RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 RAPGEF2Q9Y4G8 1499 aa21.76■■□□□ 1.07
CCS-209ENST00000534763 JPH4Q96JJ6 628 aa21.75■■□□□ 1.07
CCS-209ENST00000534763 EEA1Q15075 1411 aa21.73■■□□□ 1.07
CCS-209ENST00000534763 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
CCS-209ENST00000534763 PRXQ9BXM0 1461 aa21.7■■□□□ 1.06
CCS-209ENST00000534763 PRG4Q92954 1404 aaPredicted RBP21.69■■□□□ 1.06
CCS-209ENST00000534763 ERCC6L2Q5T890 1561 aa21.66■■□□□ 1.06
CCS-209ENST00000534763 CSRNP3Q8WYN3 585 aa21.65■■□□□ 1.06
CCS-209ENST00000534763 IQGAP2Q13576 1575 aa21.61■■□□□ 1.05
CCS-209ENST00000534763 CARMIL2Q6F5E8 1435 aa21.55■■□□□ 1.04
CCS-209ENST00000534763 UGGT2Q9NYU1 1516 aa21.53■■□□□ 1.04
CCS-209ENST00000534763 CTTNBP2Q8WZ74 1663 aa21.48■■□□□ 1.03
CCS-209ENST00000534763 TNIKQ9UKE5 1360 aa21.48■■□□□ 1.03
CCS-209ENST00000534763 DISP1Q96F81 1524 aa21.47■■□□□ 1.03
CCS-209ENST00000534763 PTPRGP23470 1445 aa21.45■■□□□ 1.02
CCS-209ENST00000534763 KIF21BO75037 1637 aa21.44■■□□□ 1.02
CCS-209ENST00000534763 FAM9AQ8IZU1 332 aaPredicted RBP21.43■■□□□ 1.02
CCS-209ENST00000534763 GOLGA3Q08378 1498 aa21.42■■□□□ 1.02
CCS-209ENST00000534763 KIAA0556O60303 1618 aa21.39■■□□□ 1.01
CCS-209ENST00000534763 ADCY10Q96PN6 1610 aa21.33■■□□□ 1.01
CCS-209ENST00000534763 UHRF1BP1LA0JNW5 1464 aa21.33■■□□□ 1.01
CCS-209ENST00000534763 NPM1P06748 294 aaKnown RBP eCLIP21.33■■□□□ 1.01
CCS-209ENST00000534763 UACAQ9BZF9 1416 aa21.31■■□□□ 1
CCS-209ENST00000534763 TRHP20396 242 aaPredicted RBP21.31■■□□□ 1
CCS-209ENST00000534763 MAPKBP1O60336 1514 aa21.28■■□□□ 1
CCS-209ENST00000534763 ABCC2Q92887 1545 aa21.27■■□□□ 1
CCS-209ENST00000534763 SAMD9Q5K651 1589 aa21.26■□□□□ 0.99
CCS-209ENST00000534763 TTBK1Q5TCY1 1321 aaPredicted RBP21.25■□□□□ 0.99
CCS-209ENST00000534763 UBTFP17480 764 aaKnown RBP21.21■□□□□ 0.99
CCS-209ENST00000534763 EFCAB5A4FU69 1503 aa21.2■□□□□ 0.98
CCS-209ENST00000534763 KDM5BQ9UGL1 1544 aa21.2■□□□□ 0.98
CCS-209ENST00000534763 ABCA8O94911 1581 aa21.19■□□□□ 0.98
CCS-209ENST00000534763 ABCC10Q5T3U5 1492 aa21.18■□□□□ 0.98
CCS-209ENST00000534763 PLB1Q6P1J6 1458 aa21.18■□□□□ 0.98
CCS-209ENST00000534763 P3H3Q8IVL6 736 aa21.14■□□□□ 0.97
CCS-209ENST00000534763 ASXL2Q76L83 1435 aa21.11■□□□□ 0.97
CCS-209ENST00000534763 DIP2BQ9P265 1576 aa21.09■□□□□ 0.97
CCS-209ENST00000534763 ZCCHC11Q5TAX3 1644 aaKnown RBP21.08■□□□□ 0.97
CCS-209ENST00000534763 RANGAP1P46060 587 aaPredicted RBP21.08■□□□□ 0.97
CCS-209ENST00000534763 FAM69CQ0P6D2 419 aa21.08■□□□□ 0.97
CCS-209ENST00000534763 FHOD3Q2V2M9 1422 aa21.08■□□□□ 0.97
CCS-209ENST00000534763 EHMT2Q96KQ7 1210 aa21.08■□□□□ 0.97
CCS-209ENST00000534763 KIF13AQ9H1H9 1805 aa21.07■□□□□ 0.96
CCS-209ENST00000534763 ARHGAP35Q9NRY4 1499 aa21.04■□□□□ 0.96
CCS-209ENST00000534763 RAPGEF6Q8TEU7 1601 aa21.04■□□□□ 0.96
CCS-209ENST00000534763 GLI2P10070 1586 aa21.03■□□□□ 0.96
CCS-209ENST00000534763 ATP10BO94823 1461 aa21.01■□□□□ 0.95
CCS-209ENST00000534763 WDR7Q9Y4E6 1490 aa21.01■□□□□ 0.95
CCS-209ENST00000534763 FMN1Q68DA7 1419 aa21.01■□□□□ 0.95
CCS-209ENST00000534763 EPRSP07814 1512 aaKnown RBP20.99■□□□□ 0.95
CCS-209ENST00000534763 NUP153P49790 1475 aaKnown RBP20.99■□□□□ 0.95
CCS-209ENST00000534763 CLIP1P30622 1438 aa20.91■□□□□ 0.94
CCS-209ENST00000534763 MAP3K4Q9Y6R4 1608 aa20.89■□□□□ 0.93
CCS-209ENST00000534763 ARID3CA6NKF2 412 aa20.87■□□□□ 0.93
CCS-209ENST00000534763 HECW1Q76N89 1606 aa20.86■□□□□ 0.93
CCS-209ENST00000534763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.86■□□□□ 0.93
CCS-209ENST00000534763 HNRNPUL2Q1KMD3 747 aaKnown RBP20.86■□□□□ 0.93
CCS-209ENST00000534763 PLEKHD1A6NEE1 506 aa20.85■□□□□ 0.93
CCS-209ENST00000534763 KCNH8Q96L42 1107 aa20.85■□□□□ 0.93
CCS-209ENST00000534763 TEX14Q8IWB6 1497 aa20.84■□□□□ 0.93
CCS-209ENST00000534763 CASKIN1Q8WXD9 1431 aa20.83■□□□□ 0.93
CCS-209ENST00000534763 MAGI3Q5TCQ9 1506 aa20.83■□□□□ 0.92
CCS-209ENST00000534763 CFAP43Q8NDM7 1665 aa20.83■□□□□ 0.92
CCS-209ENST00000534763 CD109Q6YHK3 1445 aa20.82■□□□□ 0.92
CCS-209ENST00000534763 PPRC1Q5VV67 1664 aaKnown RBP20.81■□□□□ 0.92
CCS-209ENST00000534763 CEP162Q5TB80 1403 aa20.8■□□□□ 0.92
CCS-209ENST00000534763 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
CCS-209ENST00000534763 ABCA9Q8IUA7 1624 aa20.78■□□□□ 0.92
CCS-209ENST00000534763 TSPOAP1O95153 1857 aa20.78■□□□□ 0.92
CCS-209ENST00000534763 CDK13Q14004 1512 aaKnown RBP20.78■□□□□ 0.92
CCS-209ENST00000534763 FYCO1Q9BQS8 1478 aa20.77■□□□□ 0.92
CCS-209ENST00000534763 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
CCS-209ENST00000534763 ATP1B4Q9UN42 357 aaPredicted RBP20.76■□□□□ 0.91
CCS-209ENST00000534763 CCDC18Q5T9S5 1454 aa20.75■□□□□ 0.91
CCS-209ENST00000534763 KDM6BO15054 1643 aa20.75■□□□□ 0.91
CCS-209ENST00000534763 PCF11O94913 1555 aaKnown RBP20.74■□□□□ 0.91
CCS-209ENST00000534763 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
CCS-209ENST00000534763 TROQ12816 1431 aaPredicted RBP20.69■□□□□ 0.9
CCS-209ENST00000534763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.68■□□□□ 0.9
CCS-209ENST00000534763 NEO1Q92859 1461 aa20.67■□□□□ 0.9
CCS-209ENST00000534763 LRRIQ1Q96JM4 1722 aa20.66■□□□□ 0.9
CCS-209ENST00000534763 COL17A1Q9UMD9 1497 aaPredicted RBP20.65■□□□□ 0.9
CCS-209ENST00000534763 ARAP3Q8WWN8 1544 aa20.64■□□□□ 0.9
CCS-209ENST00000534763 KIF14Q15058 1648 aa20.61■□□□□ 0.89
CCS-209ENST00000534763 TTC37Q6PGP7 1564 aa20.61■□□□□ 0.89
CCS-209ENST00000534763 PLCH2O75038 1416 aa20.61■□□□□ 0.89
CCS-209ENST00000534763 VPS8Q8N3P4 1428 aa20.58■□□□□ 0.88
CCS-209ENST00000534763 CFAP74Q9C0B2 1584 aa20.58■□□□□ 0.88
CCS-209ENST00000534763 FANCAO15360 1455 aa20.57■□□□□ 0.88
CCS-209ENST00000534763 AKNAQ7Z591 1439 aa20.53■□□□□ 0.88
CCS-209ENST00000534763 EFCAB2Q5VUJ9 269 aa20.52■□□□□ 0.88
CCS-209ENST00000534763 MYO5CQ9NQX4 1742 aa20.5■□□□□ 0.87
CCS-209ENST00000534763 MTUS2Q5JR59 1369 aa20.5■□□□□ 0.87
CCS-209ENST00000534763 DENND4BO75064 1496 aaPredicted RBP20.49■□□□□ 0.87
CCS-209ENST00000534763 MAP3K1Q13233 1512 aa20.48■□□□□ 0.87
CCS-209ENST00000534763 EHBP1L1Q8N3D4 1523 aa20.47■□□□□ 0.87
CCS-209ENST00000534763 RAPGEF3O95398 923 aa20.45■□□□□ 0.86
CCS-209ENST00000534763 ADGRL1O94910 1474 aa20.44■□□□□ 0.86
CCS-209ENST00000534763 ARHGAP5Q13017 1502 aa20.44■□□□□ 0.86
CCS-209ENST00000534763 TIAM1Q13009 1591 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms