RNA–Protein interactions for RNA: ENST00000535419.2

PGRMC1-202, Transcript of progesterone receptor membrane component 1, humanhuman

TSL 2 BASIC

Gene PGRMC1, Length 1,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGRMC1-202ENST00000535419 ARAP1Q96P48 1450 aa27.66■■■□□ 2.02
PGRMC1-202ENST00000535419 SYNJ2O15056 1496 aa27.57■■■□□ 2
PGRMC1-202ENST00000535419 GRIN2AQ12879 1464 aa27.57■■■□□ 2
PGRMC1-202ENST00000535419 EFCAB5A4FU69 1503 aa27.55■■■□□ 2
PGRMC1-202ENST00000535419 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
PGRMC1-202ENST00000535419 IQGAP2Q13576 1575 aa27.5■■□□□ 1.99
PGRMC1-202ENST00000535419 PPARGC1BQ86YN6 1023 aaKnown RBP27.48■■□□□ 1.99
PGRMC1-202ENST00000535419 TRIM26Q12899 539 aaPredicted RBP27.45■■□□□ 1.99
PGRMC1-202ENST00000535419 SAMD9Q5K651 1589 aa27.45■■□□□ 1.99
PGRMC1-202ENST00000535419 FBLN2P98095 1184 aa27.44■■□□□ 1.98
PGRMC1-202ENST00000535419 KIAA0586Q9BVV6 1533 aa27.43■■□□□ 1.98
PGRMC1-202ENST00000535419 P3H3Q8IVL6 736 aa27.43■■□□□ 1.98
PGRMC1-202ENST00000535419 PCGF6Q9BYE7 350 aa27.43■■□□□ 1.98
PGRMC1-202ENST00000535419 FHOD3Q2V2M9 1422 aa27.41■■□□□ 1.98
PGRMC1-202ENST00000535419 APLP2Q06481 763 aa27.4■■□□□ 1.98
PGRMC1-202ENST00000535419 CEP170Q5SW79 1584 aa27.4■■□□□ 1.98
PGRMC1-202ENST00000535419 NUP160Q12769 1436 aa27.36■■□□□ 1.97
PGRMC1-202ENST00000535419 UGGT2Q9NYU1 1516 aa27.35■■□□□ 1.97
PGRMC1-202ENST00000535419 CHD1O14646 1710 aa27.33■■□□□ 1.97
PGRMC1-202ENST00000535419 TTBK1Q5TCY1 1321 aaPredicted RBP27.3■■□□□ 1.96
PGRMC1-202ENST00000535419 FMN1Q68DA7 1419 aa27.3■■□□□ 1.96
PGRMC1-202ENST00000535419 PCF11O94913 1555 aaKnown RBP27.3■■□□□ 1.96
PGRMC1-202ENST00000535419 FYCO1Q9BQS8 1478 aa27.23■■□□□ 1.95
PGRMC1-202ENST00000535419 CASKIN1Q8WXD9 1431 aa27.22■■□□□ 1.95
PGRMC1-202ENST00000535419 KIAA0556O60303 1618 aa27.22■■□□□ 1.95
PGRMC1-202ENST00000535419 DISP1Q96F81 1524 aa27.21■■□□□ 1.95
PGRMC1-202ENST00000535419 MAP3K1Q13233 1512 aa27.19■■□□□ 1.94
PGRMC1-202ENST00000535419 TIAM1Q13009 1591 aa27.18■■□□□ 1.94
PGRMC1-202ENST00000535419 CFAP43Q8NDM7 1665 aa27.15■■□□□ 1.94
PGRMC1-202ENST00000535419 JPH4Q96JJ6 628 aa27.14■■□□□ 1.93
PGRMC1-202ENST00000535419 ATP1B4Q9UN42 357 aaPredicted RBP27.14■■□□□ 1.93
PGRMC1-202ENST00000535419 KANK4Q5T7N3 995 aaPredicted RBP27.12■■□□□ 1.93
PGRMC1-202ENST00000535419 CARMIL2Q6F5E8 1435 aa27.1■■□□□ 1.93
PGRMC1-202ENST00000535419 HECW1Q76N89 1606 aa27.04■■□□□ 1.92
PGRMC1-202ENST00000535419 LRRIQ1Q96JM4 1722 aa27.04■■□□□ 1.92
PGRMC1-202ENST00000535419 LRRC9Q6ZRR7 1453 aa27.03■■□□□ 1.92
PGRMC1-202ENST00000535419 SHROOM2Q13796 1616 aa27.01■■□□□ 1.91
PGRMC1-202ENST00000535419 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
PGRMC1-202ENST00000535419 CLASP1Q7Z460 1538 aa26.98■■□□□ 1.91
PGRMC1-202ENST00000535419 CCDC18Q5T9S5 1454 aa26.97■■□□□ 1.91
PGRMC1-202ENST00000535419 RAPGEF6Q8TEU7 1601 aa26.96■■□□□ 1.91
PGRMC1-202ENST00000535419 EPRSP07814 1512 aaKnown RBP26.92■■□□□ 1.9
PGRMC1-202ENST00000535419 MTUS2Q5JR59 1369 aa26.87■■□□□ 1.89
PGRMC1-202ENST00000535419 NUP153P49790 1475 aaKnown RBP26.87■■□□□ 1.89
PGRMC1-202ENST00000535419 PLB1Q6P1J6 1458 aa26.86■■□□□ 1.89
PGRMC1-202ENST00000535419 CDK13Q14004 1512 aaKnown RBP26.85■■□□□ 1.89
PGRMC1-202ENST00000535419 EHBP1L1Q8N3D4 1523 aa26.84■■□□□ 1.89
PGRMC1-202ENST00000535419 RRBP1Q9P2E9 1410 aaKnown RBP26.82■■□□□ 1.88
PGRMC1-202ENST00000535419 ABCA8O94911 1581 aa26.82■■□□□ 1.88
PGRMC1-202ENST00000535419 PTPRGP23470 1445 aa26.81■■□□□ 1.88
PGRMC1-202ENST00000535419 ERCC6L2Q5T890 1561 aa26.81■■□□□ 1.88
PGRMC1-202ENST00000535419 ARID3CA6NKF2 412 aa26.79■■□□□ 1.88
PGRMC1-202ENST00000535419 MAGI3Q5TCQ9 1506 aa26.79■■□□□ 1.88
PGRMC1-202ENST00000535419 PHLDB1Q86UU1 1377 aa26.78■■□□□ 1.88
PGRMC1-202ENST00000535419 SUPT6HQ7KZ85 1726 aaKnown RBP26.77■■□□□ 1.88
PGRMC1-202ENST00000535419 CCNB3Q8WWL7 1395 aa26.75■■□□□ 1.87
PGRMC1-202ENST00000535419 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
PGRMC1-202ENST00000535419 NCOA2Q15596 1464 aa26.72■■□□□ 1.87
PGRMC1-202ENST00000535419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.71■■□□□ 1.87
PGRMC1-202ENST00000535419 HNRNPUL2Q1KMD3 747 aaKnown RBP26.71■■□□□ 1.87
PGRMC1-202ENST00000535419 CDK11AQ9UQ88 783 aaPredicted RBP26.68■■□□□ 1.86
PGRMC1-202ENST00000535419 UACAQ9BZF9 1416 aa26.67■■□□□ 1.86
PGRMC1-202ENST00000535419 ARHGEF11O15085 1522 aa26.66■■□□□ 1.86
PGRMC1-202ENST00000535419 ATP10BO94823 1461 aa26.62■■□□□ 1.85
PGRMC1-202ENST00000535419 MYOM3Q5VTT5 1437 aa26.61■■□□□ 1.85
PGRMC1-202ENST00000535419 FGD6Q6ZV73 1430 aa26.61■■□□□ 1.85
PGRMC1-202ENST00000535419 ABCC2Q92887 1545 aa26.6■■□□□ 1.85
PGRMC1-202ENST00000535419 TROQ12816 1431 aaPredicted RBP26.6■■□□□ 1.85
PGRMC1-202ENST00000535419 DNAJC5Q9H3Z4 198 aa26.6■■□□□ 1.85
PGRMC1-202ENST00000535419 HRCP23327 699 aa26.57■■□□□ 1.84
PGRMC1-202ENST00000535419 FAM50AQ14320 339 aaKnown RBP26.56■■□□□ 1.84
PGRMC1-202ENST00000535419 ADCY10Q96PN6 1610 aa26.55■■□□□ 1.84
PGRMC1-202ENST00000535419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.54■■□□□ 1.84
PGRMC1-202ENST00000535419 PLEKHD1A6NEE1 506 aa26.52■■□□□ 1.84
PGRMC1-202ENST00000535419 UHRF1BP1LA0JNW5 1464 aa26.52■■□□□ 1.84
PGRMC1-202ENST00000535419 ITGAEP38570 1179 aa26.5■■□□□ 1.83
PGRMC1-202ENST00000535419 PTPN23Q9H3S7 1636 aa26.49■■□□□ 1.83
PGRMC1-202ENST00000535419 KIF14Q15058 1648 aa26.49■■□□□ 1.83
PGRMC1-202ENST00000535419 MIA2Q96PC5 1412 aa26.46■■□□□ 1.83
PGRMC1-202ENST00000535419 ZCCHC11Q5TAX3 1644 aaKnown RBP26.43■■□□□ 1.82
PGRMC1-202ENST00000535419 TCOF1Q13428 1488 aaKnown RBP26.43■■□□□ 1.82
PGRMC1-202ENST00000535419 ITSN2Q9NZM3 1697 aa26.42■■□□□ 1.82
PGRMC1-202ENST00000535419 KDM5BQ9UGL1 1544 aa26.42■■□□□ 1.82
PGRMC1-202ENST00000535419 CCER1Q8TC90 406 aaPredicted RBP26.38■■□□□ 1.81
PGRMC1-202ENST00000535419 ABCC10Q5T3U5 1492 aa26.37■■□□□ 1.81
PGRMC1-202ENST00000535419 GPATCH8Q9UKJ3 1502 aaKnown RBP26.36■■□□□ 1.81
PGRMC1-202ENST00000535419 CDC42BPAQ5VT25 1732 aa26.33■■□□□ 1.81
PGRMC1-202ENST00000535419 ZEB1P37275 1124 aaPredicted RBP26.32■■□□□ 1.8
PGRMC1-202ENST00000535419 CFDP1Q9UEE9 299 aaPredicted RBP26.3■■□□□ 1.8
PGRMC1-202ENST00000535419 PTPRKQ15262 1439 aa26.27■■□□□ 1.8
PGRMC1-202ENST00000535419 SETD5Q9C0A6 1442 aa26.26■■□□□ 1.79
PGRMC1-202ENST00000535419 CAMSAP2Q08AD1 1489 aa26.25■■□□□ 1.79
PGRMC1-202ENST00000535419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.24■■□□□ 1.79
PGRMC1-202ENST00000535419 TTC37Q6PGP7 1564 aa26.24■■□□□ 1.79
PGRMC1-202ENST00000535419 ZNF644Q9H582 1327 aaPredicted RBP26.23■■□□□ 1.79
PGRMC1-202ENST00000535419 RAB3GAP2Q9H2M9 1393 aa26.23■■□□□ 1.79
PGRMC1-202ENST00000535419 DNMT1P26358 1616 aaKnown RBP26.22■■□□□ 1.79
PGRMC1-202ENST00000535419 PREX2Q70Z35 1606 aa26.22■■□□□ 1.79
PGRMC1-202ENST00000535419 KCNH8Q96L42 1107 aa26.2■■□□□ 1.78
PGRMC1-202ENST00000535419 CDC42BPBQ9Y5S2 1711 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms