RNA–Protein interactions for RNA: ENST00000534726.5

SNX19-213, Transcript of sorting nexin 19, humanhuman

TSL 1 (best) BASIC

Gene SNX19, Length 1,656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-213ENST00000534726 SNAPC4Q5SXM2 1469 aa22.26■■□□□ 1.15
SNX19-213ENST00000534726 SYNJ2O15056 1496 aa22.24■■□□□ 1.15
SNX19-213ENST00000534726 ARAP1Q96P48 1450 aa22.23■■□□□ 1.15
SNX19-213ENST00000534726 APLP2Q06481 763 aa22.22■■□□□ 1.15
SNX19-213ENST00000534726 RANGAP1P46060 587 aaPredicted RBP22.2■■□□□ 1.14
SNX19-213ENST00000534726 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
SNX19-213ENST00000534726 CHMP7Q8WUX9 453 aaPredicted RBP22.17■■□□□ 1.14
SNX19-213ENST00000534726 KIAA0586Q9BVV6 1533 aa22.16■■□□□ 1.14
SNX19-213ENST00000534726 IQGAP2Q13576 1575 aa22.14■■□□□ 1.13
SNX19-213ENST00000534726 SAMD9Q5K651 1589 aa22.12■■□□□ 1.13
SNX19-213ENST00000534726 FMN1Q68DA7 1419 aa22.11■■□□□ 1.13
SNX19-213ENST00000534726 MAP3K1Q13233 1512 aa22.1■■□□□ 1.13
SNX19-213ENST00000534726 UGGT2Q9NYU1 1516 aa22.08■■□□□ 1.13
SNX19-213ENST00000534726 PCGF6Q9BYE7 350 aa22.08■■□□□ 1.13
SNX19-213ENST00000534726 NUP160Q12769 1436 aa22.07■■□□□ 1.12
SNX19-213ENST00000534726 CASKIN1Q8WXD9 1431 aa22.01■■□□□ 1.11
SNX19-213ENST00000534726 FYCO1Q9BQS8 1478 aa22■■□□□ 1.11
SNX19-213ENST00000534726 FHOD3Q2V2M9 1422 aa21.99■■□□□ 1.11
SNX19-213ENST00000534726 FBLN2P98095 1184 aa21.99■■□□□ 1.11
SNX19-213ENST00000534726 CEP170Q5SW79 1584 aa21.97■■□□□ 1.11
SNX19-213ENST00000534726 P3H3Q8IVL6 736 aa21.95■■□□□ 1.1
SNX19-213ENST00000534726 CARMIL2Q6F5E8 1435 aa21.92■■□□□ 1.1
SNX19-213ENST00000534726 PPARGC1BQ86YN6 1023 aaKnown RBP21.91■■□□□ 1.1
SNX19-213ENST00000534726 JPH4Q96JJ6 628 aa21.91■■□□□ 1.1
SNX19-213ENST00000534726 TIAM1Q13009 1591 aa21.89■■□□□ 1.1
SNX19-213ENST00000534726 KIAA0556O60303 1618 aa21.89■■□□□ 1.09
SNX19-213ENST00000534726 PCF11O94913 1555 aaKnown RBP21.89■■□□□ 1.09
SNX19-213ENST00000534726 DISP1Q96F81 1524 aa21.89■■□□□ 1.09
SNX19-213ENST00000534726 CHD1O14646 1710 aa21.85■■□□□ 1.09
SNX19-213ENST00000534726 CFAP43Q8NDM7 1665 aa21.83■■□□□ 1.09
SNX19-213ENST00000534726 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.08
SNX19-213ENST00000534726 LRRC9Q6ZRR7 1453 aa21.82■■□□□ 1.08
SNX19-213ENST00000534726 KANK4Q5T7N3 995 aaPredicted RBP21.8■■□□□ 1.08
SNX19-213ENST00000534726 HECW1Q76N89 1606 aa21.8■■□□□ 1.08
SNX19-213ENST00000534726 ATP1B4Q9UN42 357 aaPredicted RBP21.77■■□□□ 1.08
SNX19-213ENST00000534726 SHROOM2Q13796 1616 aa21.75■■□□□ 1.07
SNX19-213ENST00000534726 TTBK1Q5TCY1 1321 aaPredicted RBP21.72■■□□□ 1.07
SNX19-213ENST00000534726 PRG4Q92954 1404 aaPredicted RBP21.71■■□□□ 1.07
SNX19-213ENST00000534726 RRBP1Q9P2E9 1410 aaKnown RBP21.7■■□□□ 1.06
SNX19-213ENST00000534726 MTUS2Q5JR59 1369 aa21.69■■□□□ 1.06
SNX19-213ENST00000534726 EPRSP07814 1512 aaKnown RBP21.69■■□□□ 1.06
SNX19-213ENST00000534726 CLASP1Q7Z460 1538 aa21.69■■□□□ 1.06
SNX19-213ENST00000534726 RAPGEF6Q8TEU7 1601 aa21.69■■□□□ 1.06
SNX19-213ENST00000534726 CDK11AQ9UQ88 783 aaPredicted RBP21.68■■□□□ 1.06
SNX19-213ENST00000534726 EHBP1L1Q8N3D4 1523 aa21.66■■□□□ 1.06
SNX19-213ENST00000534726 PTPRGP23470 1445 aa21.63■■□□□ 1.05
SNX19-213ENST00000534726 LRRIQ1Q96JM4 1722 aa21.62■■□□□ 1.05
SNX19-213ENST00000534726 CCNB3Q8WWL7 1395 aa21.62■■□□□ 1.05
SNX19-213ENST00000534726 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.61■■□□□ 1.05
SNX19-213ENST00000534726 NUP153P49790 1475 aaKnown RBP21.61■■□□□ 1.05
SNX19-213ENST00000534726 ABCA8O94911 1581 aa21.6■■□□□ 1.05
SNX19-213ENST00000534726 SUPT6HQ7KZ85 1726 aaKnown RBP21.58■■□□□ 1.05
SNX19-213ENST00000534726 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
SNX19-213ENST00000534726 PLB1Q6P1J6 1458 aa21.56■■□□□ 1.04
SNX19-213ENST00000534726 PHLDB1Q86UU1 1377 aa21.54■■□□□ 1.04
SNX19-213ENST00000534726 ARHGEF11O15085 1522 aa21.52■■□□□ 1.04
SNX19-213ENST00000534726 NCOA2Q15596 1464 aa21.52■■□□□ 1.04
SNX19-213ENST00000534726 HRCP23327 699 aa21.52■■□□□ 1.04
SNX19-213ENST00000534726 ZEB1P37275 1124 aaPredicted RBP21.52■■□□□ 1.04
SNX19-213ENST00000534726 UACAQ9BZF9 1416 aa21.51■■□□□ 1.03
SNX19-213ENST00000534726 CDK13Q14004 1512 aaKnown RBP21.5■■□□□ 1.03
SNX19-213ENST00000534726 MYOM3Q5VTT5 1437 aa21.49■■□□□ 1.03
SNX19-213ENST00000534726 TROQ12816 1431 aaPredicted RBP21.47■■□□□ 1.03
SNX19-213ENST00000534726 MAGI3Q5TCQ9 1506 aa21.47■■□□□ 1.03
SNX19-213ENST00000534726 MIA2Q96PC5 1412 aa21.47■■□□□ 1.03
SNX19-213ENST00000534726 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
SNX19-213ENST00000534726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.47■■□□□ 1.03
SNX19-213ENST00000534726 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
SNX19-213ENST00000534726 FGD6Q6ZV73 1430 aa21.46■■□□□ 1.03
SNX19-213ENST00000534726 UHRF1BP1LA0JNW5 1464 aa21.46■■□□□ 1.03
SNX19-213ENST00000534726 ATP10BO94823 1461 aa21.44■■□□□ 1.02
SNX19-213ENST00000534726 ABCC2Q92887 1545 aa21.43■■□□□ 1.02
SNX19-213ENST00000534726 ADCY10Q96PN6 1610 aa21.4■■□□□ 1.02
SNX19-213ENST00000534726 ERCC6L2Q5T890 1561 aa21.39■■□□□ 1.02
SNX19-213ENST00000534726 TCOF1Q13428 1488 aaKnown RBP21.37■■□□□ 1.01
SNX19-213ENST00000534726 FAM50AQ14320 339 aaKnown RBP21.37■■□□□ 1.01
SNX19-213ENST00000534726 ARID3CA6NKF2 412 aa21.34■■□□□ 1.01
SNX19-213ENST00000534726 PTPN23Q9H3S7 1636 aa21.32■■□□□ 1
SNX19-213ENST00000534726 KDM5BQ9UGL1 1544 aa21.32■■□□□ 1
SNX19-213ENST00000534726 KIF14Q15058 1648 aa21.32■■□□□ 1
SNX19-213ENST00000534726 CCER1Q8TC90 406 aaPredicted RBP21.31■■□□□ 1
SNX19-213ENST00000534726 ITSN2Q9NZM3 1697 aa21.31■■□□□ 1
SNX19-213ENST00000534726 ACIN1Q9UKV3 1341 aaKnown RBP21.28■■□□□ 1
SNX19-213ENST00000534726 CLSPNQ9HAW4 1339 aa21.26■□□□□ 0.99
SNX19-213ENST00000534726 GPATCH8Q9UKJ3 1502 aaKnown RBP21.25■□□□□ 0.99
SNX19-213ENST00000534726 SETD5Q9C0A6 1442 aa21.24■□□□□ 0.99
SNX19-213ENST00000534726 ABCC10Q5T3U5 1492 aa21.24■□□□□ 0.99
SNX19-213ENST00000534726 CFDP1Q9UEE9 299 aaPredicted RBP21.24■□□□□ 0.99
SNX19-213ENST00000534726 ITGAEP38570 1179 aa21.23■□□□□ 0.99
SNX19-213ENST00000534726 ZCCHC11Q5TAX3 1644 aaKnown RBP21.2■□□□□ 0.98
SNX19-213ENST00000534726 AKNAQ7Z591 1439 aa21.2■□□□□ 0.98
SNX19-213ENST00000534726 HFM1A2PYH4 1435 aa21.17■□□□□ 0.98
SNX19-213ENST00000534726 RSPH4AQ5TD94 716 aa21.16■□□□□ 0.98
SNX19-213ENST00000534726 NPM1P06748 294 aaKnown RBP eCLIP21.15■□□□□ 0.98
SNX19-213ENST00000534726 ROCK1Q13464 1354 aa21.15■□□□□ 0.98
SNX19-213ENST00000534726 RAB3GAP2Q9H2M9 1393 aa21.15■□□□□ 0.98
SNX19-213ENST00000534726 CDC42BPAQ5VT25 1732 aa21.14■□□□□ 0.97
SNX19-213ENST00000534726 DNMT1P26358 1616 aaKnown RBP21.13■□□□□ 0.97
SNX19-213ENST00000534726 CAMSAP2Q08AD1 1489 aa21.12■□□□□ 0.97
SNX19-213ENST00000534726 DAPK1P53355 1430 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms