RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 ZEB1P37275 1124 aaPredicted RBP13.94□□□□□ -0.18
LINC00943-203ENST00000535544 ITGAEP38570 1179 aa13.93□□□□□ -0.18
LINC00943-203ENST00000535544 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
LINC00943-203ENST00000535544 CUL7Q14999 1698 aa13.89□□□□□ -0.19
LINC00943-203ENST00000535544 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
LINC00943-203ENST00000535544 ARID3CA6NKF2 412 aa13.85□□□□□ -0.19
LINC00943-203ENST00000535544 CTTNBP2Q8WZ74 1663 aa13.85□□□□□ -0.19
LINC00943-203ENST00000535544 PCF11O94913 1555 aaKnown RBP13.84□□□□□ -0.19
LINC00943-203ENST00000535544 PBRM1Q86U86 1689 aa13.83□□□□□ -0.2
LINC00943-203ENST00000535544 PHLDB1Q86UU1 1377 aa13.81□□□□□ -0.2
LINC00943-203ENST00000535544 WDR62O43379 1518 aa13.81□□□□□ -0.2
LINC00943-203ENST00000535544 TIAM1Q13009 1591 aa13.81□□□□□ -0.2
LINC00943-203ENST00000535544 FBLN2P98095 1184 aa13.81□□□□□ -0.2
LINC00943-203ENST00000535544 LRRC9Q6ZRR7 1453 aa13.79□□□□□ -0.2
LINC00943-203ENST00000535544 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
LINC00943-203ENST00000535544 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
LINC00943-203ENST00000535544 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.2
LINC00943-203ENST00000535544 IFT140Q96RY7 1462 aa13.77□□□□□ -0.2
LINC00943-203ENST00000535544 RRBP1Q9P2E9 1410 aaKnown RBP13.77□□□□□ -0.21
LINC00943-203ENST00000535544 THOC2Q8NI27 1593 aaKnown RBP13.77□□□□□ -0.21
LINC00943-203ENST00000535544 FAM50AQ14320 339 aaKnown RBP13.77□□□□□ -0.21
LINC00943-203ENST00000535544 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
LINC00943-203ENST00000535544 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
LINC00943-203ENST00000535544 LRRIQ1Q96JM4 1722 aa13.75□□□□□ -0.21
LINC00943-203ENST00000535544 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
LINC00943-203ENST00000535544 EIF4G3O43432 1585 aaKnown RBP13.74□□□□□ -0.21
LINC00943-203ENST00000535544 EFCAB5A4FU69 1503 aa13.73□□□□□ -0.21
LINC00943-203ENST00000535544 SAMD9Q5K651 1589 aa13.73□□□□□ -0.21
LINC00943-203ENST00000535544 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.22
LINC00943-203ENST00000535544 FMN1Q68DA7 1419 aa13.7□□□□□ -0.22
LINC00943-203ENST00000535544 FYCO1Q9BQS8 1478 aa13.7□□□□□ -0.22
LINC00943-203ENST00000535544 CFAP43Q8NDM7 1665 aa13.68□□□□□ -0.22
LINC00943-203ENST00000535544 MAP3K1Q13233 1512 aa13.68□□□□□ -0.22
LINC00943-203ENST00000535544 DHX57Q6P158 1386 aaKnown RBP13.68□□□□□ -0.22
LINC00943-203ENST00000535544 IQGAP2Q13576 1575 aa13.68□□□□□ -0.22
LINC00943-203ENST00000535544 MTUS2Q5JR59 1369 aa13.66□□□□□ -0.22
LINC00943-203ENST00000535544 MAGI3Q5TCQ9 1506 aa13.66□□□□□ -0.22
LINC00943-203ENST00000535544 GRIN2AQ12879 1464 aa13.65□□□□□ -0.22
LINC00943-203ENST00000535544 RAB3GAP2Q9H2M9 1393 aa13.63□□□□□ -0.23
LINC00943-203ENST00000535544 CDK13Q14004 1512 aaKnown RBP13.63□□□□□ -0.23
LINC00943-203ENST00000535544 DISP1Q96F81 1524 aa13.63□□□□□ -0.23
LINC00943-203ENST00000535544 CEP170Q5SW79 1584 aa13.61□□□□□ -0.23
LINC00943-203ENST00000535544 KIAA0586Q9BVV6 1533 aa13.6□□□□□ -0.23
LINC00943-203ENST00000535544 PTPRKQ15262 1439 aa13.6□□□□□ -0.23
LINC00943-203ENST00000535544 JPH4Q96JJ6 628 aa13.59□□□□□ -0.23
LINC00943-203ENST00000535544 NCOA2Q15596 1464 aa13.58□□□□□ -0.23
LINC00943-203ENST00000535544 SYNJ2O15056 1496 aa13.58□□□□□ -0.24
LINC00943-203ENST00000535544 UGGT2Q9NYU1 1516 aa13.57□□□□□ -0.24
LINC00943-203ENST00000535544 CHIC2Q9UKJ5 165 aa13.57□□□□□ -0.24
LINC00943-203ENST00000535544 EPRSP07814 1512 aaKnown RBP13.57□□□□□ -0.24
LINC00943-203ENST00000535544 FGD6Q6ZV73 1430 aa13.57□□□□□ -0.24
LINC00943-203ENST00000535544 SIN3AQ96ST3 1273 aa13.56□□□□□ -0.24
LINC00943-203ENST00000535544 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
LINC00943-203ENST00000535544 DIEXFQ68CQ4 756 aaKnown RBP13.55□□□□□ -0.24
LINC00943-203ENST00000535544 KIAA0556O60303 1618 aa13.55□□□□□ -0.24
LINC00943-203ENST00000535544 SETD5Q9C0A6 1442 aa13.55□□□□□ -0.24
LINC00943-203ENST00000535544 PLB1Q6P1J6 1458 aa13.54□□□□□ -0.24
LINC00943-203ENST00000535544 ZNF316A6NFI3 1004 aaPredicted RBP13.53□□□□□ -0.24
LINC00943-203ENST00000535544 ZNF644Q9H582 1327 aaPredicted RBP13.53□□□□□ -0.24
LINC00943-203ENST00000535544 NEUROD1Q13562 356 aa13.52□□□□□ -0.25
LINC00943-203ENST00000535544 RRP7BPQ9NSQ0 103 aa13.52□□□□□ -0.25
LINC00943-203ENST00000535544 NUP153P49790 1475 aaKnown RBP13.51□□□□□ -0.25
LINC00943-203ENST00000535544 MYOM3Q5VTT5 1437 aa13.51□□□□□ -0.25
LINC00943-203ENST00000535544 MAPKBP1O60336 1514 aa13.5□□□□□ -0.25
LINC00943-203ENST00000535544 NUP160Q12769 1436 aa13.5□□□□□ -0.25
LINC00943-203ENST00000535544 HECW1Q76N89 1606 aa13.49□□□□□ -0.25
LINC00943-203ENST00000535544 SUPT6HQ7KZ85 1726 aaKnown RBP13.49□□□□□ -0.25
LINC00943-203ENST00000535544 PRG4Q92954 1404 aaPredicted RBP13.48□□□□□ -0.25
LINC00943-203ENST00000535544 EHBP1L1Q8N3D4 1523 aa13.47□□□□□ -0.25
LINC00943-203ENST00000535544 ARHGEF11O15085 1522 aa13.46□□□□□ -0.25
LINC00943-203ENST00000535544 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
LINC00943-203ENST00000535544 RAPGEF6Q8TEU7 1601 aa13.45□□□□□ -0.26
LINC00943-203ENST00000535544 PTPN23Q9H3S7 1636 aa13.45□□□□□ -0.26
LINC00943-203ENST00000535544 ZNF777Q9ULD5 760 aaPredicted RBP13.43□□□□□ -0.26
LINC00943-203ENST00000535544 CLSPNQ9HAW4 1339 aa13.42□□□□□ -0.26
LINC00943-203ENST00000535544 CHD1O14646 1710 aa13.42□□□□□ -0.26
LINC00943-203ENST00000535544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC00943-203ENST00000535544 NAIPQ13075 1403 aa13.41□□□□□ -0.26
LINC00943-203ENST00000535544 ERCC6L2Q5T890 1561 aa13.41□□□□□ -0.26
LINC00943-203ENST00000535544 KDM6BO15054 1643 aa13.4□□□□□ -0.26
LINC00943-203ENST00000535544 CARMIL2Q6F5E8 1435 aa13.4□□□□□ -0.26
LINC00943-203ENST00000535544 FOXD1Q16676 465 aa13.4□□□□□ -0.27
LINC00943-203ENST00000535544 MIER1Q8N108 512 aa13.4□□□□□ -0.27
LINC00943-203ENST00000535544 HIRIP3Q9BW71 556 aaPredicted RBP13.4□□□□□ -0.27
LINC00943-203ENST00000535544 KIF14Q15058 1648 aa13.38□□□□□ -0.27
LINC00943-203ENST00000535544 HFM1A2PYH4 1435 aa13.38□□□□□ -0.27
LINC00943-203ENST00000535544 ATP10BO94823 1461 aa13.36□□□□□ -0.27
LINC00943-203ENST00000535544 TRIM52Q96A61 297 aa13.36□□□□□ -0.27
LINC00943-203ENST00000535544 CDK11AQ9UQ88 783 aaPredicted RBP13.35□□□□□ -0.27
LINC00943-203ENST00000535544 PTPRGP23470 1445 aa13.35□□□□□ -0.27
LINC00943-203ENST00000535544 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
LINC00943-203ENST00000535544 TCOF1Q13428 1488 aaKnown RBP13.35□□□□□ -0.27
LINC00943-203ENST00000535544 TROQ12816 1431 aaPredicted RBP13.34□□□□□ -0.27
LINC00943-203ENST00000535544 PLEKHD1A6NEE1 506 aa13.33□□□□□ -0.28
LINC00943-203ENST00000535544 ABCC5O15440 1437 aa13.33□□□□□ -0.28
LINC00943-203ENST00000535544 ABCA8O94911 1581 aa13.32□□□□□ -0.28
LINC00943-203ENST00000535544 GPATCH8Q9UKJ3 1502 aaKnown RBP13.32□□□□□ -0.28
LINC00943-203ENST00000535544 DENND4BO75064 1496 aaPredicted RBP13.32□□□□□ -0.28
LINC00943-203ENST00000535544 MIA2Q96PC5 1412 aa13.31□□□□□ -0.28
LINC00943-203ENST00000535544 YTHDC1Q96MU7 727 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms