P2K9 1392 aa15.18■□□□□ 0.02
UBB-204ENST00000535788 APLP2Q06481 763 aa15.17■□□□□ 0.02
UBB-204ENST00000535788 ARXQ96QS3 562 aa15.17■□□□□ 0.02
UBB-204ENST00000535788 CD109Q6YHK3 1445 aa15.16■□□□□ 0.02
UBB-204ENST00000535788 RANGAP1P46060 587 aaPredicted RBP15.15■□□□□ 0.02
UBB-204ENST00000535788 PTPRMP28827 1452 aa15.14■□□□□ 0.01
UBB-204ENST00000535788 WDR7Q9Y4E6 1490 aa15.12■□□□□ 0.01
UBB-204ENST00000535788 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
UBB-204ENST00000535788 FHOD3Q2V2M9 1422 aa15.11■□□□□ 0.01
UBB-204ENST00000535788 UBTFP17480 764 aaKnown RBP15.11■□□□□ 0.01
UBB-204ENST00000535788 CERKQ8TCT0 537 aa15.11■□□□□ 0.01
UBB-204ENST00000535788 HSPA2P54652 639 aa15.1■□□□□ 0.01
UBB-204ENST00000535788 ARID4BQ4LE39 1312 aaPredicted RBP15.1■□□□□ 0.01
UBB-204ENST00000535788 RAPGEF6Q8TEU7 1601 aa15.09■□□□□ 0.01
UBB-204ENST00000535788 MAGI3Q5TCQ9 1506 aa15.08■□□□□ 0.01
UBB-204ENST00000535788 ARID3CA6NKF2 412 aa15.07■□□□□ 0
UBB-204ENST00000535788 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
UBB-204ENST00000535788 ADAMTSL3P82987 1691 aa15.04■□□□□ -0
UBB-204ENST00000535788 ATP10BO94823 1461 aa15.04■□□□□ -0
UBB-204ENST00000535788 RAPGEF3O95398 923 aa15.04■□□□□ -0
UBB-204ENST00000535788 NUP153P49790 1475 aaKnown RBP15.03■□□□□ -0
UBB-204ENST00000535788 CFAP43Q8NDM7 1665 aa15.03■□□□□ -0
UBB-204ENST00000535788 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
UBB-204ENST00000535788 ARAP3Q8WWN8 1544 aa14.98□□□□□ -0.01
UBB-204ENST00000535788 MADDQ8WXG6 1647 aa14.98□□□□□ -0.01
UBB-204ENST00000535788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
UBB-204ENST00000535788 HNRNPUL2Q1KMD3 747 aaKnown RBP14.97□□□□□ -0.01
UBB-204ENST00000535788 BCORL1Q5H9F3 1711 aa14.95□□□□□ -0.02
UBB-204ENST00000535788 FMN1Q68DA7 1419 aa14.95□□□□□ -0.02
UBB-204ENST00000535788 KCNA4P22459 653 aa14.94□□□□□ -0.02
UBB-204ENST00000535788 HECW1Q76N89 1606 aa14.93□□□□□ -0.02
UBB-204ENST00000535788 RIMS1Q86UR5 1692 aaKnown RBP14.93□□□□□ -0.02
UBB-204ENST00000535788 CDK13Q14004 1512 aaKnown RBP14.92□□□□□ -0.02
UBB-204ENST00000535788 ABCA9Q8IUA7 1624 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms